Arvicanthis niloticus (African grass rat): 117695456
Help
Entry
117695456 CDS
T08817
Name
(RefSeq) medium-wave-sensitive opsin 1
KO
K04251
long/medium wavelength-sensitive opsin
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
anu04030
]
117695456
G protein-coupled receptors [BR:
anu04030
]
Rhodopsin family
Vision
Opsin
117695456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srt
7TM_GPCR_Srsx
DUF3810
Motif
Other DBs
NCBI-GeneID:
117695456
NCBI-ProteinID:
XP_034342235
LinkDB
All DBs
Position
X:128798753..128818309
Genome browser
AA seq
359 aa
AA seq
DB search
MAQRLTGEQASDHYEDSTHSSIFTYSNSNSTRGPFEGPNYHIAPRWVYHLATAWMILVVV
ASVFTNGLVLAATMRFKKLRHPLNWILVNLAVADLAETIIASTISVVNQIYGYFVLGHPL
CVIEGYIVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLATVGIVFSWVWAAVWTA
PPIFGWSRYWPYGLKTSCGPDVFSGTSYPGVQSYMMVLMVTCCIFPLSIIVLCYLQVWLA
IRAVAKQQKESESTQKAEKEVTRMVVVMVFAYCICWGPYTFFACFATAHPGYAFHPLVAS
VPSYFAKSATIYNPIIYVFMNRQFRNCILQLFGKKVDDSSELSSTSKTEVSSVSSVSPA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaaggcttacaggtgaacaggcatcggaccactatgaggacagcacccattca
agcatcttcacctattccaacagcaacagcaccagaggtccctttgaaggtcccaattat
cacattgctcccaggtgggtgtaccacctcgccaccgcctggatgattcttgttgtcgtt
gcatctgtcttcactaatggacttgtgctggcagccaccatgagatttaagaagcttcgc
catcctctgaactggattctggtgaacttggcagttgctgacctagcagagactattatt
gccagcactatcagtgttgtgaaccaaatctatggctacttcgtgctgggccaccctctg
tgtgtcatagaaggctacattgtctcattgtgtgggatcacaggcctctggtccctggcc
ataatttcctgggagagatggctggtggtctgcaagccctttggcaatgtgagatttgat
gctaagctggccactgtgggaatcgtcttctcctgggtctgggctgctgtgtggacagcc
ccaccaatctttggttggagcaggtactggccttacggcctgaagacatcctgtggccca
gacgtgttcagcggtacctcgtaccccggggttcagtcttatatgatggtcctcatggtc
acgtgctgcatcttcccactcagcatcatcgtgctctgctacctccaagtgtggctggcc
atccgagcagtggcaaagcaacaaaaagaatctgagtccacccagaaggcagagaaggag
gtgacacgcatggtggtggtgatggtcttcgcatactgcatctgctgggggccctatact
ttctttgcatgctttgctactgcccaccctggctatgccttccaccctcttgtggcctcc
gtaccatcctactttgccaaaagtgccactatctacaaccctattatctatgtctttatg
aaccggcagtttcgaaactgcatcttacagctctttggaaagaaggttgatgatagctct
gaactttccagcacctccaagacagaagtctcatctgtctcttcagtgtcacctgcataa
DBGET
integrated database retrieval system
