Arvicanthis niloticus (African grass rat): 117694819
Help
Entry
117694819 CDS
T08817
Symbol
Igsf1
Name
(RefSeq) immunoglobulin superfamily member 1 isoform X1
KO
K26168
immunoglobulin superfamily member 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117694819 (Igsf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
V-set
Motif
Other DBs
NCBI-GeneID:
117694819
NCBI-ProteinID:
XP_034341720
LinkDB
All DBs
Position
X:complement(109504222..109519663)
Genome browser
AA seq
1317 aa
AA seq
DB search
MMLRTFTLLLFFIWLNRGLTSMAEESQPELWIESNYPQAPWENITLWCKSPSQVSNKFLL
LKDNTQMTWIRPPYKTFQVSFFIGALTESTTGLYRCCYWKEKGWSKPSKILELEAPGQLP
KPIFWIQAETPPLPGCNVNILCHGWLQDLVFMLFKEGYTEPLDYQAPTGTMAIFSIDNLA
PENEGVYICRTHIQMLPTLWSEPSNPLKLVVAGLYPKPTLTAHPGPILAPGESLSLRCQG
PIYGMTFALMRLEDLKKSFYYKKPIKNEAYFYFQDLKIQDTGHYLCFYYDGSYRGSLLSD
ILKIWVTDTFPKTWLLVQPSPVIQMGQNVSLRCGGLMDGVGLALYKEGEEEPLQFLDASS
NTGNSSFFLKNVTYRDAGIYSCHYYLTWRTSIKMATYNTVELMVVAWPSSVFKVGKIITL
QCRVSHPVLEFSLEWEERTTFQKFSVDGDFIITNIEGQGTGTYSCSYRIEAHPNNWSDRS
KPLKLVGPAGFLTWNSILNEGIRVSLTMQLVSLLLLVVWIRWKCRRLRLREAWLLGTAQG
VAMLFILMTLLCCGLCNGTLTEEIEIIMPTPKPELWAETNFPLAPWKNLTLWCRSPSGST
KEFVLLKDGTGWIATRPASEQVRAAFPLGALTHSHTGSYHCHSWEEMAVSEPSEALELVG
TDILPKPVISASLPIRGQELQIRCKGWLEGLGFALYKKGEQEPVQQLGAVGREAFFTIQR
MEDKEEGNYSCRTHTEMQPFKWSEPSVPLELVIKEMYPKPFFKTWASPVVTPGSRVTFNC
STPHEHMSFILYKDGNEIASSDPAWGTPGTSTAHFLIISVGIGDGGNYSCRYYDFSIWSE
PSDPVELIVTEFYPRPTLLAQPGPVVLPGKNVTLRCQGIFQGMRFALLQEGTHAPLQFQS
ASGTSVDFLLHTVGAEDFGNYSCVYYETTMSNRGSYLSTPLMIWVTDTFPRPWLSAEPSS
VVTMGQNVTLWCQGPVRGVGYILHKEGEATSMQLWGSTSNEGAFPIINISGASIGRYSCC
YHPDWMSPIKIQPSNTLELIVTGLLPKPSLLAQPGPMVAPGENMTLQCQGELPDSTFVLL
KEGTRQPLEQQRPSGYRADFWMPVVRDQDSGVYSCVYYLDSAPLAASNHSNSLEIWVTDK
PPKPSLSAWPSTVFKLGKDIILQCRGPLPGVEFVLEHDGEEAPQQFSENGDFVIDNMEGK
GIGNYSCSYRLQAYPDIWSEPSDSLELVGAAGPVAQECTVGNIVRSTLIVVVVVALGIVL
AIEWKKWPRLRTRGSETDGKDQTIVLEECNQEGEPGTTTNSPSSALQEVSVDLTVPI
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttcgaaccttcactcttttgctctttttcatttggctcaatcggggtctaact
tcaatggcagaggagtctcaaccagagctatggatagagtccaactacccccaggcccct
tgggagaacatcacactttggtgcaaaagcccctctcaagtatccaacaagttcctgcta
ctgaaggataacacacagatgacctggattcgtcctccttacaagaccttccaagtttca
ttcttcataggtgccctcactgagtccactacaggtctttatcgatgctgctactggaag
gagaaaggctggtcaaaacccagtaaaattctagagctagaagcaccaggccaactccct
aaacctatcttctggatccaggcagagactccccctcttcctggatgcaatgttaatatc
ctctgccatggatggcttcaggatttggtatttatgttgtttaaagagggatacacagag
cccttagattaccaagccccaactgggacaatggccatcttctccattgacaacttggca
cctgagaatgaaggggtttacatctgccgcactcatatccagatgctccccactctgtgg
tcagagcccagcaaccccctgaagttggtggtagcaggtctctaccccaaaccaactctg
acagcccatcctgggcccatcctggcaccaggagaaagcctgagtctcaggtgccaaggg
ccaatatacggaatgacgtttgctttaatgaggttggaagacttgaagaaatcgttttac
tacaagaagccaataaaaaatgaggcatatttctacttccaggatttgaagatacaggat
acagggcactacctctgtttttactatgatgggtcatacaggggctcattgcttagtgat
atcctgaaaatctgggtgactgatactttccccaagacctggctacttgttcagcccagt
cctgtgattcaaatgggtcaaaacgtgagcctgaggtgtggaggactgatggatggagtg
ggtcttgcactctataaggagggagaagaagagccccttcagtttctggatgcatccagc
