Arvicanthis niloticus (African grass rat): 117694783
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Entry
117694783 CDS
T08817
Symbol
L1cam
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04360
Axon guidance
anu04514
Cell adhesion molecule (CAM) interaction
anu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117694783 (L1cam)
04517 IgSF CAM signaling
117694783 (L1cam)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
117694783 (L1cam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117694783 (L1cam)
04090 CD molecules [BR:
anu04090
]
117694783 (L1cam)
04091 Lectins [BR:
anu04091
]
117694783 (L1cam)
Cell adhesion molecules [BR:
anu04515
]
Immunoglobulin superfamily
L1 family
117694783 (L1cam)
CD molecules [BR:
anu04090
]
Proteins
117694783 (L1cam)
Lectins [BR:
anu04091
]
I-type lectins (Siglecs)
117694783 (L1cam)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Fn3_ROS1
Ig_5
Ig_PDGFR_d4
Fn3_VIN3
Ig_C17orf99
Ig_VSIG10L2_N
C1orf162
Motif
Other DBs
NCBI-GeneID:
117694783
NCBI-ProteinID:
XP_076774849
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All DBs
Position
X:complement(128480199..128505791)
Genome browser
AA seq
1259 aa
AA seq
DB search
MVVVLRYLWPLLLCGPCLLIQIPDEYKGHHVLEPPVITEQSPRRLVVFPTDDISLKCEAR
GRPQVEFRWTKDGIHFKPKEELGVVVHESPYSGSFTIEGNNSFAQRFQGIYRCYASNKLG
TAMSHEIQLVAEGAPKWPKETVKPVEVEEGESVVLPCNPPPSAAPLRIYWMNSKILHIKQ
DERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKPTNSMIDRKPR
LLFPTNSSSHLVALQGQSLILECIAEGFPTPTIKWLHPSDPMPTDRVIYQNHNKTLQLLN
VGEEDDGEYTCLAENSLGSARHAYYVTVEAAPYWLQKPQSHLYGPGETARLDCLVQGRPQ
PEVTWRINGMPMEKVNKDQKYRIEQGSLILSNMQPSDTMVTQCEARNQHGVLLANAYIYV
VQLPARILTKDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGT
LGIRDLKANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSAIEKKGARVTFTCQA
SFDPSLQASITWRGDGRDLQERGDSDKYFIEDGQLVIQSLDYSDQGNYTCVASTELDEVE
SRAQLLVVGSPGPVPHLELSNRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEK
WFSLGKVPGNQTSTTLKLSPYIHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDV
RGEGNETNNMVITWKPLQWMDWNAPQIQYRVQWRPRGKQETWKEQTVSDPFLVVSNTSTF
VPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQV
KGHLRGYNVTYWWKGSQRKRSKRHVHKSHMVVPANTTSAILSGLRPYSSYHVEVQAFNGR
GLGPASEWTFSTPEGVPGHPEALHLECQSDTSLILHWQPPLSHNGVLTGYLLSYHPLDGE
SKEQLFFNLSDPELRTHNLTNLNPDLQYRFQLQATTQQGPGEAIVREGGTMALFGKPDFG
NISATAGENYSVVSWVPREGQCNFKFHILFKALPEGKVSPDHQPQPQYVCYNQSSYTQWN
LQPDTKYEIRLMKEKVLLHNLAVKTNGTGPVRVSTTGSFASEGWFIAFVSAIILLLLILL
ILCFIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKAFGSSQPSLNGD
IKPLGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGATSPINPAVALE
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtggtgctgcggtacttgtggcctctcctcctctgcggcccctgccttctcata
cagattcctgatgaatataaaggacatcatgtgctagagccacctgtcatcacagaacag
tctccacggcgcctggttgtctttccaacagatgacataagcctcaaatgtgaagccaga
ggcagaccccaagtggagttccgctggacgaaagatggcatccacttcaaacccaaggaa
gaattgggtgtagtggtgcacgagtcaccctattctggctccttcaccatcgaaggcaac
aacagctttgcccagaggtttcagggcatctatcgctgctatgccagcaataagctagga
actgccatgtcacatgagattcagctggtggccgagggtgcccccaagtggccaaaggaa
actgtaaaacctgtggaagtggaggaaggagaatcagtagttctgccttgcaaccctcca
cccagtgcagccccacttaggatctactggatgaacagcaaaattttacacatcaaacaa
gatgagcgagtgtccatgggccagaatggagacctatattttgccaatgtgcttacctca
gacaatcattcagactacatctgcaatgcccacttccctggcacccgaaccatcattcaa
