Arvicanthis niloticus (African grass rat): 117697640
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Entry
117697640 CDS
T08817
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
anu03037
]
117697640
Cilium and associated proteins [BR:
anu03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
117697640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
Rapsyn_N
TPR_14
RPN7
TPR_16
TPR_NPHP3
TPR_6
TPR_19
TPR_17
TPR_9
ANAPC5
TPR_11
OrgC
T4SS
Motif
Other DBs
NCBI-GeneID:
117697640
NCBI-ProteinID:
XP_034344663
LinkDB
All DBs
Position
Unknown
AA seq
2338 aa
AA seq
DB search
MMKWQPRKKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDT
LEPTYQQLQKMKLDKSPFVVVSVVGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFS
ALSSAHWSLGNTEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHR
HQLVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDDLSEARELG
NMGAVYIAMGDFENAVQCHEQHLRIAKDLGSKREEARAYSNLGSAYHYRRNFDKAMSYHN
CVLELAQELMEKPIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASS
NLGIIHQMKGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHR
QELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALS
NLGNFHCSRGEYVQAAPYYEQYLRLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYE
QDLALAKDLHDKLSQAKAYCNLGLAFKALLNFTKAEECQKYLLSLAQSLDNSQAKFRALG
NLGDIFVCKKDVNGAIKFYEQQLGLSHHVKDRRLEASAYAALGTAYRMVQKYDKALGYHT
QELEVYQELSDLPGECRAHGHLAAVYMALGKYTMAFKCYQEQLELGRKLKEPSLEAQVYG
NMGITKMNMNVMEDAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIK
HYEQYLSVAQSLNRMQDQAKAYRGLGNGHRATGSLQQALVCFEKRLVVAHELGEASNKAQ
AYGELGSLHSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQ
YHQLDLQIAEETDNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLVAKTV
SYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQH
QLYRASALFETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTR
AFADLLVERQTGQQDSDPYSPITIDQILEMVNAQRGLVLYYSLAAGYLYSWLLAPGAGIL
KFHEHYLGDNSVESSSDFQAGSSATLPVATSSTLEQHIASVREALGVESYYSRACASSET
ESEAGDIMEQQLEEMNKQLNSVTDPTGFLRMVRHNNLLHRSCQSMTSLFSGTVSPSKDGT
SSLPRRQNSLAKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLVPFALLK
GSASNEYLYERFTLIAVPAVRSLGPHSKCHLRKTPPTYSSSTAMAAVIGNPKLPSAVMDR
WLWGPMPSAEEEAYMVSELLGCQPLVGSMATKERVTSALTQAECVHFATHVSWKLSALVL
TPNTEGNPASSKSAFGHPYTIPESLRVQDDASDVESISDCPPLRELLLTAADLLDLRLSV
KLVVLGSSQEANSRVTADGLVALTRAFLAAGAQCVLVALWPVPVAASKMFVHAFYSSLLN
GLKASASLGEAMKAVQSSKAFSHPSNWAGFTLIGSDVKLNSPSSLIGQALTEILQHPERA
RDALRVLLHLVEKSLQRIQNGQRNAMYTSQQSVENKVGGIPGWQALLTAVGFRLDPAASG
LPAAVFFPTSDPGDRLQQCSSTLQALLGLPNPALQALCKLITASETGEQLISRAVKNMVG
MLHQVLVQLQACEKEQDFASAPIPVSLSVQLWRLPGCHEFLAALGFDLCEVGQEEVILKT
GKQASRRTTHFALQSLLSLFDSTELPKRLSLDSSSSLESLASAQSVSNTLPLGYQHPPFS
