Arvicanthis niloticus (African grass rat): 117696394
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Entry
117696394 CDS
T08817
Symbol
Pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03030
DNA replication
anu03410
Base excision repair
anu03420
Nucleotide excision repair
anu03430
Mismatch repair
anu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117696394 (Pold1)
03410 Base excision repair
117696394 (Pold1)
03420 Nucleotide excision repair
117696394 (Pold1)
03430 Mismatch repair
117696394 (Pold1)
03440 Homologous recombination
117696394 (Pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anu03032
]
117696394 (Pold1)
03400 DNA repair and recombination proteins [BR:
anu03400
]
117696394 (Pold1)
Enzymes [BR:
anu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117696394 (Pold1)
DNA replication proteins [BR:
anu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
117696394 (Pold1)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
117696394 (Pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
117696394 (Pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
117696394
NCBI-ProteinID:
XP_034343140
EnsemblRapid:
ENSANLG00005003054
LinkDB
All DBs
Position
1:complement(18219112..18235059)
Genome browser
AA seq
1105 aa
AA seq
DB search
MDCKRRQGPGSGVPPKRARGGLWDEDEPPPSQFEENLALLEEIEAETRLQEAEEELQLPP
EGTVGGQFSTADIDPRWLRPALRALDPSTEPLIFQQLEIDHYVGSAPPLPEGPPPSRNSV
PILRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGAEHLSELQQELNTAISRDQRGGKEL
SGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFA
PYEANVDFEIRFMVDADIVGCNWLELPAGKYVQRREKKATLCQLEVDVLWSDVISHPPEG
QWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAP
ILGAKVQSYEREEDLLQAWATFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLG
RVTGLRSNIRDSSFQSRQVGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFL
GEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVP
LGYLLTRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGEDYTGATVIEPLKGYYDVPIATLD
FSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKADEFIKTPTGNEFVKSSVRKGLLPQILEN
LLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTG
FGRQMIEKTKQLVESKYTLENGYDANAKVVYGDTDSVMCRFGVSSVAEAMALGREAANWV
SSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRSDAHDRMDCKGLEAVRRDNCPLVAN
LVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVE
LAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQL
AKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNCCIGCRSVIDHQ
GAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMR
KKVRKDLEDQERLLQRFGPPGPEAW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggattgtaagcggcgacaaggaccgggctctggggtgcccccaaagcgggctcgcggg
ggcctctgggatgaggacgagccaccgccatcgcagtttgaggagaacctggcgctgctg
gaggagatcgaggctgagactaggctgcaggaggcagaggaagagctgcagctgccccca
gagggcactgtgggtgggcagttttccactgcagacattgacccacggtggctgcggccc
gccttgcgtgccttggaccccagtacggagcccctgatcttccagcagctagagattgac
cactatgtgggctcagcaccacccctgccagaagggcccccgccatcccgtaactcagtg
cctatactgagggcctttggggtcaccgatgagggcttctccgtctgctgccacatccat