aacactggcaacagttcattcttcctaaagaatgtgacctacagggatgctggcatctat
agctgccactattaccttacctggaggacatccattaagatggcaacatacaacactgtg
gagctgatggttgtagcttggcccagttccgtgttcaaagtaggaaagatcatcaccctt
cagtgccgagtgtctcatccagtacttgaattttctttggaatgggaagaaagaacaaca
ttccaaaagttctcagtagatggagacttcatcatcactaacattgaagggcaaggcaca
ggaacctacagttgcagctatcgtatcgaggcacaccctaacaactggtcagatcgcagt
aagcctctgaagttggtggggccagcaggcttcctcacctggaattccattctgaatgaa
ggtatcagggtgtccctaaccatgcagcttgtttccttgctgttgctagtggtgtggata
cggtggaagtgtcgaagactgagactcagagaagcctggttgttgggaacagctcaaggg
gtcgccatgctcttcatactcatgactcttctttgctgtgggctgtgcaatgggacattg
acagaggagattgaaataatcatgccaacccctaagcctgaactgtgggcagagacgaac
ttccctctggccccgtggaagaacttaaccctctggtgcagaagcccttctggctcaact
aaggagtttgtgttactgaaggacgggaccgggtggattgcaactcgtccggcctcagag
caggtccgggctgccttccctcttggcgccctgacccacagccacaccgggagttaccac
tgccattcatgggaggagatggctgtgtcggagcctagtgaagcacttgaactagtgggg
acagacatccttcccaaacctgtcatttcggcttcccttccaatccggggccaggaactg
cagatccgctgtaaaggatggctggaaggtttagggtttgctctgtataagaagggagag
caagaacctgtccagcaacttggtgctgttgggagagaagccttctttacaattcaaaga
atggaggataaagaggagggcaattacagctgccgcactcacacggaaatgcagcccttc
aagtggtctgagcccagtgtgcccctggagcttgtcataaaagaaatgtaccccaagcct
ttcttcaagacatgggctagccccgtggtcactcctggttcccgagtgactttcaattgt
tctaccccccatgaacacatgagctttattctttataaggatggcaatgaaattgcatcc
agtgacccagcttggggaaccccaggaactagtacagcccactttctgatcatttcagtg
ggcattggtgatggaggaaactatagctgccgttattatgacttttccatctggtctgag
cccagtgaccccgtggagctcattgtgacagaattctaccccagacccactcttctggca
caaccaggccccgtggtgcttcctgggaagaatgtgaccctgcgctgccaaggaattttc
cagggcatgaggtttgccctcttacaggagggcactcatgctcccttacagttccagagt
gcctcggggacctcagttgactttctcctccatactgttggagcagaggactttgggaac
tacagctgtgtctactatgagacaaccatgtctaacagaggctcataccttagtaccccc
cttatgatctgggtgactgacacattccccagaccatggttgtctgctgagcctagttct
gtggtcaccatggggcagaatgttactctatggtgtcaaggaccagtccgtggagttggg
tacattctgcacaaagaaggtgaagccacttcgatgcagctttgggggtccactagtaat
gaaggagcattccctatcatcaatatatctggtgctagcataggccgttatagctgctgt
taccaccctgactggatgagcccaatcaagatacagcctagcaacactctggaactcata
gtcaccggtttactccccaagcccagcctgttagcccagcctggtcccatggtagcccct
ggagaaaacatgactcttcaatgtcaaggagaactgccagattcaacatttgtcctgttg
aaggaagggacacgacagcccttagaacaacagaggccaagtgggtacagagctgacttc
tggatgccagtggtgagggatcaagattctggtgtttacagctgtgtttattatctggat
tctgctccccttgcggcatcgaatcacagcaactctctagagatctgggtgaccgataag
ccccctaaaccctcactgtcagcctggcccagtactgtgttcaaactaggcaaggacatc
atccttcagtgccggggacccctgccaggagttgaatttgtgctagaacatgatggagaa
gaggccccccaacagttctcggagaatggagattttgtcatcgacaacatggaagggaaa
ggcattggaaactacagttgcagctaccggctacaggcctaccctgacatctggtcagag
cccagtgattccctggagctggttggagcagcagggcctgttgctcaagagtgcactgtg
ggtaacattgtccgaagtaccctgattgtggtggttgtggtagccttggggatagtgcta
gccatagagtggaagaaatggcctcgacttcggactaggggctctgagacagatggaaaa
gatcagaccatagtccttgaagagtgcaaccaagaaggagaaccgggcactaccaccaat
tctccttcatctgccttgcaggaagtttcagtggatctgacagtcccaatataa
DBGET
integrated database retrieval system
