Arvicanthis niloticus (African grass rat): 117695406
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Entry
117695406 CDS
T08817
Symbol
Rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
anu03009
]
117695406 (Rrp12)
Ribosome biogenesis [BR:
anu03009
]
Eukaryotic type
90S particles
Other 90S particles
117695406 (Rrp12)
Pre-60S particles
Other pre-60S particles
117695406 (Rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
117695406
NCBI-ProteinID:
XP_034342176
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All DBs
Position
1:complement(148338320..148370720)
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AA seq
1294 aa
AA seq
DB search
MGRSGKLPSGVSAKLKRWKKGHSSDSNPATCRHRQAARSRFFSRPSGKSDLTVDAVKLHN
ELQSGTLSLGKSQAPETTMDQDPEVAFTEKSSGTFLSGLSDCTNVTFSKVQRFWESNSAA
HKEICAVLAAVTEVIRSQGGKETETEYFAALMTTMEAVESPESLAAVAYLLNLVLKRVPS
PVLMKKFSDTSKAFMDIMSAQASSGSTSALRWVLSCLAILLRKQDLEAWGYPITLQVYHG
LLSFTVHAKPKIRKAAQHGVCSVLKGSDFMFGENAPAHHPAAVSTAKFCIQEIEKSGGSK
EATTTLHMLTLLKDMLPCFPEGLVKSCSETLLRVMTLNHVLVTACAMQVFHNLFHAKPSS
STLSAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAHINLVRLHRDLGLGHLARFFGT
AVTCLLSPHSQVVAAATQTLKEILKECVAPHIADIGSVTSSASGPPQYIAKMFRAVEEGL
TYKFHAAWNSVLQLLGVFFEACGKQAHPVMKKCLQSLCDLRLSPHFPHTAALDQAVGAAV
TSMGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVRETRLGFFTTYFLPLATTLKRK
AMDLAQAGSTVESKIYDTLQWQIWTLLPGFCTRPTDVAASFKGLARTLGTAINERPDLRV
TVCQALRTLITKGCEAEADRAEVSRFAKNFLPILFNLYGQPVAAGEAAAPRRAVLETIKT
YLTITESQLVNGFLEKATEKVLDPASSDFTRLSVLDLVVALAPYSDEAAISKLYSTIRPY
LESKVHGVQKKAYRVLEEVCASSQGPAARFVQSHLDDLKKTLLDSLRSTSSPAKRPRLKC
LTHIVKKLSAEHEEFIAALIPEVILCTKEVSVGARKNAFTLLVEMGHAFLRFGSSQEEAL
QRYLVLIYPGLLGAVTTVSCSILALTHLLFEFKGLMGTSTVEQLLENVCLLLASRTRDVV
KSALGFIKVAVVVMDVVHLAKHVQLVMEAIGKLSDDMRRHFRMKLRNLFIKFIRKFGFEL
VKGLLPAEYHKVLINIRKAETRAKKHRALSQATTEEEEEEEEEEEPIQSKGDSIEEILAD
SEDEDEEEERGQGKEHRKLARQRSRAWLKEGGGDEPLNFLDPKVAHRVLATQPGPGRGKK
KDHGFKLSADGRLIIREEEDGDKVEEEGGTKGEDEEMTDVMEDASVRSKKKLKRQRDDEE
DELEIPPRYQAGGSGIHRPVAKKAAPGAEYKAKKAKGDVKRKGRLDPYAYIPLNRTKLNR
RKKVKLQGQFKGLVKAAQRGSQVGHKLRRKDRRP
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgctcggggaaattgccctccggtgtctcggccaagctgaagcgctggaagaaa
ggccacagcagcgacagcaaccccgccacttgccgccatcgccaggccgctcgcagccgc
ttcttcagccgcccgtcaggaaagagtgacctgacagttgatgctgtgaagttgcataat
gagctgcagtcggggaccctgagcctgggcaaaagccaagcccctgagacgaccatggac
caagacccggaggtggctttcactgagaagtcctcgggcacgtttctgagtggcttgtct
gactgtacaaacgtcaccttcagcaaagtgcagcgcttctgggaatccaactcagctgct
cacaaagagatctgtgctgtgctggctgctgttacagaggtgattcgatcccagggaggc
aaggagacggagactgagtactttgctgctctgatgacaacaatggaagcagtggagtcc
ccagagtcactggctgccgttgcgtacctactgaaccttgtcctgaagcgtgtgccaagt
cctgtgctcatgaagaagttctctgatacctccaaagcctttatggacatcatgtctgcc
caggcgagcagtggctccacctctgcactccgatgggtcctctcctgcctggccatcctt
cttcggaagcaagacctggaggcctggggctatcctatcacccttcaggtgtaccatgga
ctgctgagcttcaccgtgcatgccaagccaaagatccgtaaggctgctcagcacggagtg
tgctcagttctcaagggcagtgacttcatgtttggtgaaaacgcgcccgcccatcatcct
gctgctgtctccactgccaagttctgcatccaggagattgagaagtctggaggctccaaa
gaggccaccaccacactgcacatgctaacactgctgaaggacatgctgccctgcttcccg
