Arvicanthis niloticus (African grass rat): 117694279
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Entry
117694279 CDS
T08817
Symbol
Atg4a
Name
(RefSeq) cysteine protease ATG4A isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04136
Autophagy - other
anu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117694279 (Atg4a)
04136 Autophagy - other
117694279 (Atg4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
anu01002
]
117694279 (Atg4a)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117694279 (Atg4a)
03029 Mitochondrial biogenesis [BR:
anu03029
]
117694279 (Atg4a)
Peptidases and inhibitors [BR:
anu01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
117694279 (Atg4a)
Membrane trafficking [BR:
anu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
117694279 (Atg4a)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117694279 (Atg4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
117694279
NCBI-ProteinID:
XP_034341002
LinkDB
All DBs
Position
X:87325604..87376558
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AA seq
322 aa
AA seq
DB search
MLRCGQMMLAQALICRHLGRDWNWERQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVG
EGKSIGEWFGPNTVAQVIKKLALFDEWNSLAVYVSMDNTVVIEDIKKMCCVLPAGAADVA
GESPPDSLAACSQSKGTSAPCPAWKPLLLIVPLRLGINQINPVYIEAFKECFKMPQSLGA
LGGKPNNAYYFIGFLGDELIFLDPHTTQTFVDTEESGLVDDQTFHCLQSPQRMSILNLDP
SVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHPSHWPPFVPPAKPEVTTTGAE
FIDSTEQLEDFDLEEDFEILSV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgtgggcagatgatgctggctcaagccctcatctgtagacacctgggaagg
gattggaactgggagagacaaaaagagcaacccaaagagtaccaaaggatactgcagtgt
ttcctagatagaaaagactgttgctactcaatccatcagatggcacaaatgggagtagga
gaagggaaatctattggtgaatggtttggaccaaatacagttgcgcaggtgataaaaaaa
ctcgctttatttgatgaatggaattccttggctgtctatgtttcaatggataacacagtg
gtcattgaagatatcaagaaaatgtgctgtgttctccctgcgggcgctgctgacgtagct
ggtgagagccctcctgattctctggctgcttgcagtcagagtaaaggcacctctgccccg
tgcccagcctggaaacccctgctgctcattgtgccccttcgcctgggtataaaccaaatc
aatcctgtgtatattgaagcattcaaagagtgttttaagatgccacagtctttaggggct
ttaggaggaaagccaaataacgcctattatttcataggattcttaggtgatgagctcatt
ttcttggaccctcacacaacccagacctttgttgacactgaagagagtgggctagtagat
gaccagactttccattgcctgcagtctccacagcggatgagtatcctgaacttggatcct
tctgtggccttgggatttttctgcaaggaagagaaagactttgataattggtgtagcctt
gttcagaaggaaattctaaaggagaatctgaggatgtttgaattagttcagaagcaccca
tcacactggcctccctttgtacctccagccaagccagaagtgacaactacaggggcagaa
ttcatagactctactgaacaactggaggactttgacctggaggaagattttgagattctc
agtgtgtag
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