Arvicanthis niloticus (African grass rat): 117694055
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Entry
117694055 CDS
T08817
Name
(RefSeq) LOW QUALITY PROTEIN: AP-2 complex subunit beta-like
KO
K11825
AP-2 complex subunit beta-1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04144
Endocytosis
anu04721
Synaptic vesicle cycle
anu04961
Endocrine and other factor-regulated calcium reabsorption
anu05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117694055
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
117694055
09156 Nervous system
04721 Synaptic vesicle cycle
117694055
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
117694055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117694055
Membrane trafficking [BR:
anu04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
117694055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
Arm
Cnd3
NELF-A_N
Arm_2
INTS1_R4
Transposase_22
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
117694055
NCBI-ProteinID:
XP_034340677
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Position
X:complement(61196204..61199123)
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AA seq
939 aa
AA seq
DB search
MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNYMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKNCEDPNPLIRASVVRTMGCIRMGKITE
YLCEPLRKCLKDEDPYVQKTAAVXVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA
VAALSEISESHPNSNSLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQY
VALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKLEQSSERCINTLLDLIQTKVNYVVQEAIVVIRDIFRK
YPNKYKSIIATLCENLDSLDEPDAQAAMIWIVGEYAERINNADELLESFLEGFHDESTQV
QLTLLTAIVKLFLKKPSETQELVQHVLSLATQDSDNPDLRDRGYIYWCLLSTDPMTAKEV
VLSEKPLISEETXLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIHHGST
DAGDSPVGTTTATNLEQPQVIPSQGDLLGDLLNLDLGPLVNVPQVSSIQMGAVDLLGGGL
DSLVGQPFIPSSVSATFAPSPTLAVVSSGLNDLFELSTGIGMAPGGYVAPKAVWLPAVKA
KGLEISGTFTHRQGHIYMEMNFTDKALQHMTDFAFQFNKNSFGVIPSTPLAIHTPLMPNQ
SIIDVSLPLNTLGQVMKMEPLNNLQVVVKNNIIDVFYFSCLIPLNVLFVEDGKMERQVFL
ATWKDIPNENELQFQIKECHLNAHTVFSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIW
ILAELRIQPGNSNYTLSLKCRAPEVSQYIYQVYNSILKN
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgactgactccaagtacttcacaaccaataagaagggggaaatctttgaattaaaggct
gaactcaacaatgaaaagaaagaaaagaggaaggaggctgtgaagaaagtgattgctgct
atgaccgtggggaaggacgtgagctctctcttcccagatgtggtgaactatatgcagact
gataatctggaactaaagaagctcgtgtacctctatctgatgaactatgccaagagtcag
ccagacatggccatcatggctgtcaacagctttgtgaagaattgtgaagatcccaatcct
ttgattcgagcctcggtggttagaaccatgggatgtatccggatgggcaagatcacagag
tatctctgtgaaccccttcgcaagtgcttgaaggacgaagacccttatgttcagaaaaca
gcagcagtgtgagtggcaaaactccatgatatcaatgctcagatggtggaagatcaggga
tttctggattctctgcgggatctcatagcagactcaaacccaatggtggtggctaatgct
gtagcagcattgtctgagatcagtgagtctcacccaaacagcaactcacttgatctgaac
cctcagaatatcaataagctgctcacagccctgaatgagtgcactgaatggggccagatt
ttcatcctggactgcctgtctaattacaaccctaaagatgaccgggaagctcagagcatc
tgtgagcgagtaactcctcggctatcccatgccaactctgcagtggtgctttcagcagta
aaagtcctaatgaagtttctagaattgttacccaaggactctgactactacaatatgctg
ctaaagaagttagcgcctccacttgtcactttgctgtctggggagcctgaagtacagtat
gtcgccctgaggaacatcaacctaattgtccagaaaaggcctgaaatcttgaagcaggaa
atcaaggtcttctttgtgaagtacaatgatcctatctatgttaaactagagaagttagac
atcatgattcgtcttgcatcccaagccaacattgctcaggttctggcggagctgaaggaa
tatgccactgaagttgatgtggactttgttcgcaaagctgtgagggccattggacggtgt
gccatcaaactggagcaatcatcagaacgctgtataaatacactgcttgatctaatccag
accaaagtaaattatgtggtccaagaggcaattgttgtcatcagggacatcttccgaaaa
taccccaacaagtataaaagtattattgccacgctgtgtgagaacttggactccctggat
gaacccgatgcccaagcagctatgatttggattgtaggcgaatatgctgaaagaatcaat
aatgcagatgaattactagagagcttcctggagggttttcatgatgaaagcacccaggtg
cagctcacactgcttactgccatagtgaagctgtttctcaagaagccgtcagaaacacag
gagctggtccaacacgtcttgagcttggccacacaggattctgataatcctgaccttcga
gatcggggctatatttattggtgccttctttcaactgaccctatgacagccaaagaagta
gtgttgtctgagaagccattgatctctgaagagacanncctcattgagcctaccctcctg
gatgagctcatctgccacattggttctttggcctctgtgtaccataaacctccaaatgct
tttgtcgaagggagtcatgggattcatcgcaaacacttgccaattcatcatgggagcact
gatgcaggtgatagccctgttggcaccaccactgcaaccaacttggaacagcctcaggtc
atcccctctcaaggtgaccttctgggggatcttttaaatcttgacctgggtcccctggtg
aatgtcccgcaagtgtcctccatacagatgggagcagtggatctgttaggaggaggactg
gatagcctggtaggacaacccttcatcccgtcatcagtgtctgcaactttcgctccttca
cctactcttgctgtggtcagcagtggtttgaatgacctgtttgagctttccactgggatc
ggcatggcacctggcggatatgtggctcctaaggcggtctggctgcctgcagtaaaggct
aaaggcttggagatttcggggacatttactcaccgccaagggcacatctatatggaaatg
aacttcaccgacaaagctctgcagcatatgacagactttgcattccagtttaataaaaat
agcttcggtgtcatcccaagcactcccttggccatacatactccactgatgccaaaccag
agcattatagatgtctctctgcctctcaacaccttgggccaggtcatgaagatggaaccg
ctgaataacttgcaggtggttgttaaaaacaatattattgatgtcttctacttcagctgc
ctcatcccactcaatgtgctttttgtagaagatggcaaaatggaacgccaggtcttcctt
gcaacgtggaaggatattcccaatgaaaatgaactccagtttcagattaaggaatgtcat
ttaaatgctcacacagttttcagcaagttacaaaacaacaatgtttacactatcgccaag
aggaatgtggaagggcaggacatgctgtaccagtccctgaagctcactaatggcatttgg
attttggcagagctgcggatccagccaggaaactccaattatacactgtcactgaagtgt
agagcccctgaagtctctcagtacatctatcaggtctacaacagcattttgaaaaactaa
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