KEGG   Arvicanthis niloticus (African grass rat): 117693751
Entry
117693751         CDS       T08817                                 
Symbol
Trim42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
anu  Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:anu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:anu01009]
    117693751 (Trim42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:anu04121]
    117693751 (Trim42)
Protein phosphatases and associated proteins [BR:anu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117693751 (Trim42)
Ubiquitin system [BR:anu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    117693751 (Trim42)
SSDB
Motif
Pfam: zf-B_box fn3 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C CHDCT2
Other DBs
NCBI-GeneID: 117693751
NCBI-ProteinID: XP_034340391
LinkDB
Position
21:complement(17807032..17827284)
AA seq 723 aa
METAMCVCSPCCTWQRCCPRLFSCLCCKFIFTSERNCTCFPCPYKDERNCQFCHCTCAEN
PNCHWCCCSWANDPNCKCCCTASTNLRCYYYESRCCRNVTITFRKGRLRSIRTASKTALR
VGGSDTQLDEPKTMPARSHLVSHLTCPMCNRLRLHSFMLPCNHSLCEKCLRQLQKHAEVT
ENFFILICPMCNRSHCMPYSHQMHLPENYLRGRLTKRYMQQHGYLKWRFDRSSGPILCQV
CRTRRIAYKRCLTCRLNLCNDCLKAFHSDVAMQDHIFVDSSAEDQDEKICIHHPSSRINE
YCRSDNQLLCAFCKIAFHNGHDTVSLIDACSERSAALFSAIAKFKAVRYEIDNDLMEFNI
LKSSFKADKEAKRKDVRNGFLKLRAILQEKEKIIMEQIENLEVSRQKEIEKYVYITTMKV
NEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEEGIQNTFRPDPQLRLHSLQCIPLDFV
ELSSAIHELFPTGPKKTCSSGDSLPAQYPVHSEMMIARKVTFSTHSFNNQQIYQRSSSLM
SFNTANDKGKMGLENYGRAQSAAPAKTTDGLYTYWSATGETQPPQSSNSFHNWYSFNDTS
VRTPGPIVIYQTLVYPRAAKVYWTCPTEDVDSFEMEFYELITTPPNNVRTELCGQIRDIL
QQNLELHNLTPNTEYLFKVRAINDNGPGQWSDICKVVTPDGRGKNRAKWGLLKNIQSALQ
KRF
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggagacggctatgtgtgtctgttctccatgctgcacctggcagagatgctgccctcga
ctattctcctgtctatgctgcaagttcatcttcacctccgagcggaactgcacctgcttc
ccctgcccctacaaggatgagcggaactgccagttctgccactgcacctgcgcagagaac
cccaattgccactggtgctgctgctcctgggccaatgaccccaactgtaagtgctgttgc
acagccagcaccaatctgaggtgctactactatgagagccgctgctgccgcaatgtcacc
atcacattcagaaagggtcgccttcgaagcatccgcactgcctctaagaccgccctccgc
gtggggggcagcgatactcagctggatgagcccaagaccatgcccgccaggagccacctg
gtgagccacctcacctgccccatgtgcaaccggctgcgcctgcactccttcatgctgccc
tgcaaccacagcctgtgcgagaagtgcctgcggcagctgcaaaaacacgccgaggtcact
gagaatttcttcatcctcatctgccccatgtgcaaccgctcgcactgcatgccctacagc
caccagatgcacctgccagaaaactacctgcgcgggcgcctcaccaaacgctacatgcag
cagcacggctacctcaagtggcgcttcgaccgttcctcggggcccatcctctgccaggtg
tgccgcacccggcgcattgcctacaagcgctgtctcacctgtcgcctcaacctgtgcaac
gactgtctcaaggccttccactcagatgtggccatgcaggaccacatcttcgtggacagc
agcgccgaggaccaggacgagaagatttgcatccaccatccatccagccgcatcaacgag
tactgccgcagcgacaaccagctactctgcgccttctgcaagatcgctttccacaatggc
catgacacggtcagcctcatagatgcctgctccgagaggtctgctgccctcttcagcgcc
atcgccaagttcaaagcagtccgatatgaaatcgataacgacctgatggagttcaacatt
ctaaagagcagctttaaagctgacaaggaagcaaagaggaaggatgtccggaatggattc
ctcaaactgcgagccatccttcaagagaaagagaagatcatcatggaacagatagagaat
ctggaagtgtccaggcagaaagaaattgagaaatatgtgtacattacaaccatgaaagtg
aacgaaatggatggtctgattgcttactccaaggaagccctgaaggaaaccggccaggtg
gccttcctgcagtctgccaagatcctggtggaccagattgaggagggcatccagaacacc
ttcaggcctgaccctcagctgcggcttcactctctacaatgcatccccttggattttgtt
gagctctccagtgccatccacgagctctttcccacaggacccaaaaagacttgctcctca
ggggactcactcccagcccagtaccctgtccactcagaaatgatgatcgccaggaaggtg
acattcagcacccacagcttcaacaaccagcagatataccagcggagctcttccctgatg
tccttcaacaccgccaatgacaagggcaagatgggtctggagaactatgggagagcccag
tctgccgcgcccgccaaaacgactgatggactttacacctactggagtgccacaggggaa
acccagcctccgcaaagcagcaacagcttccacaactggtattccttcaacgacacctct
gtgaggaccccaggcccaattgtcatctaccagactctggtgtacccaagagccgccaag
gtttactggacatgcccaacagaagatgtggactcctttgagatggaattctatgagctc
attactacccctcctaataatgtgcgcacagagctctgtggacaaatccgtgacatcctg
cagcagaacctagagctacacaacctgacccccaacaccgagtatttgtttaaggttaga
gccatcaatgataatggtcccgggcagtggagtgacatctgcaaggtggtaacaccagat
gggcgtgggaagaaccgagctaagtggggactgctgaagaatatccagtctgccctccag
aagcgcttctga

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