Arvicanthis niloticus (African grass rat): 117694778
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Entry
117694778 CDS
T08817
Symbol
Sox3
Name
(RefSeq) transcription factor SOX-3 isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117694778 (Sox3)
Transcription factors [BR:
anu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117694778 (Sox3)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117694778
NCBI-ProteinID:
XP_034341646
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All DBs
Position
X:complement(117840127..117842247)
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AA seq
448 aa
AA seq
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MRPARENASGERSPRLPADFTRSPSASLPFLPELPARRPPNTTPTESPGLFTVAAPAPGA
PSPPATLAHLLPAPAMYSLLETELKNPVGPPTPAAGTGGPAAPVAAVKSNPNPAGGANAG
TGGSGAANGGGGGGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGA
DWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAA
AAAAAAAAAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAQPPSMSSPPPPPAL
PQMHRYDMAGLQYSPMMPPGAQSYMNAAAAAAAASGYGGMAPSAAAAAAAAYGQQPAAAA
AAAAAAMSLGPMGSVVKSEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASPL
PGGRLHGVHQHYQGAGTAVNGTVPLTHI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccagctcgagagaacgcatcaggtgagagaagcccgcgccttcccgccgacttc
acgcggagcccttcggcaagcctgcccttcctgcccgagctaccggcccgccggcccccg
aacaccactccgacggagtccccgggccttttcaccgtggccgctccagcccccggagcg
ccttctcctcccgccacgctggcgcacctccttcccgccccggcgatgtacagcctgctg
gagactgaactcaagaaccccgtggggccgcccaccccagccgcgggcaccggtggcccc
gcagctcccgtcgctgcggtcaagagtaacccgaacccagccgggggcgcgaacgcaggc
accgggggcagcggggccgcgaacggcggcggcggcggcggcggtggcgggggcagcgac
caggaccgcgtcaagcgacccatgaacgctttcatggtgtggtcccgcgggcagcggcgc
aagatggccctggagaaccccaagatgcacaactccgagatcagcaagcgcttgggcgcc
gactggaaactgctgaccgacgcggagaagcggccgttcatcgacgaggccaagcgactg
cgcgcggtgcacatgaaggagtacccggactacaagtaccggccccgccgcaagaccaag
acgctgctcaagaaggacaagtactcgctgcccggcggcctcctgcccccgggcgccgcc
gccgccgccgcagctgccgccgccgccgccgccgccagcagcccggtgggcgtgggccag
cgcctggacacgtacacgcacgtgaacggctgggccaacggcgcctactcgctcgtgcag
gagcagctgggctacgcgcagcccccgagcatgagcagcccgccgccgccgcccgcgctg
ccgcagatgcaccgctacgacatggccggcctgcagtacagccccatgatgccaccgggc
gcccagagctacatgaacgccgcggccgccgcggccgccgcctcgggctacgggggcatg
gcgccctccgccgccgcggccgccgccgccgcctacggccagcagcctgccgccgccgcg
gccgccgccgccgccgccatgagtctgggccccatgggctccgtggtgaagtcggagccc
agctcgccgccgcccgccatcgcttcgcactcgcagcgcgcctgcctcggtgacctgcgc
gacatgatcagcatgtacctgccacctggcggggacgcggccgacgccgcctctccgctc
ccgggcggccggctgcacggcgtgcaccagcactaccagggcgcggggactgcggtcaat
ggaacggtgccgctgacccacatctga
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