Arvicanthis niloticus (African grass rat): 117696435
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Entry
117696435 CDS
T08817
Symbol
Cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54 isoform X1
KO
K25553
cilia- and flagella-associated protein 54
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
anu03037
]
117696435 (Cfap54)
Cilium and associated proteins [BR:
anu03037
]
Motile cilia and associated proteins
Sperm associated proteins
117696435 (Cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
DUF7050
Motif
Other DBs
NCBI-GeneID:
117696435
NCBI-ProteinID:
XP_034343208
LinkDB
All DBs
Position
Unknown
AA seq
3170 aa
AA seq
DB search
MASSSSSSSSSDVSPDSETSVSPVQLPPTPPPTSTAVLKSPTESKSSSTNPAQWTCSEDS
LPSAAFYGPLDSKNPLLASCEKEIRELLGFMKKNKALTTSEEQKHEFHRRCATTLFNIWT
KYAPRLPTDYYNEKLLKVGDSLCQIKEYKLALLQCYGRYLQEFITDFDEQKEDVNHFKTV
FFPKGFGDETARLTFHALSGKNICNYQLVCESDANLKNEESVRQCLHILSSFRLIMQVAL
PQEHLCWIVFNGTLYIYTICRKLMIIGQSSKALEFLLWASMCMESSVPLLSVRYLSWRAT
LYTAVCQCHYDCQAGIHGEAFARRALAKIDELRQLELMSSSASMETSRKYYREATIKMAV
MIFKRGVFESRRKNKNVFRPKIRLNLKEAQSLPWPRTVTERLLDELLDSTSSRFLAVLEA
LSDSNRRILQTGPLVTDEMELRDVVSELFMAGKELLILSNVGSSGKLDFPQTSLQENVVE
RKNIISVDASVKFAKLAFTYEEWGLFESLAGQLIQFLQKQASPESKKAKKDLILLLAVEP
LINVKKTRGLIFPLDTDKETQSVQSYLKHIASHESCVRTTFTEDIFSLAAILHFCVCNPT
KGVQPDKDIVVDVIALLWQRCKLGIQRLNIPKNDFAKYTHKISTNKWVYLLWQISEVMHC
YKLEDLDIVMVAEITLRLSEILESLGNPKRKFKKSADLSTKKGPDEVSGTSKGVLEILPI
LKRTPVEQLFYAYELLDKSITGMNWNCMLTTLSDGSSVIDHCYVKDSHDVDGDTYKPISS
NSYMMDLHLELIQAQHRIAVVLLDQLEVLQTPAVSTNTSAKGWEKLKKPRNTECFSELTV
MKKIKKNKLSKAVYLMQKALLLFEKDTVCETSWNLLMEACALIEKVEAEQNALYSYQKYL
ESSKIKKTRIPPPPILLARTHCSVTLKPAPFISDVKASWYCILGCKAEGSYGKVRLNNNH
LPNSGEAIPADGRSFFEIKGLETNANYIFAIAAYSSIGKLIGDAIGETTKPILIYPTLSA
VTARMYLTQVAYQIGNYEMAKKVFSPVWDYFVASPIQDEQSVICLSNIMTITQRRFHSNI
LANTSSILLYLFLRNIFVMSDIKIKEENLFCDNIKGNEIFPAQQVARLVECENVLVALEL
SNFLNDANFALQAVTQCYGLLAPIIYHNIVLVPVIQILIKCIVVLQGIPSIVHSKKSVSS
FESIQHMIACCIFYMTKILRSWKEYDLAIMLIYYGKKMLDITSACKSLFGVEQEENTEEG
TCSKKISKTKKPQQVLLPEKINEQLALLETHLLKMTKQVPSTELSGSEDPIFLYPVVLNW
TVKGAMKEVMKFKQRPRFLEFFTQIMLKCMNDEKFHLMVELSGPVCDFLKRRNESLIGVR
RIKYKENIVYRKALKSPRKFKAIVIEIGRSSDLPRRRRKKKETLKDFFYKNPSIFDMAEL
ERNRRTDVRKMAYRSLTDNLNPLILHYVKRKRFHQILLEELPWRAQMNLYLANAHFHLFL
QKLTERTKMRLSSSHSSVSFRSCDPNLFSLFHSGTVLPTAKLTVESYKAMMDVFNVSKKK
