Arvicanthis niloticus (African grass rat): 117696550
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Entry
117696550 CDS
T08817
Symbol
Prdm4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04722
Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
117696550 (Prdm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117696550 (Prdm4)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117696550 (Prdm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf_PR_Knuckle
zf-C2H2
zf-C2H2_4
SET
zf-met
zf-C2H2_jaz
Mu-like_Com
PyrI_C
Motif
Other DBs
NCBI-GeneID:
117696550
NCBI-ProteinID:
XP_034343392
EnsemblRapid:
ENSANLG00005025204
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MNDMNLSPVGMEQLSSSSVSNALPVSGSHLGLAASPSHSAIPAPGLPVAIPNLGPSLSSL
PSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRPPPQY
IHPNSINVDGNTALSVTNNPSALDPYQANGNVGLELGIVSIDSRSVNTHGAQSLHPNDGH
EVALDTTITMENVSRVTSPISTDGMAEELTMDGVTGEHSQIPNGSRSHEPLSVDSVSNNL
TADTVGHGGVIPIHGNGLELPVVMETDHIANRVSGMSDSTLSDSIHTVAMSTNSVSVALS
TSHNLASLESVSLHEVGLSLEPVTVSSITQEVAMGTGHVDVSSDSLSFVPSSLQMEDSNS
NKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQSIVGAD
VAGALPLIGVWTAETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHVWKIYHNGVLEFCII
TTDENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPENELLFYYSRNYAQQIG
VPEHPDVHLCNCGKECSSYSEFKAHLTSHIHNHLPSQGHSSSHGPGHSKERKWKCSMCPQ
AFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQ
KAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLRTNHL
KKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLRTCKEPASSSPAQEEEEDDSEEEDLADS
MRTEDCRMSSAVYSTDEALATHK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacatgaacttgagcccagtggggatggagcagctgtcttcatcctctgtgagc
aatgccctgccagtctcaggaagtcacctgggtttggcagcctctccctctcacagtgcc
atccctgccccaggacttccagtggcaattccaaacctgggtccctccctgagctctctg
ccttctgccttgtccctcatgctccccatgggcatcggagatcgaggagtaatgtgtggg
ttacctgaaagaaactataccctacctccaccaccttaccctcacctagaaagcagttac
ttcagaaccattctacctggcattttatcttatttagctgacagaccacctcctcagtat
atccaccccaactctataaatgttgatggaaatacagcattatctgtcaccaacaaccct
tcagcactggatccctatcaggccaatggaaatgttgggttagagctaggcattgtttca
atagactctcgctctgtaaacacacatggtgcccaaagtcttcatcctaatgatggccat
gaagtagcgttggacacaacaatcactatggagaatgtttctagggttaccagcccaatc
tccacagatggaatggcagaggagcttacaatggacggtgttacaggagagcattcccaa
atcccaaatggctccagaagtcatgagcctctgtctgtggattctgtgagcaacaacctt
acagcagacactgtaggacatggtggtgtcatacctattcatgggaatggtctggagctt
cctgtggtcatggagacagaccacattgcaaaccgggtcagtgggatgtctgacagtacc
ctcagtgactccatccacaccgtagccatgagcaccaactctgtaagcgtggcactctct
acctcacacaacctggcctccctagagtctgtttctctccatgaagttggccttagccta
gagcctgtgactgtctcttccatcacgcaggaggttgccatggggacaggtcatgtagat
gtgtcctcagacagcttgtcttttgtaccatcttcattgcaaatggaagactccaattca
aacaaggaaaacatggcaaccttgtttacaatttggtgcactctttgtgaccgagcctac
ccctcagattgccctgatcatggaccagtgacatttgttcctgataccccaatagagagc
agagcaagactatccctcccgaagcagcttgttctccgccagtccattgtgggagcagat
gttgctggtgcccttccattgataggagtatggactgcagaaaccattcctgtgcggact
tgcttcgggcctctaattggtcagcagagtcactccatggaagtagcagagtggacagac
aaggcagttaaccatgtctggaagatataccacaatggtgtcctcgaattctgcatcatt
acaactgatgaaaatgagtgtaattggatgatgtttgtgcgcaaagccaggaaccgtgaa
gaacagaatttggtggcctatccccatgatgggaaaatctatttctgtacctcacaagac
atccctcctgagaatgagctgcttttctattacagccggaattatgcccagcagataggt
gttcccgaacacccagatgtgcacctctgtaactgtggcaaggagtgcagttcctattca
gagttcaaagctcatctgaccagccacatccataaccatctccctagccagggccacagc
agcagccatgggccaggccacagcaaggaaaggaagtggaagtgttcaatgtgcccccag
gcctttatctctccttccaaactccacgttcactttatgggtcatatgggtatgaagccc
cacaagtgtgatttttgtagcaaggcttttagtgacccaagcaacctacggacacacctc
aaaatccatacaggtcagaagaattataggtgtactttgtgtgacaagtctttcacgcag
aaggctcacctggagtctcacatggtcatccacacgggtgagaagaatctcaagtgtgat
tactgtgacaagctgttcatgcggagacaggacctcaagcagcatgtgctcatccacaca
caagaacgccagatcaagtgtccgaagtgtgataaactgttcctgagaacaaaccacttg
aagaagcatctcaattctcacgaaggaaaacgagactatgtctgtgagaaatgtacaaag
gcttatctaaccaagtaccacctcacccgccacctgaggacctgtaaggagcccgcctcc
agttccccggcacaggaggaagaggaggatgactcagaggaggaagacctggcagactcc
atgaggacagaggactgcaggatgagcagtgctgtttactcaacagatgaggctctggct
acgcataagtag
DBGET
integrated database retrieval system
