Arvicanthis niloticus (African grass rat): 117695213
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Entry
117695213 CDS
T08817
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
anu04054
]
117695213
Pattern recognition receptors [BR:
anu04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117695213
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_1
LRR_9
LRR_EndoS
DHU1_N
ThsB_TIR
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
117695213
NCBI-ProteinID:
XP_034341952
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Position
X:59238325..59253087
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AA seq
956 aa
AA seq
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MPKAVKMSGDSLVSSLQFLFMLAGLSLLSSAEAYGFNKCTQYEFDIHHVFCIRKKITNLT
EAISDIPRYTTHLNLTNNHIQVLPPGSFINLSALVDLRLEWNSIWKIDKGAFRGLENLTL
LNLVENKISSVTNFFEGLSNLETLLLSHNQITHVHKDAFTPLGKLKYLSLSRNSISNFSG
ILEAVQHLPCLEHLDLTNNSIMYLDHSPRSLVSLTHLSFQGNKLIELNFSTLSLPNLTTL
SASQNGHGLIQNVYLETLPQLKSLNLSGTMVKLEMLSAKHLQNLRVMDLSNRELRHGHLN
IKTVCYLLRNLPMLETLVFQKNATNAEGIKQLAKCTRLLVLDLGQNSDLVHLNDSEFNSL
PSLQRLNLNKCQLSFISNRTWGSLQNLTILDLSHNKFKSFPDFAFSPLKRLEFLSLSRNP
ITELNNLAFSGLFSLKELNLAACWIVTIDRYSFTPFPNLEVLDLGDNNIRTLNHRTFRPL
KNLQALILSHNRLEIMEPNAFSGLTNLSYLDLMYNSLSYFHKHLFSGLEKLLVLKLGFNK
ITYETTRTLQYPPFMKLKSLKQLNLEGQKHGIQVVPSNFFQGLSSLQELLLGKNPSVFLD
HYQFDPLINLTKLDISGTKDGDRSLYLNASLFRNLKKLKILRLENNNLESLVPGMFSSLQ
SLQVFSLRFNNLKVINQTHLENLKSLMFFDVYENKLQCTCDNLWFKNWSVNTEEVHIPFL
RSYPCQQPDSQSLLIDFDDAMCNFDLGKVYFLCSFSMVVSTMVFAWFSAKMTASLWYGLY
ICRAWYLTKWHKTEKKFIYDAFVSFSATDEAWVYKELVPALEEGSQTTFKLCLHQRDFEP
GIDIFENIQNAINTSRKTLCVVSNHYLHSEWCRLEVQLASMKMFYEHKDVIILIFLEEIP
NYKLSSYHRLRKLINRQTFITWPDSAHQQPLFWARIRNALGNETVEKENTHLIVVE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaggcagtcaagatgagtggggacagccttgtgtcttctctacagttcctgttc
atgttagcaggactttctctgctgtcttcagcagaggcatatgggttcaacaagtgcaca
cagtatgaatttgatattcaccatgtgttctgcattcggaagaagatcaccaacttgaca
gaggccattagtgacatacctagatatactactcacctcaaccttacaaacaaccacatt
caagtccttcctcctgggagcttcattaatctgtctgctctggtggacttgagactagag
tggaactcaatttggaagatcgacaaaggtgcctttaggggacttgaaaatttgactctg
ctgaatttagtggaaaataagatttcaagtgtgactaactttttcgaaggcctgtccaac
ctggagaccttgcttctgagccacaatcagatcacccatgttcacaaagacgcctttact
cctctaggcaaactgaaatatttgagcctatctcgaaacagcattagcaatttttctggt
attcttgaagcagtccagcatcttccatgcctggagcaccttgatcttactaacaacagc
atcatgtacttggaccacagccccaggtcactggtttctttgacccacctgagtttccag
gggaacaaactaatagagttaaacttctctactttatcactgcccaacttaaccactcta
agtgcttcccagaatggccatggactcattcagaatgtgtatctggaaactctgccccaa
cttaaaagcttgaatctgagtggaacaatggtgaaattggagatgctttcagccaaacac
ctgcagaatttaagggttatggatctcagtaaccgggagcttagacatggccacttaaat
ataaaaactgtttgttacctcctcagaaacctacccatgttagagacactggtttttcag
aagaatgccaccaatgcagagggcattaagcagctggcaaagtgtaccaggctcttggtc
cttgacctgggccaaaatagtgacttggttcatctcaatgacagcgagttcaattctctg
cccagtctccaaagactgaatctgaacaagtgccagctctctttcatcagcaacaggacc
tggggttccttgcagaacttgaccatcctagatctgagccataacaagtttaaaagcttt
ccagattttgcgttttcccctttgaagcgcttggagtttctctctctttcgagaaacccc
atcacagaactcaataatctggccttcagtgggctattttcactgaaggagctcaactta
gctgcgtgttggattgtaacaattgacaggtattcctttacaccgtttccaaacttagag
gtcttagatcttggagacaacaatattcggactctcaaccacagaaccttccgacctctg
aaaaatctccaggctttgattctctcccacaaccgcctggaaatcatggagccgaatgca
ttttctggactcactaacctaagttaccttgacctgatgtacaatagcttgtcatatttt
cataaacaccttttctcaggccttgaaaagctgctggttttgaaacttggttttaataag
atcacgtatgaaactactaggacccttcagtatcctccatttatgaagctcaagtctttg
aaacagctcaacctagaaggacaaaaacatgggattcaggttgttccgagcaactttttc
caagggttgagtagtttgcaggagctactcttaggaaaaaacccatcggtattcctggac
cactaccaatttgaccctctgattaatctcacaaagttggatatctcaggaacaaaagat
ggagatcgaagtctctatttaaatgcttccttattccgaaacctcaaaaagctaaagatc
ctccgccttgaaaataacaacttagagtcattggttcctggcatgttctccagcttacag
agcctccaggtcttctctttaagattcaacaacttgaaggtcattaatcaaactcatctg
gagaatctgaaatcattgatgttttttgatgtctatgagaacaaacttcagtgcacctgt
gacaatttgtggttcaagaactggtcagtaaacacagaggaggtccacatccccttcctc
cggagctatccttgtcagcagccagacagccagagtttgcttatagattttgatgatgcc
atgtgtaattttgacttaggaaaggtctacttcttatgttccttcagtatggtcgtcagc
accatggtcttcgcttggttcagtgccaagatgactgcatctctgtggtatggtttgtac
atatgtagggcctggtacctcactaaatggcacaaaacagagaagaagttcatatatgat
gcatttgtctctttctcagccactgatgaggcgtgggtatacaaagagcttgttccagcc
ctagaagaaggcagccagaccacctttaaactgtgtcttcaccaacgggactttgaacca
ggcattgacattttcgagaacattcagaatgctattaacacaagcaggaaaaccttgtgt
gtagtcagtaaccactacctacacagtgaatggtgccggcttgaagtccagctggctagc
atgaagatgttttatgagcacaaggatgtcattatcttgatcttccttgaagagattcca
aactataagctgtccagctaccaccgactcaggaaactcataaacagacagacgtttatc
acttggccagacagtgctcaccagcagccactcttctgggctcgcatcagaaatgcattg
ggcaatgagactgtggagaaagaaaatacacatctaattgttgtcgagtga
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