ggttttgccccctacttctacacccctgcacctccgggttttggggctgagcacctgagt
gagctacagcaggaactgaacacagccatcagccgagaccagcgcggtgggaaggagctc
tcagggccagctgtgctggctatagagctatgctcccgtgagagcatgtttgggtaccat
ggtcatggcccttctccatttctccgcatcaccctggcactaccccgccttatggcacca
gcccgccgcctcctggaacagggtgtccgagtgccaggcctgggcaccccgagcttcgca
ccctatgaagccaatgtggactttgagatccggttcatggtggatgctgacatcgtggga
tgcaactggttggagctcccagctggaaagtacgtccagaggagagaaaagaaggctaca
ctgtgtcagctggaggtggatgttctgtggtcagatgtcatcagtcacccaccagaaggg
cagtggcagcgcattgcacctcttcgcgtgctcagctttgacatcgaatgtgctggccga
aaagggatcttccctgagcctgagcgtgaccctgtgatccagatctgttctctggggctg
cgttggggcgagccagagccattcttgcgcctggcactcacgctgcggccctgtgccccc
atcctgggtgccaaagtacagagctatgaacgggaagaagacctgctccaggcctgggcc
acctttatccttgccatggaccctgatgtgatcaccggctacaacattcagaactttgac
ctcccatacctcatctctcgggcacaaaccttgaaggtggaccgcttccctttcttgggc
cgtgtgactggtctccgctccaacatccgtgactcctccttccaatcaaggcaggttggc
cggcgggacagtaaagtggtcagcatggtgggtcgcgttcagatggatatgctgcaggtg
ctgcttcgggaatacaagctccgctcgtacacgctcaacgctgtcagcttccacttcctg
ggtgagcagaaggaggatgttcagcacagcatcatcaccgacctgcagaatgggaacgag
cagacacgccgccggctggccgtgtactgcctgaaggatgcctttctgccacttcgactc
ctcgagcgccttatggtgctggtgaacaacgtggagatggctcgtgtcacgggcgtaccc
cttgggtacctgctcacccgaggccagcaggtcaaggttgtgtctcagctgcttcgccag
gccatgcgccaggggctgctgatgcccgtggtgaagaccgagggaggtgaggactacacg
ggggctactgtcattgagcccctcaaagggtactatgatgtccccatcgccaccctggac
ttctcctccctgtacccatccatcatgatggcccataacctgtgctacaccacactgctc
cggcctggggctgcccagaagttgggccttaaagcagatgagttcatcaaaacacccact
gggaatgaatttgtgaagtcgtctgtacggaagggcctcctgccccagatcctggagaat
ctgctgagtgcccggaagagggccaaggctgagctggctcaggagacagaccccctgcgg
cgacaggtcttggatggacggcagctggcactaaaagtgagtgccaactctgtgtatggc
ttcactggtgcgcaggtgggcaagctgccatgtctggagatctcccagagtgtcactggg
ttcgggcggcagatgattgagaaaaccaagcagctagtggagtccaagtacaccctggaa
aatggctacgatgccaacgccaaggtggtctacggtgacactgactctgtgatgtgccga
tttggtgtctcctctgtggctgaggcaatggctctggggcgggaggctgcaaactgggta
tccagtcacttcccatcgcccatccggctggagtttgagaaggtttactttccgtacctg
ctcatcagcaagaagcgttatgctggtctgctcttctcctcccgctctgatgcccatgac
agaatggactgcaagggcctggaggctgtgcgcagggacaactgtcccctggtggccaac
cttgttacatcctctctgcgccgaattctcgtggatcgggatcctgatggtgcagtagcc
catgctaaggacgtcatctcggacctgctgtgcaaccgcatagacatctcccaactggtc
atcaccaaagagctgacccgtgccgcagcagactacgctggcaagcaggctcatgtggag
ctggcagagaggatgaggaagcgtgaccccggcagcgcgcccagcctgggtgaccgagtc
ccctatgtgatcattggtgctgccaagggtgtggccgcctacatgaagtcggaggacccc
ctgtttgtgctggagcacagcctgcccatcgatactcagtactacctggagcagcagctg
gccaagccgctgttgcgcatctttgagcccattctgggtgagggccgcgcagagtctgtg
ctgctgcgcggtgaccacacacgctgcaaaaccgtgctcaccagcaaggtgggcggcctc
ctggccttcaccaagcgccgcaactgttgcattggctgccgctccgtgatcgaccatcaa
ggagccgtgtgtaagttctgtcagccacgggagtcggagctctatcaaaaggaggtgtca
cacctgaatgctctggaggaacgtttctcgcgcctctggacacagtgccagcgctgccag
ggcagcttgcatgaggacgtcatctgtaccagtcgcgactgccccatcttctacatgcgc
aagaaggtgcgcaaggacctagaagaccaggagcggctgctgcagcgcttcggacctccc
ggccctgaggcctggtga
DBGET
integrated database retrieval system
