Arvicanthis niloticus (African grass rat): 117694564
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Entry
117694564 CDS
T08817
Symbol
Hdx
Name
(RefSeq) highly divergent homeobox isoform X1
KO
K24884
highly divergent homeobox
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117694564 (Hdx)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117694564 (Hdx)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
NCC-H
Motif
Other DBs
NCBI-GeneID:
117694564
NCBI-ProteinID:
XP_034341419
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All DBs
Position
X:complement(63551364..63662901)
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AA seq
691 aa
AA seq
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MNLRSVFTVEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMS
SKSCESGAAGTVSGTSLAAPDITVRNVVNIPRPSSQQSSWTSANNDVIVTGIYSPASSSS
KQGTTKHTNTQITEAHKIPIQKAVSKNDTEFQLHIPVQRQVAHCKNASVLLGEKTIILSR
QTSVLNGGNSVYNHTKKSYGSSPVQASEMTVPQKPSVCQRPCKIEPVGIQRSYKPEHAGL
ASHNLCGQKPTIRDPCCRTQNLEIREVFSLAVSDYPQRILGGNTTQKPGSAEGTCLSIAM
ETGDAEDEYAREEELASMGAQISYSRFYESGNSLRAENQSTTLPGPGRNLPNSQMVNIRD
LSDNVLYQNRDYHLTPRTSLHTASTTMYSNTNPSRSNFSPHFVSSNQLRLSQNQNNYQIS
GNLSVPWITGCSRKRALQDRTQFSDRDLATLKKYWDNGMTSLGSVCREKIEAVATELNVD
CEIVRTWIGNRRRKYRLMGIEVPPPRGGPADFSEQSESGSLSALTPGEEAGPEVGEDNDR
NDEVSICLSEASSQEESNELIPNETRAHKDEEHQAVSADNVKIEIIDDEESDMISNSEVE
QENTLLDYKNEEVRFIENELEIQKQKYFKLQTFVRNLILAMKADDKEQQQALLSDLPPEL
EEVDFSHASPDPDDTSFSVSSLSEKNASDSL
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaatctacgttctgtatttactgtagagcaacaaaggattttacagcgttattatgaa
aatggaatgacaaatcaaagtaaaaattgctttcagctcatattacagtgtgcacaggag
actaagctggacttcagtgtagtcaggacgtgggttggcaataagcgaagaaaaatgagt
agtaaaagctgtgaatcgggagcagcgggaactgtgtctggtacctcattggcagctcca
gacattactgtcagaaatgtggttaatattccccgcccttcaagccagcaatcttcttgg
acttctgccaataatgatgtcattgtaactggtatatacagtccagcaagctcatcaagt
aagcaaggcactacaaagcatacaaatacacaaattacagaagcacataaaattcctatt
cagaaggcagtcagtaaaaatgacactgaatttcaattgcacattcctgttcaaagacaa
gtagcacactgtaaaaatgcttctgtgctcctaggggaaaagacaattattttgtcaaga
cagacaagtgtactaaatggtggcaactcagtgtacaatcacacaaagaaaagctatgga
agttctccggtgcaagcttctgaaatgacagtacctcaaaagccatctgtgtgccagcga
ccttgcaaaattgaaccagttgggattcaaaggtcatataaacctgaacatgcaggcctg
gcatcacataacttatgtgggcaaaagccaaccattagagacccttgctgtagaacacaa
aacttagaaattcgtgaagtgttttcattggcagtcagtgattaccctcagagaattctg
ggaggaaataccacacagaagccaggctcagcagaaggaacttgtttgtccattgcaatg
gagactggagatgcagaggatgaatatgccagagaagaagagctggcatcaatgggagca
cagataagctactcaaggttttatgaaagtggcaattcccttcgagctgagaaccaaagt
acaactttgcctggaccaggaagaaacctgccaaattcacaaatggtaaatattagagat
ttgtcagacaatgtactgtatcaaaatagagactaccatttgacaccacggacctcatta
catacagcatctactactatgtacagtaatactaatccatcacggagtaatttttctcca
cattttgtatcatcaaaccaactgaggttatcacaaaaccaaaacaattaccagatttca
ggaaacctttctgtgccttggattacagggtgttctaggaaaagagcactacaggaccgc
actcaattcagtgaccgagacttggctactcttaagaagtactgggacaatggtatgacc
agcctgggctctgtatgtagagagaagattgaagctgttgcaactgaattaaatgttgac
tgtgaaatagttcggacttggattgggaatcgaagaagaaaatatcgtttaatgggaatt
gaagtcccacctccaagaggaggccctgctgatttctctgagcagtctgagtctggttct
ttgtctgcactcacaccaggagaggaagctgggcctgaagtaggagaggataatgacaga
aatgatgaagtgtccatctgtttgtccgaagcaagctctcaagaggagtccaatgaactt
atcccaaatgagaccagggcacataaggatgaagagcatcaggcagtatccgcagataat
gtgaaaatagaaattatcgatgatgaagaaagtgacatgataagcaattctgaggttgaa
caagagaatactctcctggattacaagaatgaagaagtcagattcattgaaaatgagcta
gagattcaaaagcaaaaatactttaagctccagacttttgttagaaacctgattctcgct
atgaaagctgatgataaagaacagcagcaggcactgctgtcagatttacctccggaatta
gaagaggtggatttcagtcatgcctcaccggatcctgatgatacctcattcagtgtgtct
tctttatcagagaaaaatgcctcagacagtttgtga
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