Arvicanthis niloticus (African grass rat): 117694168
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Entry
117694168 CDS
T08817
Symbol
Hcfc1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03083
Polycomb repressive complex
anu04980
Cobalamin transport and metabolism
anu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117694168 (Hcfc1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
117694168 (Hcfc1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117694168 (Hcfc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
anu01009
]
117694168 (Hcfc1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117694168 (Hcfc1)
03029 Mitochondrial biogenesis [BR:
anu03029
]
117694168 (Hcfc1)
Protein phosphatases and associated proteins [BR:
anu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117694168 (Hcfc1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
117694168 (Hcfc1)
HMT complexes
COMPASS/SET1 complex
117694168 (Hcfc1)
MLL-HCF complex
117694168 (Hcfc1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
117694168 (Hcfc1)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
117694168 (Hcfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
117694168
NCBI-ProteinID:
XP_034340884
EnsemblRapid:
ENSANLG00005022490
LinkDB
All DBs
Position
X:complement(128570417..128595028)
Genome browser
AA seq
2091 aa
AA seq
DB search
MASAVSPANLPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLVPQAATAPPSTTTIQVLPTMPGSSISVPTAART
QGVPAVLKVTGPQATTGTPLVTMRPASQAGKAPVTVTSLPASVRMVVPTQSAQGTVIGSN
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG
QPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGAH
STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQV
TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCET
HETGTTNTATTTVVANLGGHPQPTQVQFVCDRQEAAASLVTSAVGQQNGNVVRVCSNPPC
ETHETGTTNTATTATSNMAGQHGCSNPPCETHETGTTSTATTAMSSMGTGQQRDTRRATN
TPTVVRITVAPGALERALGTVKPQCQTQQTNMTSTTMTVQATGAPCSAGPLLRPSVALEA
GRHSPAFVQLALPSVRVGLSGANSKDTPTGRQPETYHTYTTNTPTTARSIMVAGELGAAR
VVPTSTYESLQASSPSSTMTMTALEALLCPSASVTQVCSNPPCETHETGTTNTATTSNAG
SAQRVCSNPPCETHETGTTHTATTATSNGGAGQPEGGQQPASGHPCETHQTTSTGTTMSV
SVGALIPDATPSHGTLESGLEVVAVSTVTSQAGATLLASFPTQRVCSNPPCETHETGTTH
TATTVTSNMSSNQDPPPAASDQGEVASTQGDSANITSASAITTTVSSTLPRAVTTVTQST
PVPGPSVPNISSLTETTPGALTSEVPIPATITVTIANTETSDMPFSAVDILQPPEELQVS
PGPRQQLPPRQLLQSASTPLMGESAEVLSASQTPELQAAVDLSSTGDPSSGQEPTTSAVV
ATVVVQPPPPTQSEVDQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAAT
EEAQALAIQAVLQAAQQAVMAGTGEPMDTSEAAAAVTQAELGHLSAEGQEGQATTIPIVL
TQQELAALVQQQQQLQEAQAQAQQQHHLPTEALAPADSLNDPSIESNCLNELASAVPSTV
ALLPSTATESLAPSNTFVAPQPVVVASPAKMQAAATLTEVANGIESLGVKPDLPPPPSKA
PVKKENQWFDVGVIKGTSVMVTHYFLPPDDAVQSDDDSGTVPDYNQLKKQELQPGTAYKF
RVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYS
VYLAIQSSQASGEPKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIA
ARNEKGYGPATQVRWLQETSKDSSGTKPASKRPMSSPEMKSAPKKSKADGQ
NT seq
6276 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggctgtatcccccgctaacttgccagcggtgcttctgcagccccgctggaaa
cgggtggtgggctggtcgggtcctgtgccccgaccccgccacggccaccgtgcagtggct
atcaaggagcttatagtggtgttcggtggtggcaacgaggggatagtggacgaactacac
gtgtacaacactgcaaccaaccagtggttcatcccagctgtgagaggggatatccctcca