KYNQPTDIEDLSALFNSKSEDNVSKTKTQTIYESESQLGVGVNAKEKDRMLTWGLDHFMK
IFSCCRRAMVLAYRGGYWTLLQNCCRVFWNFSRELQMLLKQTMDTCKTFPISQDSFLCIC
VLPFYLGTELLIDMLIKLQSTNSVKSFEEKGEFSIPSCYGNIKSDNGGSSLIFEHPLDDV
NVVDLRWIHDFVLKSLEVLYQVEKWETLVSLAIQFNIISHERYTEQVTPLLVYAQRQLVL
RIQQLNGPNLSHQACARYEAENGEKITCRNFIGKQLKIDHSTPKNLPELEGNSDPLKMLI
ISEHKRAKQIVSVPLDVNDTLRCFRETLEKSKYHNRSVRHSRKLLSLFLAQTQGERGGMD
NSKLTPGKVEFCLGTEEMHMPTPPDLSQENFRVFSSVEKSKLPSSQLGLVISSYYQTIDV
LQASNQRSLKVQTLHSLGSLLIFADKKRAAFKCWSQALDDIFRKPDVLHNWKEFGTSLPN
ATSGSSPPGFKDYSEEFLSKFGIWGCLQGAVISAKIAQFIKTANVKKRTNCCILSALLFQ
SLLRTTLPHPKAERNYAQYEITQLLPGIELFSDRFRADICSVIASLYYVIRELHYAKYNL
IVLPLLALYQYFVSVICQDIVRNLEARILKIEILIDLGFFSEAFYELSQIYHGKNMPCDI
PAGYKATTKVKITQSFDSGKPLTNKDNMQALEELINKGLPPILVNLGFQHLLNKFNFVKS
HFFISLAGTVNCIPDNSLKIMYHTVVDKSKPTSQSLKDNENSHGQFLRFRDEYTLNTIKS
ILLMEAEDKVNSLLSEIEHQCHKPLYLSSVAELEIMVEGRLHLAAIALQRYRPAYSAAII
YSTLKLLQDSKVFKKRQPEESCSPISPETSTTESKDDSEFLDPISLNSREYFNIHLWLRC
RLMLVTSFVAQIRGIGIMKESELTGCLSLINEVCTEAKSADDTEVLAEFLMQAVILGLQE
KHFKADIIRKLQEIISLLEGSEFLSPRSWLTLAKSLILMDDLTKAEKFKKASSKENKLIF
LNQAHRILIAQMLTFGETIEFPLSDADYASPLQPLKNIYLPHVMLLAKIKLRIGHTLAKQ
VSFGGKRKDISKWLPVLHIFDMALKVCRATATEEYEVEAEILFQKGRIERQMLMEEKSPI
AHVESFFEAIQISLRNDQNPGLIRDSYLEIALMYFYLKKPRKKVSATTLKPLPRRLSSFK
EPVATRLEMYSSLAWIAIRAAAQVSESVLGINLLIGKKNARTDKVNNMTLPTIPEFAAVD
LLSSYTDYLLENYQVVFQTSSSIMCENTDVYDCLDGRKRNLSKVDITWILLIRYYIHLQR
INNMSKLLASATPVSGISLPDDTLLTSLYNAELIFRQKEMHLFLKRFLQLYASSCIDGFP
RELLQGLENLIPLEKVLFESSGKVHRDSSLQSDLSGKLAGSPSYTEISSEMAVQALNKEL
CFQWYIPPLDKPPKDAEPMVLLLYAYNLKPLKITDIKVPTGNNLCVGTSWIPLRRVIEVH
EKLSNLAQIAEISLPSVPEVTSEEHIYESVESEDKTIDTDMENMILECCSEIAALFSTDK
DKDKDPSPLTEVPFDVSLPAIFSLERLFDLANGCIVSIGSLFNWVVSLLP
NT seq
9513 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccagcagctcctccagctcctctgatgtgtccccggactctgagacatcg
gtgtcgccggtgcaactgcccccaacgccaccaccaacttccaccgcggttctcaagtcg
cccaccgagtccaagtcgagctcgaccaacccggcgcagtggacctgctccgaggactcg
ctgccctctgccgccttctatgggcccctggacagtaaaaacccgctcctggcatcttgc
gagaaggagatccgggagctgttgggctttatgaagaagaataaggctctaactacctca
gaggaacagaagcacgaattccatcggaggtgtgccaccactctgtttaatatctggacc
aaatacgcccccaggctgccaacggactattacaacgagaagcttttgaaggttggagac
agcctctgtcaaataaaagaatacaagctggctcttctgcagtgctacgggcggtatctc
caggagttcattactgatttcgacgagcagaaagaagacgtaaatcatttcaaaactgtc
ttcttcccaaaaggctttggagatgaaacggctagacttacatttcatgctttgagtgga