aaggaacctattgacctccgggtcaagcccaccaacagcatgattgaccggaagccacgt
ctgcttttccccacaaactccagcagccacctggtggccttgcagggccagtcattgatc
ctggagtgcattgctgagggattccctacacccaccatcaagtggctgcaccccagtgat
cctatgccaacagaccgtgttatctaccaaaaccacaacaagaccctgcaactactcaat
gtgggagaggaggatgatggcgagtatacctgccttgctgagaactcgctgggcagtgcc
cggcatgcctactatgtcactgtggaagctgccccatactggctgcagaagccccagagc
catttgtatgggccaggagagactgcccgcctagactgcctagtccagggcaggccccaa
ccagaggtcacatggagaatcaacggcatgcctatggagaaggtgaacaaggaccagaag
taccggattgagcaggggtctctgatcctgagtaacatgcaaccaagtgacacaatggtg
acccagtgtgaagcccgcaaccagcatggggtcctgctagccaatgcctacatctatgtt
gtccagctcccagccaggatcctaacgaaagataatcagacatacatggcagttgagggc
agtactgcttacttgctgtgcaaagcctttggagctcctgttcccagtgtccagtggctg
gatgaagaaggaaccacggtgcttcaggatgaacgatttttcccctatgccaatggaacg
ctgggcatcagagacctcaaggccaatgacactggacgctatttctgccaggctgccaat
gaccagaacaatgtgaccattttggctaacctacaggttaaagaagcaacccagatcaca
caggggccgcggagcgcaattgagaagaaaggtgcaagggtgacattcacgtgccaggcc
tcctttgacccctctttgcaggccagcatcacttggcgtggagatgggagagacctccag
gaacgtggggacagtgacaagtatttcatagaagatgggcaactggtcatccagagtctg
gactacagtgaccaaggcaactacacttgtgtggctagcactgaactggatgaagtggag
agcagggcacagctcttagtggtggggagccctggaccagtgcctcacctggagctgtcc
aaccgccacctgctgaagcagagccaagtgcacttgtcttggagccctgctgaagaccac
aactctcccattgagaagtatgacattgaatttgaagacaaggaaatggctcctgagaaa
tggttcagtctgggcaaggtgccaggaaatcagacctctactaccctcaagctgtcccca
tatatccactatacctttcgggtcactgctattaacaaatatggtcctggagaacccagc
cctgtctctgagactgtggtcacacctgaggcagccccagagaagaaccctgtggatgtg
agaggggaagggaatgagaccaacaatatggtcatcacatggaagcctcttcagtggatg
gattggaatgccccccagattcagtaccgtgtacagtggcgtccacggggcaagcaggag
acctggaaggaacagactgtgagcgaccccttcctggtggtgtctaacacttccacattt
gtgccttatgagatcaaagtccaggcagtgaacaaccagggcaagggccctgagccccag
gtcaccattggctattcaggggaagactatccccaggtgagccctgagcttgaagacatc
acaatcttcaactcaagcactgtgctggtcaggtggaggcctgtggacttggcccaggtt
aagggccacctcaggggatacaatgtaacatactggtggaagggcagtcagagaaagcgc
agcaagaggcatgtccacaaaagccacatggtggtacctgcgaacaccaccagtgccatc
ctcagtggtttacgtccttacagctcttatcatgtggaggtacaggcctttaatgggcgg
ggcttggggcctgcaagtgaatggaccttcagcaccccagagggagtgcctggccaccct
gaggcattacacctggagtgccagtcggacactagcctgatactgcactggcagccacca
ctcagccacaatggagtgctcactggctacctgctctcttatcatcccttggatggggaa
agcaaagagcagttgttcttcaacctttcggacccagagctccggactcataatctcacc
aacctcaaccctgatctacagtaccgcttccagcttcaggctactacccagcagggtcct
ggtgaggccattgtgcgtgaaggaggcaccatggccctgtttggcaagccagattttggc
aacatctcagccacagcaggtgaaaactacagcgtggtctcctgggtccctcgggagggc
cagtgcaatttcaagtttcatatcttgttcaaagccttgccagaagggaaagtgagtcct
gatcaccagcctcagcctcagtatgtgtgctacaatcagagctcctacacacagtggaac
ctacagcctgacaccaaatatgagatccgtctgatgaaggagaaggtcctcctgcacaat
ctggctgtgaagactaatggcactggccctgtgcgagtttctactacaggtagctttgcc
tccgagggctggttcattgcctttgtcagcgctatcattctcttgctcctcatcctgctc
atcctctgcttcatcaaacgcagcaagggcggcaaatactcagtgaaggacaaggaggac
actcaggtagattccgaggcccggcccatgaaagacgagaccttcggcgagtacaggtcc
ctggagagtgacaatgaagagaaagcttttggcagcagccagccatctctcaatggagac
atcaaacccctaggcagtgatgacagcctggctgattatgggggcagtgtggacgtccag
ttcaatgaggatggctctttcatcggccagtacagtggcaagaaagagaaggaggcagca
ggaggcaatgacagctcaggggctacctctcctatcaatcctgcagtagccttagaatag
DBGET
integrated database retrieval system