gggtgtgcagcctatggctttgtgtgtgatggaactcgcctactggtgtttggtgggatg
gtagagtatggaaaatacagcaacgacctctatgaactccaggcaagtcgctgggaatgg
aagagactgaaagcaaagacacccaaaaatggacctcctccgtgtcctaggcttggacat
agcttctcccttgtgggcaacaaatgttacctgtttgggggtctagccaatgatagtgag
gaccccaagaacaacattccgaggtacctgaatgacttatatattctcgaactacggcca
ggctctggagtggtagcgtgggacatccccatcacttacggtgtcctgcctccaccccgg
gagtcacatactgctgtggtctatactgaaaaagataacaagaaatccaagctggtgatc
tatggaggaatgagtggctgcaggctaggagacctttggaccctggatattgagacactg
acatggaataagcccagccttagtggggtggcaccccttcctcgaagtctccactctgca
accaccataggaaacaaaatgtatgtatttggtggctgggtgccccttgtcatggacgat
gtcaaagtggccacacacgagaaggagtggaagtgtaccaacacactggcttgtctcaac
ctggataccatggcctgggaaactatcctcatggatacattggaggacaacattcctcga
gctcgagcaggccactgtgctgttgccatcaatactcgtctgtacatttggagtggccgt
gatggctaccgcaaggcctggaacaaccaggtctgctgcaaggacttgtggtacctggag
acagaaaagccaccacccccagcccgagtacaactagtacgagccaacaccaactcactg
gaggttagctggggtgcagtagcaacagccgacagttaccttctacaactccagaaatat
gacattcctgccacagctgctacggctacctcccccactcccaatccagtcccgtctgtg
cctgccaaccctcccaagagccctgcgccagcagcagctgcacctgctgtacagccactg
acccaagtaggcatcacacttgtgccccaggctgccactgcacccccaagcacaaccacc
atccaggtcttgccgacaatgccaggcagctccatttctgtgcccactgcagccaggact
caaggtgtccctgctgttctcaaagtgactggtcctcaagctacaacaggaacaccactg
gttaccatgagacctgcaagccaggctgggaaagctcctgtcactgtaacttctctgcct
gccagtgtgcgaatggttgtacccacacagagtgcccaggggacggtgattggtagcaac
ccacagatgagtgggatggctgcattggcggcagctgctgctgccacacagaaaatccct
ccttcctcagcacccacagtgctaagtgtcccagcaggcaccaccattgtcaagacagtg
gctgtgacacctggcacaaccactcttccagccactgtgaaggtagcctcctcccctgtc
atggtgagcaacccagccactcgaatgctaaagactgcagctgcccaagtagggacatct
gtgtcctctgctgccaacacatcaacccgccctatcatcacagtacacaaatcggggact
gtaacagtagcccagcaagcccaggtggtgaccacagtggtaggcggagtcaccaagacc
atcaccctagtgaagagtcccatctctgtcccaggaggcagtgctctgatttccaatctg
ggaaaagtgatgtcagtggtccagaccaaaccagttcagacttcagcagtgacaggccag
gcatctacaggccctgtgactcagatcatccagaccaaaggacctctgccagcaggaact
atcctgaagctggtgacatcagcagatggcaagcccacaaccatcatcaccaccacacag
gctagtggggcagggaccaagcccactatcctgggcatcagtagtgtctctcccagcacc
acgaaacctggcacaactactatcattaagaccattcccatgtcggccattatcacccag
gcaggcgccacgggtgttaccagcagtcctggcattaagtcccccatcacaattatcacc
accaaagtgatgacttcaggaacaggagcacctgccaaaatcatcactgctgtccccaag
attgctactggccatgggcaacaaggagtgacccaggtggtgctaaagggggcccctgga
cagccaggcaccatcctccgcactgtgcccatgggcggcgttcgcctggtcacccctgtc
accgtctccgctgtcaagccagctgtcaccacattggttgtgaagggcaccacaggtgtt
acaacactaggcacagtgacaggcactgtctccaccagccttgctggagctggggcacat
agcaccagtgcttccctggctacacctatcactaccttgggcaccattgctacgctctca
agccaggtgatcaaccctactgctatcacagtgtcagctgcacagactacactaacagct
gctggtggactcaccacacccacaatcacaatgcagcctgtctcccagcctacccaggta
actctgatcacagcacccagtggggttgaggctcagcctgtacatgaccttccagtgtcc
attttggcctcacctaccacagagcagcccacagcaacagttaccatcgctgactcaggc
cagggtgatgtacagcctggcactgtgacattggtgtgttccaacccaccctgtgaaacc
catgaaacaggcaccaccaacacagctaccaccactgttgtggctaaccttgggggacat
cctcaacctacccaggtgcagtttgtttgtgacagacaggaggcagctgcttcacttgtg
acctcagctgtaggacaacagaatggtaatgtggtccgtgtctgttcaaatcccccctgt
gagacccatgagacaggcaccaccaacactgccacaacagcaacctccaacatggctggg