PTGADSIASDAISVYSLSSIASSMSFVSKPEGGLEGGGPRGRQDYDRSKSTHPQRATLPR
RQMSPQARRGASKEEEEYEGFSIISMEPLATYQGEGKARFSPDPKQPCVKAPGGVRLSVN
SKGSVSTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEDSTPKLD
PQELAQRILEETKSHLLAVERLQRSGGPASPDREDGVVAPSSTTVFRASETSAFSKPILS
HQRSQLSPLTVKPQPPARSSSLPKVSSPVTSEVSGKDGLSPPGSSHPSPGRDTPVSPADP
PLFRLKYPSSPYSAHISKSPRNTSPACSAPSPALSYSSAGSARSSPADAPDEKVQAVHSL
KMLWQSTPQAPRGPRKLCRGAPGTLTSKRDVLSLLNLSPRHGKEEGGADRLELKELSVQP
RDEAPPKVPTNGHWCTDTATLTTPGGRSTTAATRPLRLPLANGYKFLSPGRLFPSSKC
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatggcagccccggaagaaggcatacttccgacagggtgttgccctccagtac
cttggacgtcacgcggacgccctggcagcctttgcgtctgggctggctcaagaccccaaa
agtctccagctcctggtgggaatggtggaagctgccatgaagtctcccatgagagacacc
ctggagcccacttaccagcagcttcagaaaatgaaactggacaagagtccctttgtggtc
gtgtctgtggttgggcaggaacttctgacagccggacaccacggggcctccgtggttgtc
ttagaagctgctctgaagattggcacttgcagcctcaagctgaggggctctgtgttctcc
gccctgagcagtgcacactggtctcttgggaacacagagaagagcactgggtacatgcag
caagacctggacgtagccaagaccttaggtgaccagacaggagaatgccgagctcacggg
aacctaggctctgcattcttttccaaggggaattaccgagaggccctcacaaaccacagg
catcagctggtgctcgccatgaagctcaaggaccgggaggcagcatcatcagccctgagc
agcctgggtcacgtgtacacagccatcggagactatcccaacgctctggccagccacaaa
cagtgcgtccttctcgccaagcagtccaaagatgacctttctgaagcccgagaactcgga
aacatgggagccgtgtacatcgccatgggcgactttgagaatgccgtgcagtgtcatgaa
caacacctgcggatagccaaggacctggggagcaagcgcgaggaggcccgggcctacagc
aacctgggcagcgcctaccactaccggaggaactttgataaggccatgtcctaccacaac
tgtgtgctggagctggcgcaggagctgatggagaagcccattgagatgcgagcctacgct
ggcttgggtcatgcagccaggtgcatgcaggacctggagagggcaaaacagtaccacgag
cagcagctgggtatcgcggaggacctcaaggaccgggcggcggaaggccgcgcatcctcc
aatctggggatcatccaccagatgaaaggcgattacgacacagccctgaagctccacaag
acccacctgtgcatcgcccaagagctgagcgactatgcagcccaaggccgcgcctacgga
aatatgggcaatgcctacaacgccctgggcatgtacgaccaggctgtcaagtaccaccgt
caagagctgcagatctccatggaagtaaacgaccgtgcctctcaggcatcgactcatggg
aacctggctgtcgcctaccaggccctgggagcccatgaccgggcgctgcagcactaccag
aaccacttgaacatcgcccgggagctgagagacatccagagcgaggcccgggctctcagc
aacctggggaacttccactgctccagaggagagtatgtccaggccgcaccctactacgaa
cagtacctccgcctagctcccgacctccaggacatggagggagaaggaaaggtctgccac
aacctcggctatgcccactactgcctcgggaactaccaggaggccgtgaagtactatgag
caggatctggctctggccaaagaccttcatgacaaactgagccaagcaaaagcctattgc
aacttgggcctggccttcaaggctctgctgaacttcactaaagccgaggagtgtcagaag
taccttctgtccctagcccagtccctggataattcccaggcaaagtttcgagccctaggg
aacctgggtgatatctttgtctgcaagaaggatgtaaacggtgcgatcaaattctatgag
cagcagctgggcctgtctcaccacgtgaaagaccgaaggctggaggccagcgcctacgcg
gcgctgggtaccgcgtaccggatggttcagaagtacgacaaggccttgggttatcacaca
