Arvicanthis niloticus (African grass rat): 117693802
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Entry
117693802 CDS
T08817
Symbol
Myom1
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117693802 (Myom1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
anu04990
]
117693802 (Myom1)
Domain-containing proteins not elsewhere classified [BR:
anu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117693802 (Myom1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
Tissue_fac
C2-set_2
C2-set_3
Ig_6
Motif
Other DBs
NCBI-GeneID:
117693802
NCBI-ProteinID:
XP_034340447
LinkDB
All DBs
Position
21:complement(46412005..46539118)
Genome browser
AA seq
1665 aa
AA seq
DB search
MSLPFYQRSHQHYDLGYRNKDLHTTMSHYQQEKKRSAVYTHGSTAYSSRSSAAHRQESQA
FSQASAASYQQQASQAYSLGTSSSLHSQGSEVSRKTASAYDYGYSHGLTDSSLLLEDYSS
KLSPQTKRAKRSLLSGEETRNLPGNYMVPLYSGRQVHMGGIRDSEEERIKEAAAYIAQRT
LLASEEAIAASKQTTASKQATASKQTTSTFQQEETFEKKSRNIAIREKAEELSLRKTLEE
TQAYHGKLNEDHLLHAPEFIIKPRSHTVWEKENVKLHCSVAGWPEPRLTWYKNQVPINVH
ANSGKYIIESRYGMHTLEISKCDFEDTAQYRASAMNVQGELSAYASVVVKRYKGELDDSV
LRGGASMPLSFAVTPYGYASKFEIHFDDKFDVSFGREGETMSLGCRVVITPEIKQFQPEV
QWYRNGAPVSPSKWVQPHWSGDRATLTFSHLNKEDEGLYTIRVRMGEYYEQYSAYVFVRD
ADAEIEGAPAAPLDVVSLDANKDYIIISWKQPAVDGGSPILGYFIDKCEVGTDTWSQCND
TPVKFARFPVTGLIEGRSYIFRVRAVNKTGIGLPSRVSEPVAALDPAEKARLKSRPSAPW
TGQIIVTEEEPTEGVIPGPPTDLSVTEATRSYVVLSWKPPGQRGHEGIMYFVEKCDVGTE
NWQRVNTELPVKSPRFALFDLVEGKSYRFRVRCSNSAGVGEPSETTEVTVVGDKLDIPKA
PGKIIPSRNTDTSVVVSWEESKDAKELVGYYIECSVVGSGEWEPCNNNPVKGSRFTCHGL
TTGQSYIFRVRAVNAAGLSEYSQDSEAIEVKAAIGGGVSPDVWPRLSDTPGGLTDSRGGM
NGASPPTFQKDALLSSKPNKPSPPSSPSSRGQKEVSKVSESVQEELSPPSQEVAPQEQSK
SEPPKKKKDPVAVPSPPYDIACLESFRDSMVLGWKQPDTTGGAEITGYYVNYREVVGGVP
GKWREANIKAVSDAAYKISNLKENTVYQFQVSAMNIAGLGAPSAVSECFKCEEWTIAVPG
PPHSLKISEVRKNSLVLQWKPPLYSGRTPVTGYFVDLKEASAKDDQWRGLNEAAIANKYL
RVQGLKEGVSYVFRVRAINQAGVGKPSDLAGPVVAETRPGTKEVVVNVDDDGVISLNFEC
DQMTPKSEFVWSKDYVPTEDSPRLEVESKGTKTKMTFKDLGADDLGTYSCDVTDTDGIAS
SYLIDEEEMKRLLALSQEHKFPIVPTKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFN
EKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQIQDGKATGHSTLVLIGDVYKK
LQKEAEFQRQEWIRKQGPHFAEYLSWEVTGECNVLLKCKVANITKDTHIVWYKDEREISV
DEKHDFKDGICTLLITEFSKKDAGFYEVILKDDRGKDKSRLKLVDEAFQDLMTEVCRKIA
LSATDLKIQSTAEGIRLYSFVCYYLDDLKVNWSHNGAGIKYTDRVKSGVTGEQIWLQINE
PTPNDKGKYVMELFDGKTGHQKTVDLSGQAFDEAFAEFQRLKQAAIAEKNRARVLGGLPD
VVTIQEGKALNLTCNVWGDPTPEVSWLKNEKPLTSDDHCSLRFEAGKTAFFTISGVSTAD
SGKYGLVVKNKYGSETSDFTVSVFIPEEEARKGASEPPKGNQTSK
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcctttttatcagagatcccaccagcattatgatctcggttaccggaacaag
