Arvicanthis niloticus (African grass rat): 117696357
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Entry
117696357 CDS
T08817
Symbol
Shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00260
Glycine, serine and threonine metabolism
anu00630
Glyoxylate and dicarboxylate metabolism
anu00670
One carbon pool by folate
anu01100
Metabolic pathways
anu01200
Carbon metabolism
anu01230
Biosynthesis of amino acids
anu01240
Biosynthesis of cofactors
anu01523
Antifolate resistance
anu04981
Folate transport and metabolism
Module
anu_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
117696357 (Shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
117696357 (Shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
117696357 (Shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
117696357 (Shmt2)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
117696357 (Shmt2)
Enzymes [BR:
anu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
117696357 (Shmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
117696357
NCBI-ProteinID:
XP_034343087
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MVPFSLLRTTRPLQRCGQLVCMAARAQHSKVAQTQAGEAAGSWTGQESLSDSDPEMWELL
QREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQ
RRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDV
KRISATSIFFESMPYKLNPQTGLIDYDQLALTARLFRPRLIIAGTSAYARLIDYARMREV
CDEVRAHLLADMAHISGLVAAKVIPSPFKYADVVTTTTHKTLRGARSGLIFYRKGVRTVD
PKTGQEIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLRNAQA
MADALLKRGYSLVSGGTDTHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAIT
PGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKHKTAKLQDFKSFLLKDPETSQ
RLANLRQQVEQFARGFPMPGFDER
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtacccttctctttgcttcggaccactcggcctctgcagagatgtggtcagctggtc
tgcatggctgcccgggcccagcacagcaaggtggcccagacacaggctggggaagcagct
ggaagctggacgggccaggagagtttatcagacagtgaccctgagatgtgggagcttctg
cagagggagaaggacagacagtgtcgtggtctggaactcattgcttcagagaacttctgc
agccgagctgcgttggaggccctggggtcctgtctcaacaacaagtactcggagggttac
cctggcaagagatattatgggggagcagaagtcgtggacgagatcgagctgctctgtcag
cgccgggccttggaagcctttgacctggatcccgcacaatggggagtcaatgtgcaacct
tactcagggtctccagccaatctggctgcctacaccgccctcctgcagcctcatgatcga
atcatggggttggacctgcccgacgggggccatctcacccacggctatatgtctgacgtc
aagcggatctccgccacttccatctttttcgagtctatgccgtataaactcaatccccaa
actggcctcatcgactacgaccagctggcgctgactgctcggctttttcgaccacggctc
atcatagctggcacaagtgcctatgcccgtctcattgactatgcacgcatgagagaggtc
tgtgatgaggtcagggcacacctgctggcagacatggcccatatcagtggcctggtggcc
gccaaggtgatcccctcacctttcaagtacgcggacgttgtcaccaccaccactcacaag
acgcttcgaggggccaggtcaggactcatcttttaccggaagggagtgcggaccgtagac
cccaagactggccaggagatcccttatacttttgaggatcgaatcaactttgctgtgttc
ccatctctgcagggggggccccacaaccatgccattgctgccgtagccgtggccctcaag
caggcctgcacccctatgttccgggagtactccttacaagtgttgaggaacgcccaggcc
atggccgacgccttgctcaagcgaggatactcactggtgtctggtggtactgacacccac
ctggtgctggtggacctgcgacccaaaggcctggatggagcaagagcagagcgtgtactg
gagcttgtgtccatcacagccaacaagaacacctgtcccggagaccggagtgccatcact
ccaggaggcttgaggcttggagccccagcattgacttcccgacagttccgtgaggatgac
ttccggagagttgttgattttatcgatgaaggcgtcaacatcggcttagaggtgaagcac
aagactgccaagctccaggatttcaaatccttcctgctcaaggacccagaaacaagtcag
cgtttggccaacctccggcaacaggtggaacagtttgccaggggcttcccgatgcctgga
tttgatgaacgctga
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