KEGG   Arvicanthis niloticus (African grass rat): 117694550
Entry
117694550         CDS       T08817                                 
Symbol
Xrcc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:anu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117694550 (Xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:anu03400]
    117694550 (Xrcc1)
DNA repair and recombination proteins [BR:anu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     117694550 (Xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT Abhydrolase_6
Other DBs
NCBI-GeneID: 117694550
NCBI-ProteinID: XP_034341404
LinkDB
Position
1:3923639..3951402
AA seq 631 aa
MPEISLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI
GNDGSAFVEVLVGSSAGGATAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRIFGPDKLVR
AAAEKRWDRVKIVCSQPYSKDSPYGLSFVRFHSPPDKDEAEAPSQKVTVTKLGQFRVKEE
DAGANSLKPGALFFSRINKASSASASDPAGPSYAAATLQASSAASSASPVPKVVGSSSKP
QESPKGKRKLDLNLEDRKPPSKPSAGPPAPKRPKLPVPARTPAAAPASTPAQRAVPGKPR
GEATEPRGARAGPQELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHL
ICAFANTPKYSQVLGLGGRIVRKEWVLDCYRMRRRLPSRRYLMAGLGSSSEDEGDSHSES
GEDDTPKLPRKRPQPKAKTQAAGPNSTPRPPTPEETKAPSPEPQNNNDTEGEQSEGRDNG
AEDSGDTEDELRRVAKQREQRQPPAPGENGEDPYAGSTDENTDNEAPSEADLPIPELPDF
FEGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSERVQFVITAQEWDPNFEEALMENP
SLAFVRPRWIYSCNEKQKLLPHQLYGVVPQA
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgccggagatcagcctccgccacgtcgtgtcctgcagcagccaggactcgacccattgt
gctgaaaaccttctcaaggccgacacttaccggaagtggcgggcagccaaggcaggagag
aagaccatctctgtggtcctacagttggaaaaggaggaacagatacacagtgtggacatt
gggaatgatggctcggcctttgtggaggtgctagtgggcagctcggctggaggggccaca
gctggtgaacaggactatgaggtccttctggtcacctcctctttcatgtccccctctgag
agccgaagtggctcgaatcccaaccgtgttcgcatttttggacctgacaagttagtccgg
gcagcagcagagaagcgctgggaccgtgttaaaattgtgtgcagccagccatacagcaag
gactcaccctatggcctgagttttgtgaggtttcatagccctccagacaaagatgaggcg
gaggctccatctcagaaggtgacagtgaccaagctcggccagttccgtgtaaaggaggag
gatgccggtgccaactccctgaagccaggggccctcttcttcagtcgcatcaacaaggcg
tcttcagcctctgcaagtgaccctgcaggacccagctacgcagcagctacgctgcaggcc
tctagtgcagcctcctcagcctctccagtccccaaggttgtgggcagctcttctaagcct
caggagtctcccaaagggaagaggaaactggacttgaatctagaagacaggaaacctccc
agcaaaccctcagcagggccacccgcccccaagagacccaaattgcctgttcctgctcgt
accccagctgcagctccagcctctaccccagcacagagagctgtcccagggaagccccgg
ggagaagccacagagcccaggggagctcgcgctggaccccaggagctgggcaagatcctg
cagggggtggtggtggtgctcagtggtttccagaaccccttccgctccgagctgcgggac
aaggccctggagctgggggccaagtatcggccagactggaccccggacagcacacatctc
atctgtgcctttgccaacactcccaagtacagccaggtcctgggccttggaggccgtatt
gtgcgtaaagaatgggtgctggactgttaccgcatgcggcgccggctgccctcccggagg
tacctcatggcaggccttggatccagcagtgaagatgaaggggactctcacagtgagagc
ggtgaagatgacactcccaagctcccccgaaagcggccccagcccaaagccaagacccag
gcagcaggacccaactcaaccccgaggccaccaaccccagaagagaccaaagcaccatca
ccagaaccccagaacaataatgacactgagggggaacagtcagaaggacgggacaatggg
gcagaagattccggggacaccgaggatgaactgaggagggtggccaagcagagggaacaa
aggcagcccccagccccgggggagaacggtgaggacccatatgcaggctccacagatgag
aacacggacaatgaggctccgtcagaggctgacctgccaattccagagctcccagacttc
tttgagggcaaacacttcttcctgtatggcgagttccctggggatgagaggaggaagctc
atccgatatgtgacagctttcaacggtgagcttgaggactacatgagtgaacgggtccag
tttgtcatcacggcccaggagtgggatcccaactttgaggaggccctgatggaaaaccct
tccctggccttcgtccggccccggtggatctacagttgtaatgagaagcagaagttactc
ccccaccagctctacggggtggtgccccaggcctga

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