Arvicanthis niloticus (African grass rat): 117695242
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Entry
117695242 CDS
T08817
Symbol
Dkc1
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1 isoform X1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117695242 (Dkc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
anu03009
]
117695242 (Dkc1)
03032 DNA replication proteins [BR:
anu03032
]
117695242 (Dkc1)
Ribosome biogenesis [BR:
anu03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
117695242 (Dkc1)
Prokaryotic type
117695242 (Dkc1)
DNA replication proteins [BR:
anu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
117695242 (Dkc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
PUA_elF2D
UPF0113
Motif
Other DBs
NCBI-GeneID:
117695242
NCBI-ProteinID:
XP_034341982
LinkDB
All DBs
Position
X:129511896..129525507
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AA seq
533 aa
AA seq
DB search
MPKPRGEPEGKPTRARVIYQPSQPSVWPHKLITFPKKHKKKKDRKPLQEDVAEIQHAEEF
LIKPESKVAQLDTSQWPLLLKNFDKLNVRTTHYTPIPCGSNPLKREIGDYIRTGFINLDK
PSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGI
VRLHNAIEGGTQLSRALETLTGALFQRPPLIAAVKRQLRVRTIYESKMIEYDPERRLGIF
WVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMNEKDHMVTMHDVLDAQWLYDNH
KDESYLRRVVYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVI
TTKGEAICMAVALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKKMMIKQG
LLDKHGKPTDNTPATWKQDYIDYSDSGKKAEAVQAPQLAAEAVNVIKRKRDSESESDETP
TTVPQLKKEKKKKNKDKKPKTVLESGGEAGDGDSETTKKKKKKKVKVVEEMSD
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagccacgtggagaacccgaagggaagccaacacgtgctagagtcatttaccag
ccaagccagcctagtgtttggcctcacaaactaattactttcccaaagaagcataagaag
aaaaaagaccggaagccattacaagaagatgtagccgaaatacaacatgctgaagaattt
cttatcaaaccagaatccaaagtggctcaattagacacttcgcagtggcccttgttactt
aagaattttgataagctaaatgtaaggacaacacactatacacctattccttgtggttca
aatcctctgaagagggagattggggactatatcaggacaggtttcattaatcttgacaag
ccctctaacccctcttcccatgaggtggtagcctggatccgacgaatacttcgggtagag
aagactggccacagtggcacactggatcccaaagtgactggttgtttaattgtgtgcatt
gaacgagccactcgtttggtgaaatcacaacagagtgcaggcaaagagtatgttggaatt
gtccggctgcacaatgctattgaagggggtactcagctttctagggccctagaaactctg
acaggtgcactgtttcagagacccccacttattgctgcagtaaagaggcagcttcgagta
aggactatctatgagagcaaaatgatagaatatgatcctgaaagaagattaggaatcttt
tgggtgagctgtgaagctggcacctacattcggacactatgcgtgcaccttggcttgtta
ctaggagttggtggtcagatgcaggaacttcggagggttcgttctggagtcatgaatgag
aaggaccacatggtgacaatgcatgatgtacttgatgctcagtggctgtatgataaccat
aaggatgagagttatttacggcgcgttgtttatcctttggaaaagctgttgacatctcat
aaacgtctggttatgaaagatagtgcagtgaatgcaatctgctatggggccaagatcatg
cttccgggtgttcttcgatatgaggatggcattgaggtcaaccaggagattgtggtcatt
accactaagggggaagctatctgcatggcggttgcattgatgactacagcagtgatttct
acctgtgaccatggtatagtagccaagataaagagggtgatcatggaaagagacacttat
cctcgaaagtggggtttaggtccaaaggcaagtcaaaaaaagatgatgatcaaacagggc
cttctggacaagcatggtaaacccacagacaatacccctgccacatggaaacaggattac
attgactatagtgattctggcaagaaagctgaagcagtacaagctcctcagttagctgct
gaagcagtaaatgtcataaaaaggaagcgggatagtgagagtgaaagtgatgagacccct
acaacagttcctcagttgaagaaggaaaagaagaagaagaataaggataaaaagcccaaa
actgtgttagaaagtgggggagaggctggagatggggacagtgagaccacgaaaaagaaa
aagaagaagaaagtaaaagtggtggaagagatgtcagattag
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