caggagctggaggtctatcaggaactgagcgacctgccgggggagtgccgggctcacggg
cacctggcggctgtctacatggcccttggaaaatacacaatggcgttcaagtgctaccag
gagcagctggagctggggcggaagctgaaggagccgagtctggaagcccaggtgtacggc
aacatgggcatcacgaagatgaacatgaacgtgatggaggacgccattggctactttgag
cagcagctggccatgctgcagcagctcagcgggaacgagtctgtgctggacaggggtcgg
gcctacggcaacctgggggattgctacgaggccctgggggactacgaggaagccatcaag
cactacgaacagtacctgtctgtcgcccagagtctgaaccgcatgcaagaccaagccaag
gcctaccggggtctaggaaacggacacagggcaacggggagcttgcagcaggcccttgtg
tgcttcgagaagaggcttgtggtggcccatgagctcggcgaggcctccaataaagctcag
gcctacggagagctgggaagtctccacagccagttagggaattacgaacaggccatctcc
tgcctcgaacgccagctgaacattgccagggacatgaaggaccgagccttggaaagtgac
gcggcctgcggcctggggggcgtctaccagcagatgggagagtatgacacggccctgcag
taccaccagctcgatctgcagattgcggaggagacagacaatcccacatgccagggccga
gcctacgggaacctgggtctcacctatgagtccctgggcacttttgagagggctgtggtc
tatcaggagcagcacctgagcatcgcggcacagatgaacgacttggtggccaagaccgtg
tcctacagcagcctgggaaggactcaccacgccctgcagaactattctcaggcagtcatg
tacttacaggaaggtttaaggctagctgagcaactgggtcgaagagaagatgaagcaaaa
attcgccatggtcttggtctctccctttgggcaagcggaaacttggaggaggctcagcac
cagctttacagggcttcagcgttgtttgaaacgatccggcacgaggcccagctgagcacc
gactacaagctctccctgttcgacctgcaaacatcatcctaccaggccttgcagagggtg
ctcgtcagcctaggccaccatgatgaagccctggcagtagcagaaaggggccggacgaga
gcatttgctgacctgctggtggaaagacagaccggacaacaggactccgacccctactcg
cccatcaccatcgatcagatcttagagatggttaatgcccagcggggactagtgctgtac
tactctctggccgcaggctacctctacagctggctgcttgctcctggagcagggatcctg
aagtttcacgaacattacttgggtgataattcggtggaaagttccagtgatttccaagct
ggcagcagtgcaacgttgcccgtagcaaccagctctacactggagcagcacatcgccagc
gtccgagaggccctgggggtggagtcttactactccagggcctgtgccagcagtgagaca
gaaagcgaagctggggacatcatggagcagcagttggaggagatgaacaagcagctcaac
tctgtaaccgaccccacaggcttcctgaggatggtgcgccacaacaacctcctgcacagg
agctgccagagcatgacaagcttgttcagtggtacagtgtcacccagcaaggatgggacc
tcctctctgcccaggaggcagaactcactggccaagcccccactccgcgccctgtatgat
ctgctcatcgcgcctatggaagggggcttgatgcactcaagcggccccgtgggccggcac
cggcagctggtcctggttctggagggagagctctaccttgtcccctttgccctcctgaag
ggcagtgcctccaacgagtacctgtatgaacgctttacgctcatcgctgtgcctgccgtc
cgctcgcttgggccgcactccaagtgtcacttgaggaagaccccacccacgtattccagc
tccaccgccatggcagctgtcataggcaaccccaagctcccatcagcagtgatggacagg
tggctatggggcccaatgccctcagcagaagaggaggcatacatggtgtcagagcttctg
ggctgccagccccttgtgggtagtatggccaccaaggagagggtcacgagtgccctgacc
caggctgagtgtgtccactttgctacccatgtctcttggaagctatcagccttagtcctc
acccccaacacggagggcaaccctgctagcagcaagagcgccttcggccacccctacacc
atccccgagtcgctgcgggtgcaggatgacgcaagtgacgtggaaagcatctcagactgc
ccaccgctgagggagctgctgctcaccgccgccgacctcctggacctgcggctgtctgtg
