Arvicanthis niloticus (African grass rat): 117696154
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Entry
117696154 CDS
T08817
Symbol
Rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117696154 (Rbbp6)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117696154 (Rbbp6)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
U-box type E3
117696154 (Rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
117696154
NCBI-ProteinID:
XP_034342680
LinkDB
All DBs
Position
1:90282537..90314417
Genome browser
AA seq
1787 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADSDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTTKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKTLVGPPPPSYTCFRCGKPGHYIKNCPTNGD
KNFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFL
PEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTC
HQNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPIPAPRPLIQRNLQPLMR
SPISRQQDPLMIPVTSSSAHPTPSISSLTSNPSSLAPSVPGNPSSAPAPVPDITATVSIS
VHSEKSDGPFRDSDNKLLPAAALASEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSL
LHGQLIPTTGPVRINAARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHS
ERSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSV
PPPGFPPAPANISTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLD
EFTNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSF
SRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQ
SPTKRNVPQGETEREYFNRYREVPPPYDIKAYYGRSVDFRDPFEKERYREWERKYREWYE
KYYKGYAVGAQPRPSANREDFSPERLLPLNIRNSPFTRGRREDYAAGQSHRNRNLGGNYP
EKLSTRDSHNPKDNPKSKEKESETVPGDGKGNKHKKHRKRRKGEESESFLNPELLETSRK
PRESSGIDETKADTLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKREKDKPKVKSDKT
KRKSDGSATAKKDNVLKPSKGAQEKVDGDREKSPRSEPPLKKAKEEATKIDSVKPSSSQK
DEKVTGTPRKAHSKSAKEHQDTKPVKEEKVKKDCSKDIKSEKPASKDEKAKKPEKNKLLD
SKGEKRKRKTEEKSVDKDFESSVKISKVEGAEIVKPSPKRKMEGDVEKLERTPEKDKIAS
STTPAKKIKLNRETGKKIGNAENTSTTKEPSEKLESSSSKIKQEKVKGKAKRKVAGTEGS
SSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSKW
DKDDFESEEEDVKATQPIQSVGKPSSIIKNVTTKPSATVKYTEKESEQSEKIQKLTKEVS
HELMQHELRGSKGSASSEKGRAKDRDHSGSEKDNPDKRKSNAQPDKESTVDRLSEQGHFK
NLSQSSKETRTSEKHESVRGSSNKDFTPGRDKKMDYDSRDYSSSKRRDERSELARRKDSP
PRSKDSLSGQKSKLREERDLPKKGAELKKSNSSPPRDKKPHDHKASYETKRPCEETKSVD
KNSGKEREKHVAEARNGKESSISKLPYIPNAPDPPIEKEPVPGQIEKNTIKPKPQSSHSS
RLSSDLTRETDEAAFEPDYNESDSESNVSVKEDAVASISKDLKEKTTEKAKESLNVTAAS
QPAADRSQSQSSPSVSPSRSHSPSGSQTRSHSSSASSAGSQDSKKKKKKKDKKKHKKHKK
HKKHKKHAGADGEVEKSQKHKHKKKKAKKNKDKEKEKDDQKVKSVTV
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcactataaattttcctctaaactcaactacgacaccgtcacctttgat
gggctccatatctccctctgcgacttaaagaagcagattatggggagagaaaagctgaaa
gctgccgatagcgatctgcagatcaccaacgcacagacgaaagaagaatatactgatgat