aaaaatatttgcaactaccagctggtctgtgaaagtgatgccaacctgaagaacgaagaa
tctgtgagacagtgtctgcacattttgtcttcctttaggctcatcatgcaggtggctctc
ccccaggagcacctctgctggattgtcttcaacggtaccctttacatctacaccatttgt
cgaaagctgatgatcataggacagtcttccaaggccttagagttcctgctgtgggccagc
atgtgcatggaatcctctgtcccgctcctgtctgtcaggtacctttcatggagagccact
ctctacactgctgtctgccagtgccactacgactgccaggccggcatccacggggaggca
tttgctcggcgtgcgttagccaaaattgatgagttaaggcaactggaattaatgagctcc
tccgcgtctatggaaacctcccgaaaatattacagagaggccacgataaagatggccgtg
atgatctttaaaagaggagtatttgagtctagaagaaaaaacaaaaatgtgttcagaccg
aagataagactcaacctaaaggaagctcaaagcttgccctggccacggacggtcactgaa
cggctgctggatgagcttcttgacagcacatcctcccggtttctggctgtcttggaggcc
ctctctgactcaaacaggcgaatcctgcagaccggaccgctggttactgacgaaatggaa
ctgcgcgatgttgtgtcggagctgtttatggccggaaaagagcttttgatactttcaaat
gttggttcgagtggaaaactcgatttccctcaaacaagtcttcaggaaaatgtagtagaa
aggaaaaatattatttctgtggatgcgtctgtgaagtttgcaaagttggctttcacttac
gaagaatggggattatttgaatcactagcgggacaacttattcagtttctccagaagcag
gccagccccgagtcaaagaaagccaagaaggatttaattcttctgcttgcggtcgagccg
ctgatcaatgtgaagaaaaccagaggtttgatctttcccttggatactgacaaggagaca
cagtccgttcaaagttacctaaaacacatagctagtcacgagtcttgtgtgaggaccaca
ttcaccgaagatatctttagcttggcagcaattcttcacttctgtgtctgtaaccctacc
aagggtgttcagccggataaggacatcgtggtggacgtaatagcgctcttatggcagaga
tgcaagctgggaattcaaaggctcaacatacccaaaaacgactttgcaaaatatactcat
aagatcagcactaacaaatgggtttatctcctgtggcagataagcgaggtgatgcattgc
tataaactggaagacctggacatcgtgatggtggcagagatcacgttacgattaagtgaa
atactagagtctctgggaaacccgaaaagaaaattcaaaaaatctgcagatttatctaca
aagaaagggcctgatgaggtgtctgggacttcaaagggggtcctggaaatccttccaata
ttaaagcgaacacccgtggagcagctgttttatgcgtatgaactccttgataaatcaatc
actggcatgaactggaattgcatgttaactactctgtcagatggatcatctgtaattgac
cattgctatgtcaaggactctcatgacgtagatggagacacgtacaagccgatctcatcg
aacagctacatgatggacctgcatcttgaattaattcaagctcagcaccgcatagcagtt
gtgcttctcgaccaactggaagttttgcagactccagctgttagcacaaacacttctgcc
aaaggttgggaaaaattaaagaagcccagaaacaccgagtgtttctcagagttaactgta
atgaagaaaataaagaagaacaagctgtccaaagccgtctacctgatgcagaaggctctt
ttactatttgagaaagacacggtgtgcgagacttcatggaacttgttgatggaagcctgt
gccttaattgagaaggtcgaagcagaacaaaatgccctatattcctatcagaagtacttg
gagagttcaaaaataaagaagacccgaatccctcccccacccatcctgctggctcgcaca
cactgctctgtgactctgaagcctgcaccgttcatctcagatgttaaggcgtcctggtac
