Arvicanthis niloticus (African grass rat): 117694610
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Entry
117694610 CDS
T08817
Name
(RefSeq) LOW QUALITY PROTEIN: transcription termination factor 1-like
KO
K15225
transcription termination factor 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
117694610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117694610
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
117694610
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
117694610
NCBI-ProteinID:
XP_034341473
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Position
X:42748582..42751123
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AA seq
833 aa
AA seq
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MERGTRKFKTHTTTLCKKKKWSSVSEKRPQKWPSQHLESKQPQVSVLGKRKRKSQKPAQE
SLESEWPQKAKRKKRRREFQIPAQESLESEQPPVSMLGKRRRESQTSAQENLESQQPRKA
KRKKKKKKESQELTSSLLKNSETFHKAKKTISAHKKKKNSVWEVDVETGVILVDKENMEN
LLQTSRKDVDIVYVDMSKGQRSARVDETEELPTAAPKEHDWRELHSDVRSKKNQKHPQKG
VPWDAVQGSQPESISLSQSESLSSVDLEGRSTKAAVFCKKKSKKTVFRNQELETVPASLD
SSETISESLDSTHHGGVVGPGEEGESIKESHSIEKKSKKKKHTSIALATSSDSVSVLDSK
TENALMDTSEGSGTMREEEVDHSPTEAEAQACSTKKHREEMQRLEPTREEESSLESASNS
ATRYVSEDRRESEESDVDLGSAVRQLQEFIPDIQERAATTIRCMYRDDLGSFKEFKAQGV
AIRFGKFSAKENKQIEKNVQDFLSLTGIESADKLLYTDRYPEEKSLITNLKRKHAFRLHM
KGIARPWKLVYYRVKKILDVNNYKGRYNEEDTKKLKAYHSLHGNDWKKIGAMVARSSLSV
ALKFSQIGGDRNHGAWSKAETQRLIKAVEDVILKKMSPQELRELDSRLQEDPEGRLSIVR
EKLYKGISWVEVEARVETRNWMQCKSKWTEILTKRMTHGGFVYRGVNALHAKITLIERLY
ELNVNDANEIDWEDLAGAIGDVPPPFVQAKFYKLKAACVPFWQKKTFPKIIGYLYEHSLP
LLKEKLNKKMEKKEXQIQTPSAPKQDFLFKDIFHCDDDSDEGGSEEPSSSDVQ
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggggcacaagaaaatttaagacccacaccacaactttgtgcaagaaaaagaaa
tggtcttctgtgtctgaaaaaagacctcagaaatggccctctcaacacttggagagcaag
cagcctcaggtgtctgtgctggggaagaggaagaggaagtcccaaaaaccagcccaagag
agcttggagagtgagtggcctcaaaaagctaagaggaagaagagaaggagggaattccag
ataccagcccaggagagcttggagagcgagcagcctccagtgtccatgctggggaagagg
aggagggagtctcagacatcagcccaggagaacttggagagccagcaacctcggaaagcc
aagaggaagaagaagaaaaagaaggagtcccaggagcttacttcttcccttctgaaaaat
tcagaaaccttccataaagctaagaagaccatttctgcccacaaaaagaaaaagaatagt
gtttgggaggtggatgtggaaactggagtcatccttgtagataaggagaacatggagaac
ctgctacagacttctagaaaggatgtggatattgtttatgttgatatgagcaagggacaa
aggtcagccagagtggatgaaacagaagagctgcccactgctgcacccaaggagcatgac
tggcgagagctgcacagtgatgtcaggagcaaaaagaatcaaaagcacccccagaaaggt
gtgccctgggatgctgtccagggaagccagcctgagagtatttccctgtcccagtcagag
tccttgtcttctgtggatctagaaggcagaagcacaaaagcagcagtgttttgtaaaaag
aagtctaaaaaaacagtgttcaggaaccaggaattggagaccgtccccgcgagtcttgat
agctcggagactatctctgagagtcttgatagtacacaccatggaggagtagttgggcct
ggagaagaaggtgagagcatcaaagaatcccacagtatcgagaaaaagtccaagaaaaag
aagcacacatccattgctcttgccacctctagtgacagtgtctcggtgctagacagcaag
actgagaatgccctcatggacacatcagaaggtagtggtactatgagggaagaggaagtg
gaccacagcccaacagaggcagaagcccaggcttgttccaccaagaagcacagggaagag
atgcagaggttagaacctacccgtgaagaagaaagcagtttggaatcagctagcaattct
gcaacaagatatgtatctgaggacaggagagaatctgaggagtcggatgtggatttgggc
tctgcagtgagacagctccaagagttcattcctgacatacaagaaagggcagccaccacg
atcagatgcatgtatagagatgacctagggagcttcaaagaatttaaggcacaaggtgtg
gctattagatttggcaagttttctgctaaagaaaataaacaaatagagaaaaatgtgcaa
gatttcctgtccctgactggaattgagagtgcggacaagctgctgtacacggacagatac
ccagaggagaagtctctgatcaccaacctaaaacggaagcatgccttcagactgcacatg
aagggcatcgctcggccctggaagcttgtgtactatcgtgtaaagaagatacttgatgtg
aataactacaaaggcaggtacaatgaagaagatactaagaagctgaaggcctaccattcc
ctccatggaaatgactggaaaaagattggggccatggtagcccgaagtagcctctcagtt
gccctcaagttctctcagattggtggtgatagaaaccatggtgcttggagtaaggcagaa
acccagaggctaatcaaggctgtggaggacgtgatcctaaagaagatgtctccccaggag
ttaagagaactagattctcgactccaggaagaccctgaaggtcgcctgtccattgtccgg
gaaaaactctacaagggcatatcgtgggtggaagtggaagccagagtggagacccggaac
tggatgcagtgcaaaagtaagtggacagagattcttaccaaaaggatgacccatggtggg
ttcgtgtaccgtggggtcaatgctctacacgccaaaatcacccttattgaaaggttgtac
gaactaaatgtgaatgatgctaatgaaatagattgggaagatcttgctggtgccataggg
gatgtccctccaccttttgttcaggcaaaattttataagctgaaagctgcctgcgttccc
ttttggcagaaaaagacttttccaaaaatcattggttacttatatgagcacagtctgcct
ttgctgaaagaaaagttaaacaagaagatggagaaaaaagagnntcagatccaaacgccc
tctgctcccaaacaagatttcctgttcaaagacatctttcattgtgatgatgacagcgat
gaagggggctcagaggagcccagctcctctgatgtgcagtga
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