Arvicanthis niloticus (African grass rat): 117696243
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Entry
117696243 CDS
T08817
Symbol
Cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117696243 (Cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117696243 (Cnot2)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117696243 (Cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117696243 (Cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
117696243
NCBI-ProteinID:
XP_034342816
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MRTVRKGHDSMVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDGDYHDENMYYSQSSMF
PHRSEKDMLASPSTSGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHV
TPTTGVPTMSLHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSS
PSIICMPKQQPSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDF
PALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKD
PTSSNDDSKSNLSTSGKTTSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGM
VTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRP
QDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWR
YHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPST
FNYNPAQQAF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgtgaggaaaggacacgactctatggtgaggactgatggacatacattatct
gagaaaagaaactaccaggtgacaaacagcatgtttggtgcttcaagaaagaagtttgta
gagggggtggacggcgactaccacgatgagaacatgtactacagccagtcttctatgttc
ccacaccggtcagagaaagatatgctggcatcaccatctacatcaggtcagctgtctcaa
tttggggcaagtttatacgggcaacaaagtgcactaggccttccaatgagggggatgagc
aacaatacccctcagttaaatcgcagcttatcccaaggcactcagttaccgagccacgtc
acgccaacaacaggggtaccaacaatgtcacttcacacgcctccgtctccaagcaggggt
attttgcctatgaatcctaggaatatgatgaaccactcccaggttggtcagggcattgga
attcctagcagaacaaatagcatgagcagttcagggttaggtagccccaacagaagctcg
ccaagcataatctgtatgccaaagcagcagccttctcgacagccttttactgtgaacagt
atgtctggatttggaatgaacaggaatcaggcatttggaatgaataactccttgtcaagt
aacatttttaatggaacagatggcagtgaaaatgtgacaggattggacctttcagatttc
ccagcattagcagaccgaaatagaagggaaggaagtggcaacccaactccattaataaac
cccttggctggaagagcgccttacgttggaatggtaacaaaacctgcaaatgagcaatct
caagacttctcaatacacaatgaagactttccagcattacctggctccagctataaagat
ccaacgtcaagtaatgacgacagcaaatctaatttgagtacatcggggaagacgacttca
agtacagatggacctaaattccctggagataaaagttcaacaacacaaaacaataatcag
cagaaaaaggggatccaggtgttacctgatggtcgagttactaacattcctcaagggatg
gtgacggaccaatttggaatgattggcctgttaacatttatcagggcagcagagacagac
ccaggaatggtacatcttgctttaggaagtgacttaacaacattaggcctcaatctgaac
tcacctgaaaatctctaccccaaatttgcatcaccctgggcttcttcaccttgtcgacct
caagacatagacttccatgttccatcagagtatttaacaaacattcacattagggataag
ctggctgcaatcaagcttggccgatacggagaagacctcctcttctatctgtattacatg
aacggcggggatgtattacaactcttagctgcagtagagctttttaaccgtgattggaga
taccacaaggaggagcgggtatggattactagggcaccaggcatggagccaacgatgaaa
accaacacgtatgagcggggaacctactacttctttgactgtctcaactggaggaaagta
gctaaggagttccatctggaatatgacaaattagaagagcggcctcacctgccgtccacc
ttcaactacaaccctgctcagcaagccttctaa
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