tgtattttgggttgcaaagcagaaggaagctacgggaaagtaaggctgaacaacaaccat
ctcccaaactcaggagaagcgataccagccgatggcagaagcttctttgaaattaaaggt
ctggagacgaacgcaaactacatttttgcgattgctgcttactcttccatcgggaaactc
attggcgatgccatcggggagacaacgaagccaattctcatttacccgactctctctgct
gtcaccgctcggatgtacctgacacaggtcgcttatcagatcggtaactacgagatggcc
aagaaagtgttctcaccagtctgggattatttcgttgcctctccaatacaggacgagcag
tcggttatctgcctaagtaacattatgacaataacgcagagaaggtttcattccaacatc
ttggcaaacacttcttcgatcctcttatacctcttcctcagaaatatctttgtgatgagc
gacattaaaattaaagaggagaatctcttctgtgataatatcaaaggcaacgagattttc
cctgcccagcaggtcgctagactggtggaatgtgagaatgtgctggtggctctggagctt
agcaatttcctcaatgatgccaacttcgcccttcaagcagtgacccagtgctacgggctc
ctcgcccccatcatctaccacaatatcgttttggtacctgtcatccagatcttgataaaa
tgtattgtggttttgcaaggaataccaagtattgttcactcaaagaaaagtgtttcaagc
tttgaaagtatacagcacatgatagcttgctgcatcttctacatgacaaagattctccgt
tcctggaaggaatatgacctggcaataatgcttatatattatgggaaaaagatgttggat
atcacatcagcgtgcaagtctctttttggtgttgagcaagaggaaaatacagaggagggt
acttgttctaagaaaatttcaaaaaccaagaagccacagcaggtgctgttgcctgaaaag
ataaacgaacagctggccctgttggagacacatctactcaaaatgacaaagcaagttccc
tcaactgaactatctggatcggaggacccaattttcctgtaccctgtggttttaaactgg
acggtgaagggcgccatgaaggaagtcatgaaatttaagcaaagaccaagattcctggaa
ttctttacacaaattatgctcaaatgcatgaacgatgagaagtttcacctcatggtggag
ttatctggccctgtttgtgacttcttgaaaaggagaaatgagtcccttattggagtgaga
aggataaaatataaggagaatatcgtttataggaaggcactcaaatctcccaggaagttt
aaagccatagtgatcgagatagggaggtcttcagacttaccaagaagacgaaggaagaaa
aaggaaactctaaaagactttttctacaagaatccatccatttttgacatggcagagctg
gaaagaaacaggagaactgatgttagaaaaatggcgtatcgaagcctgacagacaacctg
aaccccttaatcttacattatgttaaaagaaaaagattccatcaaatacttcttgaagag
ctgccttggagagctcagatgaacttgtatctggcaaacgcacacttccatttgttttta
caaaagctgaccgagcgcacaaagatgagactcagttcttcgcattcgagtgtcagtttc
cggtcatgtgaccctaacctcttctcactattccactctggaacagtgttaccaacagca
aagctgactgttgagagctacaaagcaatgatggatgtctttaatgtctctaagaaaaag
aaatacaaccaacccacagatatagaagatttatctgcactcttcaattccaaaagcgag
gataatgtttccaagacgaaaacacaaacaatttatgaatcagagtctcaactaggcgtt
ggcgttaatgccaaagagaaggatcgaatgctgacttggggactggatcattttatgaaa
atcttctcatgttgcaggagagcaatggttcttgcttaccgtggtggctactggactcta
ctgcagaattgctgcagggtcttctggaacttttcccgggagctgcaaatgcttctgaag
cagactatggatacttgcaaaacttttcctattagccaggatagctttctctgcatctgc
gtgttacccttttacctgggcacagaactacttattgacatgttaataaaactgcaaagc
