Arvicanthis niloticus (African grass rat): 117697552
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Entry
117697552 CDS
T08817
Symbol
Six1
Name
(RefSeq) homeobox protein SIX1
KO
K15614
homeobox protein SIX1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
117697552 (Six1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117697552 (Six1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
117697552 (Six1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
117697552
NCBI-ProteinID:
XP_034344621
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQSNMGH
ARSSNYSLPGLTASQPSHGLQAHQHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgctgccgtcgtttggctttacgcaagagcaagtggcgtgcgtgtgcgaggtt
ctgcagcaaggagggaacctggaacgcctgggcaggttcttgtggtcgttacccgcctgc
gatcacctgcacaagaacgagagcgtgctcaaggccaaggcggtagtcgccttccaccgc
ggcaacttccgcgagctctacaagatcctggagagccatcagttctcgcctcacaaccac
cctaaactgcagcagttgtggctgaaagcgcactacgtggaggccgagaaacttcgcggc
cgacccctgggtgccgtgggcaaatatagggtgcgccgaaaattcccgttgccgcgtacc
atctgggatggcgaggagaccagctactgctttaaggagaagtctcggggcgtgctgcgg
gagtggtacgcgcacaacccctacccttcgccgcgggagaagcgggagctggccgaggcc
accggcctcaccaccacccaggtcagcaactggtttaagaaccggaggcaaagagaccgg
gctgccgaggccaaggaaagggagaacaccgaaaacaataactcgtcctccaacaagcag
aatcaactctctcctctggaagggggcaagccgctcatgtccagctcagaagaggaattc
tcacctccccagagtccagaccagaactcggtccttctgctccagagcaatatgggtcac
gccaggagctcaaactattctcttccaggcctgacagcctcacagcccagccacggcctg
caggcccatcagcaccagctccaagactctctactgggcccactcacctccagtctggta
gacttgggttcctaa
DBGET
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