Arvicanthis niloticus (African grass rat): 117694178
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Entry
117694178 CDS
T08817
Symbol
Fmr1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117694178 (Fmr1)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117694178 (Fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
117694178 (Fmr1)
mRNA cycle factors
Stress granule specific factors
117694178 (Fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXMR_C2
KH_1
Agenet
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
117694178
NCBI-ProteinID:
XP_034340913
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Position
X:124012372..124046374
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AA seq
614 aa
AA seq
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MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPERQIPFHDVRFPPPVGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKMKLEVPEDLRQMCAKESAHKDFKKAVGAFSVTYDPENYQLVILSINEVTSKR
AHMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENEKSVPQEEEILPPSSLPSNNSRVGPNSSEEKKHLDTKE
NTHFSQPNSTKVQRVLVVSSIVAGGPQKPEPKAWQGMVPFVFVGTKDSIANATVLLDYHL
NYLKEVDQLRLERLQIDEQLRQIGASSRPPPNRTDKEKGYVTDDGQGMGRGSRPYRNRGH
GRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRGQ
GGRGRGGGFKGNDDHSRTDNRSRNPREAKGRTADGSLQSASSEGSRLRTGKDRNQKKEKT
DSVDGLQPLVNGVP
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaagtgcggggctccaatggcgctttctacaaggcatttgta
aaagatgtccatgaagattctataacagttgcttttgaaaacaactggcagccagagaga
cagattccattccatgatgtgagattcccaccacctgtaggttataataaagatataaac
gaaagtgatgaagttgaggtttattccagagcaaatgaaaaagagccttgctgttggtgg
ttagctaaagtgaggatgataaagggtgagttttatgtgatagaatatgcagcatgtgat
gctacatataatgaaattgtcacaattgagcgtctaagatccgttaatcccaacaaacct
gctacaaaagatactttccataagatgaagctggaggtgccagaagatttacgacaaatg
tgtgccaaagaatcggcacataaggattttaaaaaggcagttggtgccttctctgtaact
tatgatccagaaaattatcagctggtaattttgtccatcaatgaagtcacctcaaagcga
gcccacatgttaattgacatgcactttcggagtctgcgcaccaagttgtcacttatactg
agaaatgaagaagccagtaaacaactggagagttcaaggcagcttgcctcaagatttcat
gaacaatttatcgttcgagaagatctgatgggtctagctattggtactcatggtgctaat
attcagcaagctagaaaagtacctggggtcactgctattgatttagatgaggatacctgc
acatttcatatttatggagaggatcaagatgcagtgaaaaaggctagaagctttctggaa
tttgctgaagatgtcatacaagttccacgaaacttagtaggcaaagtaataggaaaaaat
ggaaagctgattcaagagatcgtggacaagtcaggagttgtgagggtgaggattgaggct
gaaaatgagaaaagtgtcccacaagaagaggaaattctgccaccaagttccctaccttcc
aataattcaagggttggacctaattcctctgaagaaaagaaacatttagatacaaaggaa
aacacccatttttctcaacctaacagtacaaaagtccagagggtgttagtggtttcatca
attgtagcagggggaccccagaaacctgaacccaaggcttggcagggtatggtaccattt
gtttttgtgggaacaaaagacagcatcgctaatgccactgttcttttggattatcacctg
aactatttaaaggaagtagaccagttgcgtttggagagattacaaattgatgagcagttg
cgacaaattggagctagttctagaccaccaccaaatcgtacagataaggaaaaaggctat
gtgactgatgatggtcaaggaatgggtcgaggtagtagaccttacagaaatagggggcac
ggcagacgcggtcctggatatacttcaggaactaattctgaagcatcaaatgcttctgaa
acagaatctgaccacagagacgaactcagtgattggtcattagctccaacagaggaagag
agggagagcttcctgcgcagaggagacggacggaggcgtggaggaggaggaagaggacaa
ggaggaagaggaagaggaggaggcttcaaaggaaacgacgatcattcccgaacagataat
cgttcgcgtaatccaagagaggctaaaggaagaacagctgatggatccctgcagagtgcc
tccagtgaagggagccggttgcgtacgggtaaagatcgtaaccagaagaaggagaagaca
gacagtgtggatgggctgcaacctctcgtgaatggagtaccctaa
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