gaaggcttggtgaagagctgcagtgagactctgcttcgggtcatgaccttgaaccacgtg
cttgtgacagcctgtgccatgcaggtcttccataacctcttccatgccaagcccagctcc
agcaccctgtcagcagaactcaacgcccagatcatcacggcattgtatgactacgttccc
agtgagaatgatttacagcccctgctggcctggcttaaggtcatggagaaagcccacatc
aacctggtcaggttgcatcgagacctggggctaggccatcttgctcgattttttggaact
gcagtaacctgtcttctctctcctcattcacaagtggtggcagctgctacccagactctc
aaggagatcctgaaggagtgtgtggctccacacattgctgacattggctctgtgacctct
tcagcctcaggtcctccccagtacattgctaagatgttcagggcagtggaagagggcctg
acatacaaatttcatgcggcctggaactctgtgctgcagctactgggtgtcttctttgaa
gcttgtggaaagcaggcccatcctgtgatgaagaagtgcctccagtccctgtgtgacctg
cgcctctcccctcacttcccccacacagcagccctagaccaggccgtgggggctgcagtg
accagcatgggacctgaggtggtgctgcaggccgtgccattggaaatcgacggctctgag
gagactctggatttcccacggagctggctgctgcctgtcatccgggatcatgttcgggaa
acacgacttggtttcttcaccacttacttcttgcccttggccaccactcttaaaagaaaa
gcaatggacctggctcaggcaggcagtacagtggagtcgaagatatatgatacactccag
tggcagatctggaccctcctgcctgggttctgtacaaggcccacagatgtggctgcctcc
ttcaaaggcctggcacggactctgggcacagctatcaatgaacgcccagacctgagggta
actgtgtgccaggccctgcgtacccttatcacgaagggctgtgaagcagaggctgaccgt
gctgaagtgagccgctttgccaaaaatttcctgccaatcctcttcaacctgtatgggcag
cctgttgcagctggagaggcagcagctcctcgccgtgctgtgctggaaaccatcaaaact
tacctcaccataactgagtctcagttggtgaatggcttcctggaaaaagccaccgagaag
gttctcgatcctgccagctctgattttaccagactgtctgtcctggacctggttgtggct
ttggctccttactcggatgaagctgccatcagtaagctatactctaccatccggccctac
ctggagagcaaggtccatggggtacagaagaaggcctatcgtgtgctggaggaggtgtgt
gccagttctcaaggccctgcggcccgtttcgtgcagagccacctggacgatctgaaaaag
actctgctggactcactccggagcacttcctcgcctgctaaaaggccccgtctgaagtgc
ctcacacacattgtgaaaaagctgtcagctgagcatgaggagttcatcgctgccctcatc
ccagaggtgatcctgtgcaccaaggaggtgtcagtgggtgcaaggaagaatgcgttcacc
ctgctggtggagatgggccacgctttcctgcgatttggctccagccaggaagaggctctg
cagcgatacttggtcctgatctaccctggccttctgggtgcggttaccacagtcagttgc
agcattttggctctgacccacctcttgtttgagttcaaagggctgatggggacaagcaca
gtggagcagctcctggagaacgtgtgcctgctgctggcctctcgaacccgtgatgtggtc
aaatctgcactaggcttcatcaaggtggctgtggtggtcatggacgtggtgcaccttgct
aagcatgtgcagttagtgatggaagccatcgggaagttgtcagatgacatgcgacgacac
ttccgcatgaagcttcggaacctgttcatcaagttcatccgcaagtttggattcgagttg
gtgaagggtctgctacctgcagaataccacaaagtcctgataaacatcagaaaagctgaa
acccgagccaagaagcatcgtgccctgagccaggctactacagaggaggaggaagaggag
gaagaggaagaagagcccatccagagcaaaggtgacagcattgaggagattttggctgac
tctgaagatgaagatgaagaagaagaaagaggccagggcaaggagcatcggaagttggca
cgacagaggagccgagcatggctgaaggaaggcggtggtgatgagcccctcaacttcctg
gatcccaaggtggcccatcgagtccttgccacccagcctgggcccgggcggggcaagaaa
aaggatcatggcttcaagttgagcgctgatggccggctgatcatacgggaggaggaagat
ggagacaaggtggaggaagaaggtggcactaaaggggaagatgaagagatgaccgatgtg
atggaagatgccagtgtcagaagtaaaaagaaacttaagcggcagagggacgatgaggag
gatgagctggagatcccacctcggtaccaagctggaggctctggcatccatcgccctgtg
gctaagaaggctgcacctggagctgaatacaaggccaagaaggcaaagggtgatgtgaag
aggaagggccgcctggacccctatgcttacatcccactcaacagaaccaagctcaaccgc
aggaaaaaggtgaagctacagggacagtttaaaggtttggtgaaagctgcccagcgggga
tcccaggtggggcacaaactccgcagaaaggatcgtcggccctga
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