aatgcactaattcctaaaaattcatctgtaattgtcagaagaattcctattggaggtgtt
aagtctacaagcaagacatatgttataagtcgaactgaaccagtgatgggaactacaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaggaagacaaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccaatcaattacatgaagaaaactctagtaggtccgccacctccatcctat
acctgctttcgttgtggtaaacctggtcattatattaagaattgcccaacaaatggggat
aagaactttgaatctggtcctaggatcaaaaagagcactggaattcctagaagttttatg
atggaagtgaaagatcctaacatgaaaggtgcaatgcttacgaacactggaaaatatgca
ataccaactatagatgcagaggcctatgcaattgggaagaaagagaaaccacccttctta
ccagaggaaccatcatcatcttcagaagaagatgatcctatcccagacgagctcttgtgc
ctcatctgcaaagacattatgactgatgccgttgtcattccctgctgtggaaacagttac
tgtgatgaatgtataagaacagcactcctggagtcagatgaacatacatgtccaacatgt
catcagaatgatgtttctcctgatgctttaattgccaacaagtttttacgacaggctgtt
aataactttaaaaatgaaactggctatacaaaaagactacgaaaacagttacctccaccc
ccacccccaataccagcaccaagaccactcattcagcggaacctgcagcctctgatgaga
tctcccatatcaagacagcaggatcctctgatgattccagtgacatcttcctcagctcac
ccaactccatctatatcttcattaacttcaaatccatcttctttggccccttctgtgcct
ggaaatccatcttctgccccagctccagtacctgatataactgcaacagtatctatatca
gtccattcagaaaaatcagatggaccctttcgggattctgataataaattattaccagct
gccgcccttgcatcggaacattcaaagggagcctcatcaattgctattactgctcttatg
gaagaaaagggttaccaggtgccagtccttggaactccatctttattgggacagtcatta
ttacatggacagttgatccctacaactggtccagtaagaataaatgctgctcgtccaggt
ggtggccgaccaggttgggaacattccaacaagcttgggtacctagtttctccaccacag
caaattagaagaggagaaagaagctgttacagaagtataaaccgtgggcgacaccacagc
gaacgatcacagaggactcaaggcccatcactaccagcaactccagtctttgtgcctgtt
ccaccacctcctttgtatccgcctcctccccatacacttcctcttcctccaggtgtacct
cccccacagttttctcctcagtttcctcctggccagcctccaccagcaggatatagtgtc
cctcctccagggtttccaccagctcctgccaatatatcaacaccttgggtatcgtcagga
gtgcagactgcccattcaaataccatccctacaacacaagcacctcctttgtccagggaa
gagttctatagagagcaacgacgactaaaggaagaggaaaagaaaaagtccaagctagat
gagtttacaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgt
aggcgctcattttccaggtctaaatctccctatagtgggtcatcgtattcaagaagttca
tacacttactcaaagtcaaggtctggctcaacacgttcacgctcttactctcggtccttc
agccgctcacactctcgctcctattcacgatcgcccccataccccaggagaggcagaggc
aagagccgcaattaccgttcacggtccaggtctcatggataccaccgatctaggtcaagg
tcacctccctatagacgataccactcacggtcgagatctcctcaagcatttaggggacag
tctcccactaaacgcaatgtacctcaaggagaaacagagcgtgagtattttaatagatac
cgagaagttccacccccttatgacatcaaagcctattatgggcggagtgtcgactttaga
gacccatttgagaaagaacgctaccgggaatgggagaggaaataccgagagtggtatgag
aagtactacaaagggtacgcagtgggagcgcagcctagaccctcggccaacagagaagac
ttttctccagagagactcttaccccttaatatcagaaattcacccttcacaagaggacgc
agagaagactacgctgctggacaaagtcatagaaatagaaatctaggtggcaactatcca
gaaaagctttcaacaagagacagtcacaatccaaaagataatccaaaatcgaaagagaag
gagagtgagactgttccaggagatggcaaaggaaacaagcataagaagcacaggaaacga