accaattctgtcaagtcgttcgaggagaaaggcgagttcagcattcccagctgttatggg
aacatcaaatctgataatggaggttccagcctgatttttgaacatcctttggatgacgtc
aatgtggtggatttgagatggatccatgactttgtgttgaagtctctggaggttctgtac
caagtggagaagtgggaaacactggtgtctcttgccattcagttcaacatcatttcacat
gagaggtacacagagcaagtgaccccactgttggtgtatgcgcagcgccagctggtcctg
aggatacagcaattgaatggccccaatctctcccatcaggcttgtgccagatatgaggct
gaaaatggagagaagatcacctgtcgaaacttcattgggaagcagctcaagattgatcat
tccacacccaagaacctgcctgagttagaaggcaattcagacccactgaagatgctcatc
atttcagagcataaacgagccaaacagattgtctctgtgcccctggacgtgaacgacact
ttgagatgcttcagagagaccctggaaaagtccaaatatcacaacagatccgtccgacac
agcagaaagctgctttctttatttcttgcacagacacaaggtgaaagaggagggatggac
aactcgaaacttaccccagggaaggtggagttttgcctgggaacagaagagatgcacatg
ccaacacctcccgacctttcccaagaaaacttccgagtttttagttcagtggagaaaagc
aaacttccatcttcacagctggggctggtcatttcttcctactaccaaactattgatgtt
ctccaagccagtaatcaaaggagccttaaagtccagacattgcattccctcggaagcctc
ctcatctttgcagataagaaaagggctgcctttaaatgttggagccaagctcttgatgac
atcttcagaaaaccagacgttctgcacaactggaaagaatttggcacctccctccccaat
gccaccagcggctcctcacctcctggtttcaaagactacagtgaagaatttctatcaaaa
tttggcatctgggggtgtttgcaaggggcagtgatctcagcgaagatagcgcagtttatt
aagacggcgaatgttaagaaaagaaccaactgttgtatattgtctgcgttgctctttcag
agtctgcttcgtacgacgctcccacatcccaaagccgaacgtaactatgctcagtacgaa
attactcagctcctccctggcattgagctcttctcggacagattcagggctgacatctgc
agtgttatcgcaagcctgtactacgtcatccgagaactgcactacgctaagtacaacctc
atagttctgcctctccttgcactgtaccaatattttgtgtctgtcatttgccaagacata
gtcagaaatctagaagcaagaatcctcaagatcgaaatccttatagatttaggcttcttt
tcggaagccttttatgaactatcccagatttatcatggaaaaaacatgccgtgcgacatc
cctgctggctataaagcaacaacgaaagttaagataactcaatcattcgattctggaaaa
cctctcactaataaagacaacatgcaggcccttgaagagctaataaacaaaggcttgccc
cctattctggttaatcttggcttccagcacctcttaaataaatttaattttgtcaagtca
cacttcttcataagcttggctgggacggtaaactgtatccccgataactcactgaaaata
atgtaccacacggttgttgacaagagcaaacccacctcccaaagcctaaaagataatgaa
aactctcacggtcagtttttgcgatttagagatgaatacacgcttaacaccatcaagtcc
attttacttatggaggctgaggacaaggtcaactccctgttgtccgagatagagcaccag
tgccacaagcccctctatctgtcctctgttgcggagctggagatcatggtggagggcagg
ctgcacctggcagcaattgccctgcagagataccggccagcttacagcgctgctataata
tattccacactgaagcttctccaggattcgaaggtgtttaaaaagagacagcctgaagaa
tcatgcagccccatctctccagaaacttctaccacagaaagtaaagatgacagcgagttt
