Arvicanthis niloticus (African grass rat): 117694617
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Entry
117694617 CDS
T08817
Name
(RefSeq) high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03410
Base excision repair
anu04140
Autophagy - animal
anu04217
Necroptosis
anu04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117694617
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117694617
09143 Cell growth and death
04217 Necroptosis
117694617
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
117694617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117694617
03400 DNA repair and recombination proteins [BR:
anu03400
]
117694617
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117694617
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
117694617
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
117694617
MMR (mismatch excision repair)
Other MMR factors
117694617
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117694617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
Motif
Other DBs
NCBI-GeneID:
117694617
NCBI-ProteinID:
XP_034341482
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All DBs
Position
X:90126584..90127228
Genome browser
AA seq
207 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKAPYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEDDEEDEEEEEEEEDEDDDE
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcctcatatgcattctttgtg
caaacctgccgggaggagcacaagaagaagcacccagatgcttctgtcaacttctcagag
ttctccaagaagtgctcagagaggtggaagactatgtctgctaaagaaaaggggaaattt
gaagatatggcaaaggctgacaaggctccttatgaaagagaaatgaaaacctacatccct
cccaaaggggagaccaaaaagaagttcaaggaccccaatgcacccaagaggcctccttcg
gccttcttcctgttctgttctgagtaccgcccaaaaatcaaaggcgagcatcctggctta
tccattggtgatgttgcaaagaaactaggagagatgtggaacaacactgccgcggatgac
aagcagccctacgagaagaaggctgccaagctgaaggagaagtatgaaaaggatattgct
gcctacagagctaaaggaaaacctgatgcagcgaaaaagggggtagtcaaggctgaaaag
agcaagaaaaagaaggaagaggaagatgatgaggaggatgaggaagaggaggaggaagag
gaagatgaagatgatgatgaataa
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