KEGG   Arvicanthis niloticus (African grass rat): 117696157
Entry
117696157         CDS       T08817                                 
Symbol
Wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
anu  Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:anu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:anu03009]
    117696157 (Wdr18)
Ribosome biogenesis [BR:anu03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    117696157 (Wdr18)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WDR18_C Beta-prop_WDR3_2nd WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C WDR55 WD40_Gbeta WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_WDR41 ANAPC4_WD40 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_ACSF4 Beta-prop_Nup120_160 WDR90_beta-prop_4th WDR54 Beta-prop_IP5PC_F Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 117696157
NCBI-ProteinID: XP_034342682
LinkDB
Position
Unknown
AA seq 431 aa
MAAPMEVVVCTDSAAQLWSCVVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQQGKN
YICAWELQRKDQLQQKIICPGPVTCLTTAPNGLYVLAGIAESIYLWEVSTGNLLVILSRH
YQDVSCLKFTGDGSHFVSTGKDCLVLAWSVCSVLQADPSRILAPRHVWSQHTLPVTDLHC
GFGGPMARVATASLDQTVKLWAISSGDLLLSVLFDMGIMSVTMDLAEHHIFCGGNDGSIF
QVDLCSWPGLREHSFQPEQNTGKIFKGHRNQVTCLSVSADGSLLLSGSHDESVRLWDVKS
KQCLRTVSLKGPVTNAAIMLAPPSMLNPEFRPSLPLPHFNKHLLGAEHGDEAQGGGLRLQ
LGLHLQGKEPSYLERLEQLQAVLSGYLEKNMLGSQMLPARVFELEEEVRSLRKINRDLFD
FSTRIITRPSK
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggcggcgcccatggaagtggtggtgtgtacagactccgcggcacagctatggagctgc
gtagtatgggagcttcattcgggcgccaacctgctcacctatcgaggcggccaagcgggg
ccgcgaggcctagcgctactcaatggcgagtacctgctagcagcgcagcagggcaagaac
tacatctgtgcttgggagctgcagcgcaaggaccagctccaacagaaaatcatttgtcct
gggcctgtcacctgtctgactacagcacctaacggcttgtatgtcctggcaggaattgca
gagagcatctacctgtgggaggtctccacagggaatctcctggtcatcctcagccgtcac
taccaggatgtgtcatgcctgaagtttacaggtgatggcagccattttgtctccacgggc
aaggactgcctggtgctggcctggagcgtctgcagtgtgctacaggcagacccatccagg
atccttgccccgagacatgtctggtcccagcacacgctcccagtcacagaccttcactgc
ggctttgggggccccatggcccgggtggccactgcttcactggaccagactgtgaagctc
tgggccatctcctcgggagacctgctgctgtctgtgttgtttgacatgggcatcatgtct
gtgaccatggacctggctgagcaccacatattctgtggaggcaacgatggctccatcttc
caggtggacctgtgcagctggcccggactgagggagcacagcttccagcccgagcagaac
acagggaaaatcttcaaaggacacaggaaccaggtaacatgcctgtcagtgtcagcagac
ggcagccttctgctctcaggctcccatgatgagtccgtgcggctgtgggacgtgaagagc
aagcagtgcttgcgcacagtctccctcaaaggcccagtgaccaatgcagcaatcatgcta
gccccacccagcatgctgaacccggaattcaggcccagcctgcccctgccccacttcaac
aagcacctgctgggtgctgagcatggagatgaagcccagggtgggggcctacgcctgcag
cttgggctccacctgcagggcaaagagcctagctacctggagcgtctggagcagctgcag
gcagtgttgtccggctatctggagaagaacatgctaggcagccagatgctgcctgctcgt
gtgtttgagctggaagaggaggtgcgtagcctgcgcaagatcaaccgggacctgttcgac
ttctccacgcgcatcatcacacggccctctaagtga

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