Arvicanthis niloticus (African grass rat): 117693992
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Entry
117693992 CDS
T08817
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3B
KO
K03267
peptide chain release factor subunit 3
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117693992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117693992
03012 Translation factors [BR:
anu03012
]
117693992
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117693992
Translation factors [BR:
anu03012
]
Eukaryotic type
Release factors
117693992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117693992
NCBI-ProteinID:
XP_034340601
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Position
X:49129323..49131854
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AA seq
632 aa
AA seq
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MDLGSSSDSAPDCWDQVDMDAPGSAPGGDGIAPAAMAAAEAAEAEAQRKHLSLAFSSQLN
INAKPFVPSKRAAEFVPSFLSRSAQLPAPTASSCDETCIGGAGEPQGKRMEWGAPVEPSK
DGPLVSWEGSSSVVTMELSEPVVENGEVEMALEESWELKEVSEAKPGGSLRDAGPAEESG
KEMMEEKEEIRKSKSVVVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDRRTLE
KYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVP
NMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTV
DWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPY
LDSLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHSVEVLGIV
SDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSNLCHSGRTFDVQIVIIEHKSIIC
PGYNAVLHIHTCIEEVEVTALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLET
FKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggatctcggcagcagcagcgactcggctcccgactgctgggatcaggtggacatggac
gccccgggttcggctccgggcggggatggaatcgcccccgcagccatggcagcggccgag
gccgcagaagccgaggcccagcgcaagcatctcagcttggccttcagcagtcagctcaac
atcaacgccaaacctttcgtgcctagcaagagagcagcggagttcgtgccgtccttcctg
tccagatcggcccagctgcccgcccccacagcctccagctgcgacgaaacctgcatcggt
ggcgccggggagcctcaaggtaaaaggatggagtggggagcacctgtggaaccttccaaa
gatggccctttagtgtcgtgggagggttccagttcagttgttaccatggaactttcagaa
cctgttgtagaaaatggagaggtggagatggccctggaagaatcgtgggagcttaaagaa
gtgagtgaagcaaagcctgggggttctttgagagatgcagggcccgcagaagaaagtggc
aaggaaatgatggaggagaaagaggaaataaggaaatcaaaatctgtggtcgtaccatca
ggtgctcctaagaaggaacacgtaaatgtggtgttcattgggcatgtagacgccgggaag
tcaaccattggaggacaaataatgtttttgacaggaatggttgacagaaggacacttgag
aaatatgaacgagaagctaaggagaagaatagagagacctggtacttatcctgggcctta
gatacaaaccaggaagaacgagacaagggtaaaacagtggaagtgggccgtgcatatttt
gaaacagaaaagaagcatttcacaatcttagatgcccctggccacaagagttttgttcca
aatatgatcggtggtgcttctcaagctgatttagctgtgctggtcatctctgccaggaaa
ggagaatttgaaactgggtttgaaaaaggtggacagacaagagaacatgcaatgttggcc
aaaacagcaggggtgaaatacttaatagtgcttattaataagatggatgatcccacagtg
gattggagcagtgagcgatatgaagaatgtaaagagaaactggtgccctttctgaaaaaa
gttggtttcagtccaaaaaaggacatccactttatgccctgctcaggactgactggagca
aatattaaagagcaatctgatttctgtccttggtacactggattaccatttattccgtat
ttggatagtttgccaaacttcaacagatcaattgatgggccaattaggttgccaattgtg
gataagtacaaggatatgggcactgtggtcctgggaaagctggaatcaggatcaattttt
aaaggccagcagcttgtgatgatgccaaacaaacacagtgtggaagttctaggaatagtt
tctgatgatgctgagactgattttgtagctccaggtgaaaacctcaaaatcagactgaaa
ggaattgaagaagaagagattcttccgggcttcatactttgtgaacccagtaatctttgc
cattctggacgcacatttgatgttcagatagtgatcattgagcacaagtctatcatctgc
ccaggttataatgcagtgcttcacattcacacttgcatagaggaggtggaggtaacagcc
ttgatctctttggtagacaaaaagtcaggagaaaaaagcaagacacggccccgctttgtg
aagcaagatcaagtatgcattgcccggctaaggacagcaggaactatctgcctggagaca
tttaaagattttcctcagatgggtcgttttactttaagagatgagggtaagaccatcgcc
attggaaaagttctgaagctggtcccagagaaggactaa
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