gaccttcacaccaccatgagccactaccaacaggagaagaagcgctctgccgtctacacc
catggctccactgcttacagcagccgttcctcggcagctcaccgccaggagtcacaggcc
tttagtcaagcatcagccgcctcctaccagcagcaggcctcacaggcttacagtctggga
acatcctcctccctgcattctcaagggtctgaagttagccggaagacagcctctgcatat
gattatggctattcccacggacttacagattccagtctgctattagaagattattcatca
aagttgagcccccaaacaaagagagccaagcggagccttctgtctggagaggagactaga
aacctgccaggcaactacatggtgcctctttactctggacggcaagtacatatgggtgga
atcagagactcagaagaagaaagaattaaagaggctgctgcttacatagctcagaggact
cttcttgcgagtgaagaagcaattgcagcctccaagcagaccacagcctccaagcaggcc
acagcctccaagcagaccacgtccacctttcagcaagaagaaacgtttgaaaagaagtcg
aggaacattgcaatccgagaaaaggcggaagagctgtcactgaggaaaacattagaagag
acccaagcataccatggaaagctaaatgaagaccacctccttcatgctcccgagtttatc
attaaacctcgttctcacacagtttgggagaaggagaacgtgaagctgcactgctccgta
gcaggctggccagaacctcgcctcacgtggtataagaaccaggtgcctataaatgtccat
gcgaactcgggaaagtacatcattgaaagtcgatatggaatgcatactcttgagattagc
aagtgtgactttgaagacacggctcagtaccgggcctcggcgatgaatgttcaaggcgag
ctctcagcatatgcctcagttgtggtgaagagatataagggagagttggacgactctgtc
ctccgtggtggggcttccatgcctctcagctttgctgtgaccccttacggttatgcatcc
aagtttgagatccacttcgatgacaagtttgatgtgtcttttgggagagaaggagagacc
atgagtctgggctgtcgtgtggtcattactcctgaaattaaacagttccagccagaggtc
cagtggtatagaaatggagcacctgtctctccatcaaaatgggtgcagccgcactggagt
ggagaccgggcaacactcacgttctctcacctcaacaaagaagatgaaggcctctacaca
atccgagtgcgaatgggagagtattacgaacagtacagtgcttatgtctttgttcgagat
gctgatgcagagatcgaaggagcccccgccgcacccttggatgtggtgtctttggatgcg
aacaaggattacatcatcatctcttggaagcagccagctgtggatggagggagccctatc
ctgggatactttattgataagtgtgaggtgggcacagatacctggtctcagtgcaatgac
acacccgtgaagtttgctcggtttccagtcactggtttgatagaaggtcgttcctacata
ttccgggtccgcgcggtgaataaaactggaataggcctgccgtctcgagtttctgagccc
gtggctgctctggatccagctgagaaagctaggcttaaaagtcgtccttcagcaccttgg
actggacagatcattgtcaccgaagaggaacctacagagggtgtcattcctgggcccccc
acagacctctctgtcactgaggccactcggagctatgtggtgctgagctggaagccccct
gggcagcgaggccatgagggcattatgtactttgtagaaaagtgtgacgtgggaacagaa
aactggcagcgtgtcaacacagaactcccagtgaagtctcctcgctttgctctgtttgac
ctggtggaggggaaatcttaccgcttccgtgtccgctgctcaaattcagcaggagttggt
gaaccctcagaaacaactgaagtgaccgtcgtaggggacaaacttgatatccccaaagcc
cctggcaaaatcatcccaagtagaaatacagatacctcggtggtggtttcttgggaggag
tccaaggatgccaaagaactggttgggtactacattgagtgcagtgtggttggctctggc
gagtgggagccctgcaacaacaacccggtgaagggctcacgatttacttgccatggattg
acaactggtcagagctatattttccgggtcagagcagtgaacgcagctggactgagtgaa
tattcccaggattcggaagctattgaagtcaaagccgctattgggggaggagtgtctcca
gatgtgtggcctcgactgagtgatacgcctggtggactaacagactccagggggggcatg
aatggagcctccccaccaacctttcagaaagatgctttgctcagtagcaaacccaataaa