ttagaccccatttccctgaactcccgggaatacttcaatattcacctttggctgagatgc
cgcttgatgctggtgacctcgttcgtcgcacagattcgtggtattggaatcatgaaagag
agtgagttgacgggctgtctgagccttatcaatgaagtgtgcacggaggcaaagagcgcc
gatgacacggaggttctagccgagttcctaatgcaagctgtgatcctgggccttcaggag
aagcactttaaggcagacatcataagaaagcttcaggaaattatcagtttgctggaaggc
agcgaattcctttctcccagatcttggttaaccctggcaaaaagcctcattctgatggat
gacttaacaaaagccgagaaattcaagaaagcatcttcaaaagagaacaaattaattttc
ttgaatcaagctcacagaattcttattgcacagatgttaacttttggagagaccattgag
ttccccctctcagatgccgactacgcgagcccattacagcccttgaagaatatctacctt
cctcatgtgatgttactggccaaaataaaattgaggattggacacaccttggccaagcag
gtatcttttggcggcaagaggaaggacatcagtaagtggctgcctgttcttcacatcttt
gacatggctttgaaggtctgtagggcaaccgccacagaagaatatgaagtggaggctgaa
attctgtttcagaaaggcagaatagagcgccaaatgctgatggaagagaaatctccaatt
gcacacgtagagagttttttcgaagctattcaaataagtctgagaaatgatcagaaccca
gggttgataagggattcctaccttgaaattgccctgatgtatttctatctgaagaagcca
aggaagaaggtttcagcaacaacactcaagcctcttcccagaaggctcagttcttttaaa
gaaccagtagcaactcgattggagatgtatagctcactggcctggattgcaataagagct
gctgcacaggtcagtgaatctgtgctggggatcaacctcctgataggaaagaagaatgcc
aggactgacaaagtcaataacatgacattgccaaccattccagagtttgccgctgtggat
cttctgtcttcgtatacagattatttactcgaaaactaccaagttgttttccagacttcc
agttcaattatgtgcgaaaatactgatgtgtatgactgtttagatggtagaaagaggaat
ctctccaaagtggatattacgtggatccttctcattcgctactatattcacctacaaaga
atcaacaacatgagcaaactgctagcatctgcaactccagtctctgggatttctttgcct
gatgacacactcctcacatccctgtacaacgctgaactgatttttcgccaaaaggaaatg
catcttttcctgaaacgattcttacagctctacgcttcttcatgcatcgatgggtttcca
agggaacttcttcaaggtttggaaaacctcattccactagagaaagttctgtttgaatca
tctggcaaggttcatcgggacagttccctgcagtctgatttatctggaaagcttgctggc
agcccatcttacacagagatctcatcagaaatggcggttcaagctttaaacaaagaactt
tgctttcagtggtatattcctcccctggacaaacctccgaaggatgcagaacctatggtt
ttattattgtatgcctataacctgaagcccctgaagattacagatattaaagtgcctacc
ggtaacaacctgtgtgttggcacctcctggattccactgaggagagtcatcgaagttcat
gagaaactatctaatcttgcacaaatagccgagatatccttaccctcagttcctgaagtt
acttcagaggaacatatctacgaatcagtagaatctgaagataaaacgattgatacagac
atggaaaacatgatcctcgaatgttgctctgaaatagcagctctgttttccactgacaaa
gacaaagacaaagacccctcgccactgaccgaggtgccatttgatgtctccctgcctgcg
atattcagcctcgagagactctttgatcttgcgaatggttgtattgtgtcaataggaagc
cttttcaactgggtggtgtcacttcttccctga
DBGET
integrated database retrieval system
