Arvicanthis niloticus (African grass rat): 117694268
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Entry
117694268 CDS
T08817
Symbol
Psma1
Name
(RefSeq) proteasome subunit alpha type-1
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03050
Proteasome
anu05010
Alzheimer disease
anu05012
Parkinson disease
anu05014
Amyotrophic lateral sclerosis
anu05016
Huntington disease
anu05017
Spinocerebellar ataxia
anu05020
Prion disease
anu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
117694268 (Psma1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
117694268 (Psma1)
05012 Parkinson disease
117694268 (Psma1)
05014 Amyotrophic lateral sclerosis
117694268 (Psma1)
05016 Huntington disease
117694268 (Psma1)
05017 Spinocerebellar ataxia
117694268 (Psma1)
05020 Prion disease
117694268 (Psma1)
05022 Pathways of neurodegeneration - multiple diseases
117694268 (Psma1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
anu01002
]
117694268 (Psma1)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
anu03051
]
117694268 (Psma1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117694268 (Psma1)
Enzymes [BR:
anu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
117694268 (Psma1)
Peptidases and inhibitors [BR:
anu01002
]
Threonine peptidases
Family T1: proteasome family
117694268 (Psma1)
Proteasome [BR:
anu03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
117694268 (Psma1)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117694268 (Psma1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
117694268
NCBI-ProteinID:
XP_034340998
LinkDB
All DBs
Position
1:complement(81908087..81919132)
Genome browser
AA seq
263 aa
AA seq
DB search
MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ
KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPT
QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFM
ECNLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLDGLEERP
QRKAQPSQAADEPAEKADEPMEH
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtaaccagtatgacaatgatgtcactgtttggagccctcagggcaggattcat
caaattgaatacgcaatggaagctgttaagcaaggttcagcaacagttggtctaaagtca
aaaacacatgcagtgttggttgcactgaagagggcacagtcagagcttgccgctcaccag
aagaaaattctccacgttgacaaccatattggtatctcaattgcgggtctaactgctgat
gccagactgttgtgtaactttatgcgacaggagtgtttggattccagatttgtatttgac
agaccacttcctgtgtctcgccttgtgtctctaattggaagcaagacccagatcccaaca
caacgatatggccggagaccgtatggtgttgggctgctcattgctggttatgatgatatg
ggccctcacattttccaaacctgtccctctgctaactattttgactgcagagctatgtct
atcggagcccgttctcaatcagctcgtacttacctggagagacatatgtctgaatttatg
gagtgcaatttggatgaactggttaaacatggtctgcgtgccttaagagagacgctccct
gcagaacaggacctgaccacaaagaatgtttccattggaattgttggtaaagacttggaa
tttacaatttatgatgatgatgatgtgtctccattcctggatggtcttgaagaaagacca
cagagaaaagcacagccttcacaggctgctgatgaacctgcagaaaaagctgatgaacca
atggaacattaa
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integrated database retrieval system
