Arvicanthis niloticus (African grass rat): 117693976
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Entry
117693976 CDS
T08817
Symbol
Mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117693976 (Mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117693976 (Mid1)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117693976 (Mid1)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117693976 (Mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
zf-RING_2
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
NDNF
U-box
Motif
Other DBs
NCBI-GeneID:
117693976
NCBI-ProteinID:
XP_034340586
LinkDB
All DBs
Position
X:complement(19265879..19605503)
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AA seq
667 aa
AA seq
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METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR
HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMSSAEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIA
NCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVISLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCNNNWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSIAFYDALNSIHLYTFDVALAQPVCPTFTVWNKCLTIITGLPIPDHL
DCTEQLP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgtcctatttgtctggagctttttgaggaccct
ctcctgcttccctgtgcacatagcctctgcttcaactgtgctcaccgcatcctggtctct
cactgtgccaccaacgagcctgtggagtccatcaacgccttccagtgccccacctgccgg
catgtcatcacgctcagccagcgaggtctagacgggctcaagcgcaacgtcaccctacaa
aacatcattgacaggtttcagaaagcatctgtgagcgggcctaattctcccagtgagacc
cgcagggagcgggcctttgacgccaacaccatgtcctctgccgagaaggttctctgccag
ttctgtgaccaggatcctgcccaggatgctgtgaagacctgtgttacttgcgaagtgtcc
tactgtgatgagtgcctaaaagccactcatccgaacaagaagccctttacaggccatcgt
ctgattgagccaatcccggactcgcacatccgggggctgatgtgcctggagcacgaggat
gagaaggtgaatatgtactgtgtgaccgatgaccagttaatctgtgccttgtgtaaactg
gttgggcggcaccgcgatcatcaggtggcagctttgagtgagcgctatgacaaattgaag
caaaacttggagagtaatctcaccaatcttattaagagaaacacagaactggagaccctt
ttggctaagctcatccaaacttgtcaacatgttgaagtcaatgcatcccgtcaagaagcc
aaattgacagaagaatgtgatcttctcattgaaattattcagcaaagaagacaaattatt
ggaacaaagattaaagaaggcaaggtgatgaggctccgcaaactagctcagcagattgca
aactgtaaacagtgcattgaaaggtccgcatcactcatctcccaagcagaacactcactg
aaggagaatgaccatgcccgttttctacagacagcaaagaatatcactgagagagtctcc
atggcaactgcatcctcccaggttctaattcctgaaatcaacctcaatgacacatttgac
acttttgccttagatttttcccgggagaagaaactgctagaatgtctggattacctaaca
gctcccaaccctcccacaattagagaagagctctgcacggcttcctacgataccatcacc
gtccactggacttcggatgatgagttcagtgtggtctcttatgaactccagtacaccata
ttcactggacaagccaatgtcattagtctgtgtaactcggcggatagctggatgattgtg
cccaacatcaagcagaaccactacactgtacatggcctacaaagtggcaccaagtatatc
ttcatggtcaaggccatcaaccaagccggcagccgcagcagtgagcctggaaagttgaag
acaaacagtcagccatttaagctggatcccaaatctgctcatcgaaaactgaaggtgtcc
cacgacaacctgactgtggaacgtgatgagtcatcatccaaaaagagtcatacacctgaa
cgcttcactagccaagggagctatggagtggccggaaatgtgttcattgatagtggccgt
cattactgggaagtggtcataagtggaagcacatggtatgccattggccttgcttacaaa
tcagctcccaaacatgaatggattgggaagaattctgcttcctgggcactctgccgctgc
aacaataactgggtggtgagacataacagcaaggaaatccccattgagccagctccccat
cttcggcgtgtaggcatcctactggactatgataatggctcaattgctttttatgatgct
ttgaactccatccacctctacacctttgatgtggcgcttgcgcagcctgtgtgccccacc
tttactgtgtggaacaagtgtttgacgattataactggtcttcccatcccagaccatttg
gactgtacagaacagctaccttga
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