Arvicanthis niloticus (African grass rat): 117696849
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Entry
117696849 CDS
T08817
Symbol
Pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
anu03009
]
117696849 (Pwp1)
Ribosome biogenesis [BR:
anu03009
]
Eukaryotic type
90S particles
Other 90S particles
117696849 (Pwp1)
Pre-60S particles
Other pre-60S particles
117696849 (Pwp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
WDR54
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_RIG_1st
PALB2_WD40
Beta-prop_DCAF12
MS_C
Motif
Other DBs
NCBI-GeneID:
117696849
NCBI-ProteinID:
XP_034343717
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MNRSRQVTCVAWVRRGVAKETPDKVELSKEEVKRLITEAKEKLQEEGGSEEEESGSPSED
GMQSAGTQAQPGEPLEDGDPQEDRTLDDDELAEYDLDNYDEEDSPDAETIGESLLGLTVY
GSNDQDPYVTLKDTEQYEHEDFLIKPTDNLIVCGRAEQDQCNLEVHVYNQEEESFYVHHD
ILLSAYPLSVEWLNFDPSPDASTGNYVAVGNMTPVIEVWDLDIVDSLEPVFTLGSKLSKK
KKKKGKKGSSAEGHTDAVLDLSWNKSVRNVLASASADSTVILWDLSVGKSAARLTAHTDK
VQTLQFHPFEAQTLISGSYDKSVALYDCRDPSQNHRLWRFSGQIERVTWNHFSPCHFLAS
TDDGFVYNLDARSNKPIFTLNAHNDEISGLDLSSQVKGCLVTASADKFVKIWDILGDRPS
LVHSRDMKMGVLFCSSCCPDLPFVYAFGGQKEGLRVWDISTVSSVNEAFGRRERLVLGST
KGLSVRGPCGSRSPQTPMES
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcagccgccaagtgacctgcgtggcctgggtccgccgcggcgtggccaaagag
acaccagacaaggtagagctaagtaaagaggaagtgaaacgtctcattactgaagcaaaa
gaaaaattacaagaagaaggtggaagtgaggaggaggagtcaggcagtccttcagaagat
ggcatgcagagtgccgggacccaggcacagcctggggagcccctggaggatggggaccca
caagaggaccgcacactagatgatgacgagctggcagaatatgacttagataactatgac
gaagaggacagcccagatgctgagaccattggtgaatctctgttgggtcttacagtctat
ggcagtaatgatcaggacccatatgtcaccctgaaggacacggaacaatatgaacatgaa
gatttcttgattaagccgactgacaacctcatcgtttgtggccgtgccgagcaagaccag
tgcaatttagaggtacacgtctacaatcaagaagaggagtctttctatgtccaccatgac
atactcctgtctgcataccctctgagtgtggaatggctgaattttgatcctagcccagat
gcatctactggaaattacgttgctgtgggaaacatgacccctgtcattgaggtgtgggac
ctggatatcgtggactctctagaaccagtcttcacactgggaagcaagctttccaaaaag
aagaagaagaaagggaagaagggctcctcagcagaaggacatactgatgctgtcctggac
ctttcctggaataagtcagtcagaaatgtgctggcaagcgcctcagcagacagcactgtg
attctctgggacctgtctgtggggaagtcagcagccaggctcactgctcatacagacaag
gttcagactctgcagtttcatccgtttgaggcacagactctgatttctgggtcctatgac
aaatcggtggctctgtatgactgcagagatcccagccagaaccaccgcctatggcggttc
agtgggcagatcgagagagtgacctggaaccacttctcaccgtgtcatttcttggccagt
acagatgatggctttgtatataatctggatgcacgctcaaataagccaatttttacactt
aatgcacacaatgatgaaatctctggtcttgatctgagcagtcaggtcaaaggctgcctt
gtgactgcgtcagcagacaaatttgtgaagatctgggacatcttaggagacaggccaagt
ctcgttcactctagagacatgaaaatgggagttctcttttgttcttcatgctgtcctgac
ttgccatttgtttatgcctttggaggacagaaagaagggcttcgggtttgggacataagc
actgtctcttcagtaaacgaagcgtttggcagacgggagagactggttcttggcagcaca
aaaggtttatctgtcaggggcccctgtgggagcaggagcccacagacaccaatggagtcc
tga
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