aagctggtggtgctcggctcttcccaggaggccaacagccgagtcacggcagacggcttg
gtggcgctgacacgggccttcctagctgctggcgcacagtgtgtgctcgtggctctgtgg
ccggtgccggtcgcagcttccaagatgttcgttcatgccttctactcatccctgctgaat
ggcctgaaggccagtgcctccctgggggaggccatgaaggctgtgcagagcagcaaggcc
ttctcacatccctccaactgggcaggtttcacgcttataggaagtgatgtcaagctgaac
agcccctcgtcactcatcggccaagcgctcacggagatcctgcagcacccggagcgggca
cgggatgccctgcgtgtgctgctgcacctggtggagaagtccctgcagcggatccagaat
ggacagcgcaacgccatgtacacgtctcagcagagcgttgagaacaaagtgggtggcatc
cctggatggcaggctctcctcaccgcagtgggcttccggctggaccctgctgccagtggg
ctgccggccgctgtcttctttccaacctcagacccaggcgacaggttgcagcaatgcagc
agcactctccaggccctgctgggtctgcccaacccggctctccaagcactgtgcaagctc
atcacggcctcagagacgggggagcagctcatcagccgggctgttaaaaatatggtggga
atgctccatcaggtgctggttcagctgcaggcctgcgagaaggaacaggactttgcctcg
gcccccattccagtctccctcagtgtccagctgtggcggctcccagggtgtcatgaattc
ctggcagctctcgggtttgacctatgtgaagtgggccaagaggaagtgatcctgaaaacc
ggcaagcaggctagtcggcgcaccacccactttgctctccagtccctgctgtctctcttc
gattccaccgagctccccaagcgcctcagcctggacagctcgtcctccctggagtccctg
gcgtcggcacagtctgtgtccaacactctgcccctgggctaccagcaccctcctttctcg
cccactggggcagacagcattgcctccgatgccatctctgtctacagtctcagctccatt
gcttcctccatgagttttgtctccaagccagaggggggtttggaaggtgggggtccccga
ggacgacaggactatgataggtccaagagcacccacccgcaacgagccaccctgccacgg
cgccagatgtccccccaggccagacgtggggccagcaaggaagaagaagaatacgagggg
ttctccatcatcagcatggagcctctggcaacctaccaaggcgaggggaaggcacgcttc
tccccagaccccaagcagccatgtgtcaaggcaccaggtggggtgaggctttcggtcaac
tccaagggaagcgtcagcactcccaactcccccgtaaagatgaccctgatccccagccca
aactcaccctttcagaaagtgggaaagctggcaagctcagacacaggtgagtcggaccag
tccagcacagagaccgacagcactgtgaagtcccaggaggacagcaccccaaagctggac
ccccaggagctggcccagaggatcctagaggagaccaaaagccacctcctggcagtagag
cgccttcagaggagtggtggcccagctagcccagaccgagaagatggcgtggtggcaccc
agcagcaccacggtcttcagggcctcagagaccagcgccttcagcaagcctatcctgtct
catcagaggagccagctgtcaccactcactgtcaaaccacagcccccagccaggagctca
tcccttcccaaggtgagcagccctgtcacatcagaggtgtcaggcaaggatggcctgagc
cctcctggcagcagccacccatcacctggccgtgacaccccagtctccccggcagacccg
ccactcttcagactcaagtaccccagctctccttacagcgctcacatttccaagtccccc
cggaacacgtcccctgcatgcagtgcgccgtctcctgcactctcctactcttcagctggc
tctgctcgctccagtccagccgatgcccccgatgagaaggtgcaggccgtgcacagcctc
aagatgctctggcagagcacaccccaggcccccaggggcccccggaaactatgtcgaggt
gcaccgggaaccctgacatcaaaaagagatgtcctcagcctgctgaacttgtccccacgg
catggcaaggaggaaggtggggcagacaggctggaactgaaggagctgtctgtgcagcca
cgtgacgaggcgccacccaaagttcccaccaatggccactggtgcacggatacagcaaca
ctgacaacacccggcggccgcagcacgacagctgccactcgccctctgagacttcccttg
gccaatggttacaagttcctatccccaggaaggctcttcccttcctccaaatgttaa
DBGET
integrated database retrieval system
