Arvicanthis niloticus (African grass rat): 117694667
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Entry
117694667 CDS
T08817
Symbol
Zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117694667 (Zc3h12b)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117694667 (Zc3h12b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
UBA_N4BP1_C
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
117694667
NCBI-ProteinID:
XP_034341533
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All DBs
Position
X:50095635..50131278
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AA seq
834 aa
AA seq
DB search
MTATAAVETPKMEKSASKEEKQQPKQEDSTDRGNADPEEWVNSESDPEQSFKSGHNSYQS
AVIQLKKKEMPSKPHRPLCRSPCLDRPSFSQSSILQDGKLDLEKEYQAKMDFALKLGYAE
EQIQSVLNKLGPESLINDVLAELVRLGNKGDSEAQVNLSLLLPRGASSREIASPELSLED
EVDNSDNLRPVVIDGSNVAMSHGNKEEFSCRGIQLAVDWFLDKGHKDITVFVPAWRKEQS
RPDAPITDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYR
DLQVEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHKKQPCP
YGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSTVKIMSEDTLAKCGTGMSTAKGE
ITSDIKRVASKRQSDPSIRSVAVEPEEWLSIARKPEASSVPSLVTALSVPTIPPPKSHAV
GALNTRSASSPVPGSSHFPHQKASLEHMVSMQYPPILVTNSHGAPINYTEQYPKFETMGD
HDYYSVLSDFSKLSINNMHNHEYYMAEASQGVYVRNPGLCTDSHMSHTRNDNYSSYNNLY
LAVADAHPEGTLKLHRSASHNHLQPFSHGYHEALARVQSYGSEDSKQAPHKQSVPHLAVH
TQNSATGAHSSSPGDYTMPPNIHAVGPSQPGRALVMTRMDSISDSRLYDSNPMRQRRPPL
CREQHASWDPLPCTTDSYGYHSYPLGNSLMQPCYEPVMVRSMPEKMEQLWRNPWVGMCND
SREHIIPEHQYQTYKNLCNIFPSNIVLAVMEKNPHTADAQQLAALIVAKLRAAR
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacggccacagctgcagtggagacaccaaaaatggagaagagtgcttccaaggaagag
aagcaacaaccaaagcaggaggacagcacagaccgaggcaatgctgatcctgaggaatgg
gtgaactctgagagtgaccctgaacagagctttaagagtggccacaacagctaccaatct
gcagttattcagttgaagaagaaagagatgccctccaagccacatcgcccgctctgtcgg
tcaccctgcctggaccggccaagcttctcccagagcagcattttacaggatgggaagcta
gacttggagaaagaataccaagccaagatggattttgctctcaagttgggctatgcagaa
gaacaaattcaatcagtacttaataaactaggcccagaatcacttattaatgatgtatta
gcagagcttgtcagacttggaaacaaaggtgattcagaagcacaagtcaacttgagtctg
ttattgccccgaggagctagctccagagagattgcaagccctgaattgtctcttgaagat
gaagtagacaatagtgataatttaagaccagttgttattgatggaagcaatgtggcaatg
agccatggaaataaagaagaattctcctgcagaggaatacaacttgctgtggattggttt
ctagacaaaggccataaagatatcactgtatttgtaccagcatggagaaaggagcaatcc
cgccctgatgcgccaattacagatcaagatattctacgtaaactggagaaggaaaagatt
ctcgtcttcacaccatcccgaagggtccaaggcagaagggtggtctgctatgatgatcgg
ttcatagtcaaattggcttttgattcggatggcatcattgtatccaatgataactaccga
gatcttcaagttgaaaagccagaatggaagaagtttatagaggaacggttgctgatgtat
tcttttgtgaatgataaatttatgccgccagatgatcctcttggacgccacggtccaagc
cttgagaatttcttaagaaagagacctgtggttcctgagcataaaaagcaaccgtgtcct
tatggcaaaaaatgtacctacggccacaagtgcaaatactatcatccggagcgggccaac
caaccccagcgttcggtggctgatgagctccgcatcagtgccaaactgtccacagtgaaa
ataatgagtgaagacaccctggccaaatgtggcacagggatgtctactgccaaaggtgag
ataacctcagatatcaaacgtgtggcctccaagcgccaatcagatcccagcatccggtct
gtggctgtagagcctgaggagtggctgtccattgctcgtaagcctgaagccagttctgtc
ccttcacttgtgaccgctttaagtgtccctacaatccctccccccaaaagccatgcagtg
ggtgcactcaacacccgttcagccagcagcccagtgccagggtcctcccattttccccat
caaaaggcctctttggaacacatggtcagcatgcaatatccacctatcctggttaccaac
agccatggcgcccctattaactatactgagcaatacccaaaatttgagaccatgggggac
catgactactattcagtgttaagtgacttctccaaactaagcatcaacaacatgcataat
catgaatattatatggctgaggcaagccagggggtttatgttcgtaatcccggcctgtgt
accgacagccatatgagccataccaggaatgacaactattcctcttacaacaacctgtac
ttggctgtagctgatgcccatcctgaaggcactttgaagctgcaccgctcagcatctcat
aaccatcttcagcctttttcccacggttaccatgaagccttagcaagagttcaaagttat
ggttcagaagattccaagcaagcaccccacaagcagtcagtccctcacttagctgtgcat
acccagaattcagcaactggagcacactctagctctcctggagactataccatgcccccc
aatatccatgctgtgggaccctctcagccaggccgtgctctggtgatgactcggatggac
agcatttctgactcccgcctctatgacagcaaccccatgaggcaaaggcggcctcctctg
tgcagggaacagcatgctagctgggacccattgccttgtacaaccgactcctatggatac
cactcctatccattaggtaacagcctcatgcaaccatgttatgaaccagtcatggtaaga
agcatgcctgaaaaaatggagcagctttggaggaatccttgggttggaatgtgcaatgat
tctagggagcatataataccagagcatcaatatcagacatacaagaacctctgcaacatc
ttcccttctaacattgttcttgcagtgatggagaagaatccccacacagcagatgctcaa
caactagcagccttgattgttgccaagctgagggctgcacgttga
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