Arvicanthis niloticus (African grass rat): 117695021
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Entry
117695021 CDS
T08817
Name
(RefSeq) Y-box-binding protein 3-like
KO
K06099
cold shock domain protein A
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117695021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117695021
03041 Spliceosome [BR:
anu03041
]
117695021
Transcription factors [BR:
anu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
117695021
Spliceosome [BR:
anu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117695021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Rho_RNA_bind
Motif
Other DBs
NCBI-GeneID:
117695021
NCBI-ProteinID:
XP_034341850
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All DBs
Position
X:70819479..70825575
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AA seq
212 aa
AA seq
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MSEAGEATTCDTTLPQAADPAPKSPAASGTPQAPAPAAPLAGSPGRDAAPGPAPASSAPV
DSEDSEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGE
GEIVEFDVVVGKGGPKATNVTGPDGVPVEGSHYAVRRRPPHNAGEIRQMKDGVLKGTQLL
VHQNPTYRPRFRRGPAHPRTSPYRSLQVFLSE
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcgggcgaggccaccacctgcgacaccacgctcccgcaggccgctgaccct
gcgcctaagagccctgcggccagcggcacgccccaggccccggcgccagccgcgcccctc
gcggggagccctggcagagacgcagcccccggacccgccccggcctcttcagctcccgtg
gacagcgaggactcggagaagaaagttctcgccaccaaagtccttggcactgtcaaatgg
ttcaacgtcagaaatggatatggatttataaaccgaaatgacaccaaagaagatgtgttt
gtacaccagactgccatcaagaagaataatccacgcaagtatctgcgcagtgtgggggag
ggagaaattgtagagtttgatgtggttgtaggaaaagggggtcctaaagcaacaaatgtg
actggcccagatggagttccagtagaagggagccactatgctgtgcgccgtagacctccc
cataatgctggtgagattagacagatgaaagatggagtcctcaagggaacacaactcctg
gtccatcagaatccaacctaccgcccgaggttccgcaggggacccgctcacccacgcacg
agcccatatcgttccctacaggtgtttctgtctgaatga
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