Arvicanthis niloticus (African grass rat): 117693989
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Entry
117693989 CDS
T08817
Symbol
Pabpc1l2b
Name
(RefSeq) polyadenylate-binding protein 1-like 2
KO
K13126
polyadenylate-binding protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03015
mRNA surveillance pathway
anu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117693989 (Pabpc1l2b)
09123 Folding, sorting and degradation
03018 RNA degradation
117693989 (Pabpc1l2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117693989 (Pabpc1l2b)
03041 Spliceosome [BR:
anu03041
]
117693989 (Pabpc1l2b)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117693989 (Pabpc1l2b)
mRNA cycle factors
Stress granule specific factors
117693989 (Pabpc1l2b)
Spliceosome [BR:
anu03041
]
Complex C
Other components
Complex C specific factors
117693989 (Pabpc1l2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
RRM_MUD2_C
RRM_7
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
117693989
NCBI-ProteinID:
XP_034340595
LinkDB
All DBs
Position
X:56482614..56485599
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AA seq
229 aa
AA seq
DB search
MDEELAAALAAEEEEAAAGGSDDGNPDFPTASLYVGDLHPEVTESMLYEKFSPAGPILSI
RICRDKVTRRSLGYAYVNYQQPVDAKRALETMNFDVINGRPVRIMWSQRDPSLRKSGVGN
VFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAERAIDALNG
MFLNYRKIFVGRFKSHKEREAERGAWARQSTSADFKDFDDDSDDEATFR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagagctggcggcggccttggctgcagaagaggaagaggcggcggccgggggc
tcggacgatgggaacccagactttcccacggcctccctgtacgtgggcgacctgcacccc
gaggtaaccgagtccatgctgtatgagaagttcagccctgccgggcccatcctgtccatc
cgcatctgcagggacaaggtcacccggcgctctctgggctacgcatatgtcaactaccag
caaccggtggatgccaagcgggccctggagaccatgaactttgacgttataaatggcagg
ccagtgcgcatcatgtggtcccagagggacccgtcgctccgcaagagcggggtgggcaac
gtcttcatcaagaacctgggcaagaccatcgacaacaaggcgctgtacaacatcttctcg
gccttcggcaacatcctgtcctgcaaggtggcctgtgacgaaaaggggcccaagggctac
gggttcgtgcacttccagaagcaggagtcggccgagcgggccatagatgcgctgaatggc
atgttcctcaactaccgcaagattttcgtcgggagattcaagtctcacaaggagagagag
gctgaaaggggagcctgggcccgccagtccaccagcgctgacttcaaggatttcgacgac
gactccgatgacgaggccacctttcgatga
DBGET
integrated database retrieval system