agaaagggggaagagagtgagagcttcctgaacccagagctactggagacttctaggaaa
cccagggaatcatcagggattgatgagactaaggcagatacactgttcgttctcccgagc
agagacgatgctacacctgttagggatgagccaatggatgcagaatcgatcactttcaag
tcagtgtctgaaaaagacaagagagaaaaggataagccaaaagtaaaaagtgacaagacc
aaacggaaaagtgacgggtctgctacagccaagaaagacaatgttttaaaaccttctaaa
ggagcccaagaaaaggtagacggagaccgtgaaaaatctccccggtctgaacctccactc
aaaaaagccaaagaggaggctacaaagattgactcagtaaaaccttcctcatctcagaaa
gatgagaaggtcactggaacccctaggaaagcccactctaaatctgcaaaagaacaccag
gacaccaagccagtcaaggaggagaaggtgaaaaaggactgttccaaagacatcaagtca
gaaaagccagccagtaaggacgagaaggccaagaagcctgagaaaaataaactacttgat
agcaagggagagaaacggaagagaaaaactgaagaaaagagtgtagataaagattttgag
tcttcagtgaaaatctctaaagtagaaggagcagaaatagtgaaaccatcaccaaagcgg
aaaatggaaggtgatgttgaaaagctggaaaggaccccagaaaaagacaagattgcatca
tcaactaccccagctaaaaaaatcaaactcaacagagaaactggaaaaaaaattggaaat
gcagaaaacacatctactacaaaagaaccctctgaaaaattggagtcatcatctagcaaa
atcaaacaggaaaaagtcaagggaaaggccaaacgaaaagtagctgggactgaaggctcc
agctccacgcttgtggactataccagtacaagctcaactggaggcagtcctgtgagaaaa
tctgaagaaaagacagatacaaagagaacagtcattaaaactatggaggaatataataat
gataatacagctcctgctgaagatgttataattatgattcaggttcctcagtccaaatgg
gataaagatgactttgaatctgaagaagaagatgttaaagccacacagcctatacagagt
gtagggaaaccatctagtattataaaaaatgttactactaagccatcagctacagttaag
tacactgagaaagaaagtgagcagtctgagaaaattcagaagcttaccaaggaggtgagc
catgagctgatgcagcatgagctcaggggctcaaagggctctgcgtccagtgagaagggg
agagccaaagaccgggatcactcagggtcagagaaggacaaccctgacaagaggaagagc
aatgcccagccagacaaggagagcactgtggaccgcctgagtgaacaaggacattttaag
aatctctctcaatcttccaaagagaccaggacttcagagaagcatgagtctgttcgtggt
tcctcaaataaagacttcactcctggtagagacaagaaaatggactatgacagcagagat
tattccagttccaaacgaagagacgagagaagtgaattagcaagaagaaaagactctcct
cctcggagtaaagattctttatctggacagaaaagtaagctgagggaggagagagattta
cctaaaaagggggcagagttgaaaaaaagtaattctagccccccaagagacaaaaagcct
catgatcataaagcctcctacgaaactaaacgcccatgtgaagagacaaagtctgtagat
aaaaactctgggaaggaacgggagaagcatgttgctgaagctagaaacgggaaagagtcc
agtatcagcaaattgccatatatacctaatgcaccagaccctcccattgagaaggagccg
gttcctgggcagattgagaagaacaccatcaagccaaaaccccagtcaagtcattcctct
aggctttcctctgatctaactagagagactgatgaggctgcctttgaaccagactataac
gagagtgacagtgagagtaatgtgtctgtgaaggaagacgctgttgccagtatctccaag
gacttgaaagagaaaacaacagagaaagcaaaagagagcttgaatgtaacagcagccagc
cagccagctgcagacaggagccagagccaaagtagccccagtgttagtccaagtagaagt
catagcccttctggtagccagacccgaagccacagcagcagtgccagctcagcaggaagc
caagacagcaaaaagaagaagaaaaagaaagacaaaaaaaagcacaagaagcataaaaag
cacaagaagcataagaagcacgcaggcgcggatggcgaggtggagaagagccagaaacac
aaacacaagaagaagaaggcgaaaaagaacaaagataaggagaaggagaaagatgaccaa
aaagtgaaatctgtcactgtgtga
DBGET
integrated database retrieval system