ccttcaccacccagtagcccttccagccggggccagaaagaagtaagtaaagtaagtgaa
tcagttcaggaggagctcagcccaccgtcccaggaggtagctccccaggagcaaagcaaa
tctgagcctccaaaaaagaagaaggatccagtagccgtgccatctccaccctatgacatc
gcttgtcttgaaagtttccgggactcaatggttcttggatggaagcagccagatacgacc
ggaggggcagagataacaggctattatgtgaactatcgagaggtggttggtggggtacca
ggaaaatggagggaagccaacatcaaggccgtcagcgatgcagcatacaagatcagtaac
ttgaaggaaaacacagtgtaccagttccaagtgtcagccatgaacatcgcagggctggga
gcaccctccgcggtgagcgagtgcttcaagtgtgaagaatggaccattgctgttccggga
ccaccacacagcctgaaaatcagtgaagtcaggaagaactccctggttctgcagtggaag
cctccgctctactcaggccggactccagtcaccggttactttgtggacctgaaggaagcc
agtgccaaagatgaccaatggcgaggacttaatgaggcagccattgcgaacaagtacctg
cgggtacaaggcctcaaagagggtgtcagctacgtgttccgtgtgcgtgccatcaaccag
gcaggcgttggaaagccttctgacctcgctggacctgttgtggctgaaacccgtccaggt
accaaggaggttgttgtgaatgtggatgatgacggggtcatttccttgaactttgaatgt
gatcagatgactcccaagtcagaattcgtctggtccaaagattatgtacctactgaagac
tctccaagattagaagtcgaaagcaaaggcactaagacaaaaatgaccttcaaagacctt
ggggcagacgacttgggcacctattcttgtgatgtgacagacactgatggcatagcatca
agctacctgatagatgaggaagaaatgaaacgtctgctcgccctcagccaggagcacaag
ttcccgattgtcccaactaagtcagagttggcagttgaaattttggagaaaggtcaggtt
cggttttggatgcaggctgagaagctgtctggaaatgccaaagtcaactacatatttaat
gagaaggaaatttttgaggggccgaaatataagatgcacattgaccggaacacgggcatc
attgaaatgttcatggagaagctacaggatgaggacgaagggacgtacacattccagatt
caagatggaaaagctaccggccattctactcttgttctcattggagatgtttataagaag
ctacagaaagaagctgaattccagcgacaagaatggatcaggaaacaaggcccacatttc
gctgagtatctgagctgggaagtgactggtgaatgtaatgtcctgttgaaatgcaaggtg
gcaaatattacaaaagacactcacattgtgtggtacaaagatgaacgggagatctctgtg
gatgagaaacatgactttaaagatggcatttgtaccctgctcatcacagagttttccaag
aaagatgctggattttatgaagttatcctgaaagatgaccgaggaaaagataagagcaga
ctgaaactcgtggatgaagccttccaagacttgatgactgaagtatgcagaaagatagct
ttgtctgccacagacctgaaaatccagagcacggcggagggcatccggctgtactccttt
gtctgttattacctggatgacttgaaagtaaactggtcccacaatggggctgggattaag
tacacggacagagtcaagagcggagtcaccggggagcagatctggctgcagatcaatgag
cccactccgaatgataaagggaaatatgtaatggagctctttgatggcaagactgggcac
cagaagacggtggatctctcgggacaagcgtttgatgaagcctttgctgaattccagagg
ttaaaacaagccgccattgctgaaaaaaatcgggcccgggtgttgggtggtctccccgat
gttgtcaccattcaagagggcaaggcacttaatctcacttgcaatgtgtggggtgacccg
acgcctgaggtgtcctggctgaaaaatgagaagccactgacctccgatgatcactgcagc
ctcaggtttgaggctgggaagactgcgttcttcaccatctcaggtgtgagcacggcagac
tctggcaagtacgggctggtggtgaagaacaaatacggctcggagaccagcgacttcacc
gttagtgtgttcatcccggaggaggaggcaagaaaaggagcatcagagccccccaagggc
aaccaaacgtccaagtga
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integrated database retrieval system
