Arvicanthis niloticus (African grass rat): 117695256
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Entry
117695256 CDS
T08817
Symbol
Nyx
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
anu00535
]
117695256 (Nyx)
Proteoglycans [BR:
anu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
117695256 (Nyx)
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRRNT
Motif
Other DBs
NCBI-GeneID:
117695256
NCBI-ProteinID:
XP_034341999
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Position
X:complement(6720063..6742710)
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AA seq
476 aa
AA seq
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MLILLLHAVLFSLPCTRATEACLRACPAACTCSTVERGCSVRCDRAGLQRVPTEFPCEVA
SIDLDRNGLRILGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGELRY
LHVRTFAALGRLRRLDLAACRLFSVPERLLAELPALRELTAFDNLFRRVPGAIRGLANLT
HAHFERSRIEAVASSSLLGMRRLRSLNLQANRVRAVHAGAFGDCGALEDLLLNDNLLASL
PAAAFRGLRRLRTLNLGGNALGSVARAWFSDLPELELLYLDRNSITFVEEGAFQNLSGLL
ALHLNGNRLTVLSWAAFQPGFFLGRLFLFRNPWRCDCQLEWLRDWMEGSGRVADVACASP
GSVAGQDLSQVVFERSSDGLCVDPDELNFTTSSPGPSPEPVATTVSRFSSLLSKLLAPRA
PIEEGANTTWELVNVSLNDSFRSHGVMVSCYKATFLFTSFLLLSLTQYVVLGLQRD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcctccttcttcatgcggtgctcttcagcctgccctgcacccgggccaccgag
gcctgtctgcgggcctgccctgcggcctgcacctgcagtaccgtggagcgtggctgctca
gtgcgctgtgaccgtgcgggcctccagcgggtgcccactgagtttccgtgcgaggtggcc
tccatcgacctggaccggaatggcctgcgcatcctgggcgagcgggcctttggcacgctg
ccgtcgttgcgccgcctgtcgctgcgccacaacaacctgtccttcatcacacccggcgcc
ttcaagggcctgccgcggttggccgagctgcgcctggcgcacaacggcgagctgcgctac
ctgcacgtgcggaccttcgcggccctgggccgcctgcgccgcctggatctggcggcctgc
cgcctcttcagcgtccccgagcgtctcctggccgagctgccggcccttcgggagctcacg
gccttcgacaatctcttccgccgggtgcccggcgcgatccggggcctggctaacctgacg
cacgcgcatttcgagcgcagtcgcatcgaggccgtggcctccagctcgctgctgggcatg
cggcgtctgcgctcgctcaacctgcaggccaaccgcgtgcgcgcggtgcatgccggggcc
tttggcgactgtggcgccctggaggacctgctgctcaacgacaacctgttggcctcgctg
cccgccgccgccttccgcggccttcgccgcctgcgcaccctaaatctgggcggcaacgcg
ctgggcagcgtggcacgcgcctggttctccgacctgccagagctcgagctgctgtacctg
gaccgcaacagcatcacctttgtggaggaaggcgccttccagaatctctcgggcctcctg
gctctgcatctcaatggcaaccgcctcactgtgctctcctgggccgccttccagccaggc
ttcttcctgggccgcctcttcctcttccgcaacccgtggcgctgcgattgccagctggag
tggctgcgtgattggatggagggctctgggcgcgtggctgatgtggcgtgcgcctcccca
ggctctgtagccggccaggacctcagccaggtggtctttgagcgctcctctgatggcctc
tgcgtggaccccgatgagctgaacttcaccacgtccagtccaggcccgagtccagagcca
gtggccaccactgtgagcaggttcagcagcctcctctccaagctgctggccccaagggcc
cctatagaggagggagccaacaccacctgggagctggtcaacgtctcattgaatgacagc
tttcggtcccatggagtgatggtctcgtgctataaggccacctttctcttcacctctttc
ctcttgctcagcctgacccagtatgtggtgttgggcctgcagagggactga
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