Arvicanthis niloticus (African grass rat): 117693778
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Entry
117693778 CDS
T08817
Symbol
Zic1
Name
(RefSeq) zinc finger protein ZIC 1
KO
K09224
zinc finger protein ZIC 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117693778 (Zic1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
117693778 (Zic1)
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GFIT
Motif
Pfam:
zf_ZIC
zf-C2H2_15
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_8
zf-C2H2_jaz
zf-met
Zap1_zf1
zf-C2H2_16
Motif
Other DBs
NCBI-GeneID:
117693778
NCBI-ProteinID:
XP_034340418
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Position
21:complement(12287102..12292266)
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AA seq
447 aa
AA seq
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MLLDAGPQYPAIGVTTFGASRHHSAGDVADRDVGLGINPFADGMGAFKLNPSSHELASAG
QTAFTSQAPGYAAAAALGHHHHPGHVGSYSSAAFNSTRDFLFRNRGFGDAAAAASAQHSL
FAASAGGFGGPHGHTDAAGHLLFSGLHEQAAGHASPNVVNGQMRLGFSGDMYPRPEQYGQ
VTSPRSEHYAAPQLHGYGPMNVNMAAHHGAGAFFRYMRQPIKQELICKWIEPEQLANPKK
SCNKTFSTMHELVTHVTVEHVGGPEQSNHICFWEECPREGKPFKAKYKLVNHIRVHTGEK
PFPCPFPGCGKVFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK
PYLCKMCDKSYTHPSSLRKHMKVHESSSQGSQPSPAASSGYESSTPPTIVSPTTDNPTTS
SMSPSSSAVHHTAGHSALSSNFNEWYV
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgctcctggacgccggaccccagtatcccgcgatcggtgtgaccacctttggtgcatcc
cggcaccactcggcgggcgacgtggccgacagagacgtgggcctgggtatcaacccgttc
gccgacggcatgggcgccttcaagctcaaccccagttcgcacgaactggcctcggccggc
cagacagccttcacgtcgcaggctcccggctacgccgctgctgcggccctgggccaccat
caccaccccggccacgtcggctcctactccagcgctgctttcaattctacccgggacttt
ttgttccgcaaccggggctttggcgacgcggcggcggcagctagcgcccagcacagtctc
ttcgctgcttcggccggcggcttcgggggcccacacggccatacggacgccgcgggccac
ctccttttttctgggcttcacgagcaggcggctggccacgcttcgcccaacgtggttaac
gggcagatgcggctaggtttctccggggacatgtacccacggccggagcaatacggccag
gtgaccagcccacgatccgagcactatgccgcaccgcagcttcacggctacgggcccatg
aacgtgaacatggctgcacatcacggcgctggagccttcttccgctatatgcgccaaccc
atcaagcaagagcttatctgtaaatggatcgagcccgagcagctggccaaccccaaaaag
tcgtgcaacaaaactttcagcaccatgcacgagctggtcacgcacgtcacggtggagcac
gtcggcggcccagagcagagtaatcacatctgcttttgggaggagtgtccacgcgagggc
aagcccttcaaagccaaatacaaactggtcaaccacatccgagtgcacacgggcgaaaag
ccttttccctgcccgtttcctggctgcggcaaggttttcgcgcgttcagagaacctcaag
atccacaaaaggacgcacacaggggagaagcccttcaagtgcgagttcgagggctgcgac
cggcgcttcgccaacagcagcgaccgcaagaagcacatgcacgtgcacactagcgacaag
ccctacctttgcaagatgtgcgataagtcctacacgcaccccagctctctgcgcaaacac
atgaaggtccacgagtcctcttctcagggctcacagccttcgcccgccgccagctccggg
tatgagtcctccacgccacccaccatcgtgtctcccaccacagacaacccgaccaccagc
tccatgtcgccctcttcctccgcggtccaccacacagccggccacagcgcgctctcttcc
aattttaacgaatggtacgtttaa
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