cagcatggctgctcgaatcccccctgcgagactcatgagacgggcaccaccagcactgcc
actacagcaatgtccagcatgggcactgggcagcagcgagacacccgtcgtgccactaac
acccctactgtagtgcggatcactgtggctcctggggcattggagagagccctgggtact
gtgaagcctcagtgccaaactcagcagaccaacatgaccagcaccaccatgactgtgcag
gccactggagctccatgctcagctggcccactgctcaggccaagtgtggcactggaggct
gggcgccacagccctgcctttgtgcagctagcccttccaagtgtcagagttgggctaagt
ggcgccaacagcaaggacacgcccacagggcgccaaccagagacatatcatacttacaca
accaataccccaaccacagcccgttctatcatggttgctggggagcttggtgcagctcgg
gtggtccccacatctacatatgagagcctccaggcaagctctcctagcagtaccatgact
atgacagccctagaggcactgctgtgcccttcggcttctgtgacccaagtctgctccaac
ccgccatgtgagacccatgagacgggtaccaccaacaccgccactacctccaatgcgggc
agtgctcagcgagtatgctccaatccgccttgtgagactcatgagacaggcaccacacac
acagctaccactgccacatcaaatggaggtgcaggccagcctgagggtggacaacagcct
gccagtggccatccctgcgagacacaccagacaacttctactggcactactatgtcagtc
agtgttggtgccctgattcctgatgctactccctctcatggaaccctggagtctggctta
gaggtggtagcagtgtccactgtcacctcccaggctggtgccacattgctggcttctttc
ccaacacagagggtatgctccaaccctccttgtgagacccatgagacaggtaccacgcac
acagccaccactgtcacctctaacatgagctcaaaccaagaccctccaccagctgccagt
gaccaaggagaggtggcaagcactcaaggtgacagtgcaaatattaccagtgccagtgct
atcactacaactgtgtcttctacactgccaagagcagtgactactgtgacacagtctaca
ccagttccaggtccctctgtgccgaacatctcatcattgactgagactaccccaggggct
ctgacttccgaagtccccatcccagccacgataacagtgaccatagccaacacagaaact
tctgacatgcccttctctgctgttgacatcctgcagcccccagaggaactccaggtctca
ccagggcctcgccaacagctgcctccacggcaactcctgcagtctgcctccacgcccctg
atgggggagtccgctgaggtcctgtcagcctcccagacccctgagctccaggccgccgtg
gatctgagcagcactggagacccatcttcaggccaggagcctaccacctctgcagtcgtg
gccactgtggtggtccaaccacccccacccacacagtctgaagtagaccagttatcactt
ccccaagagctgatggctgaagcccaggcgggcaccacaacccttatggtaacagggctc
actccagaggagctggcagtgactgctgctgctgaagcagctgctcaagctgcagccact
gaagaagcccaagccttggccatccaggctgtgctccaggccgcacagcaggctgttatg
gcaggcactggggagcccatggatacatctgaagcagccgcagcagtgacacaagcagaa
ctgggtcacctttcagctgaaggccaagagggtcaggctaccaccatacccattgtgctg
acacagcaggagcttgcagccctggtgcagcagcagcagcagctccaggaggctcaagct
caagcacaacaacagcaccaccttcccactgaggctctggccccagctgacagtctcaat
gacccatccatcgagagcaactgcctcaacgagttagctagtgctgtccccagcactgtg
gccttgctaccctcaacagctacagagagcctggctccatctaacacatttgtggctccc
cagcctgttgttgtagccagtccagcaaagatgcaggctgcggctacccttactgaagtg
gccaatggcattgagtccctgggtgtgaaaccggacttgccacccccacccagcaaagcc
cctgtgaaaaaggagaaccagtggtttgatgtgggggtcattaagggtaccagtgtaatg
gtgacacactattttctgccaccagatgatgctgttcagtcagatgatgactcaggcacg
gtcccagactataaccagctaaagaagcaggaactgcagccaggcacggcttataaattt
cgagttgctggaatcaatgcttgtggccgggggcccttcagtgagatttcagcctttaag
acttgtcttcctggtttcccaggggctccttgtgctattaaaatcagcaagagcccagat
ggtgctcacctcacctgggagccgccatctgtgacctcgggcaagatcatcgagtactct
gtgtacctggccatccagagctcacaggccagtggtgagcccaagagctctaccccagcc
cagctggccttcatgcgagtgtactgtgggcctagtccttcctgcctagtgcagtcttcc
agtctctccaacgcccacattgactatactacaaagcctgccatcatcttccgcattgct
gcccgcaatgaaaaggggtacggccctgccacacaagtgaggtggttgcaagaaaccagt
aaagacagctctggcaccaagccagccagcaagcggcctatgtcgtctccagaaatgaaa
tctgctccaaagaagtctaaggctgatggtcagtga
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integrated database retrieval system
