Arvicanthis niloticus (African grass rat): 117697856
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Entry
117697856 CDS
T08817
Symbol
Pan3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117697856 (Pan3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117697856 (Pan3)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117697856 (Pan3)
mRNA degradation factors
3'-5' decay
Pan complex
117697856 (Pan3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
Pkinase
zf_CCCH_4
zf-CCCH_4
Torus
Motif
Other DBs
NCBI-GeneID:
117697856
NCBI-ProteinID:
XP_034345003
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MNSGGGLPPPSAAASPSSSSLAAAVAVAVAASSGVGSVPGGPAAGVKLKYCRYYAKDKTC
FYGEECQFLHEDPASCAVPGLGLHSNSVPLALAAASGAGFPPGALPGGGAGPPAGSKKPE
LGVPGAATAGGGLDGPRVAIPGMDGGALTDTSLTDSYFSTSFIGVNGFGSPVETKYPLMQ
RMTSSSSSPSLLSDSAKPYTGHDPLTSSASSLFNDFGALNISQRRKPRKYRLGMLEERLV
PMGSKARKAKNPIGCLADRCKSGVPINMVWWNRVTENNLQTPNPTASEFIPKGGSTSRLS
NVSQSNMSAFSQVFSHPSMGSPAAAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTP
NPASFMVPPSASTPANNPVPQTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIY
PPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHSLFP
LEPLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQ
HSNIVTLREVFTTKAFAEPSLVFAYDFHAGGETMMSRHFNDPNSDAYFTKRKWGQHDGPL
PRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILITSKTRLRVNCVGVFDV
LTFDNSQNNNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENVQKAMELVTINYSSD
LKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLL
AKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDA
GVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGNDRNSN
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggcggcggccttccgcctccctcggccgccgcctccccgtcgtcgtcctcg
ctggcggcggccgtggcggtcgcggtcgcggcctcgtcgggcgtcgggagcgtccccggc
ggcccggctgcgggcgtgaagctcaagtactgccgctactacgccaaggacaagacgtgc
ttctacggagaggagtgtcagttcctgcacgaggacccggcctcctgcgccgtcccgggg
ctcggcctccatagcaacagcgtcccgctggcgctggcggccgcgtcgggggccggcttt
cctcccggagcgctcccgggcgggggagcggggccgcccgcgggatccaagaagccggag
ctgggcgtcccgggggcggcgacagcgggcggcggactcgatggaccgcgggtggcgatt
cctggaatggatggaggtgctttaactgacacaagtctcacagattcctatttcagcacc
agctttattggagtcaatggatttggaagccctgtagaaacaaagtatcccttgatgcag
agaatgactagtagtagcagctccccaagccttctaagtgacagtgccaagccatacaca
ggccacgatcctctgacttcatctgcttcatccttgtttaatgacttcggtgccctcaac
atctcccagagaaggaagccaaggaagtatcgcctggggatgctggaggagaggctagtt
ccgatgggatcaaaggcacgaaaagcaaagaaccctattggctgccttgctgacaggtgt
aaatcaggagtacccatcaatatggtttggtggaacagagtcacagaaaacaatttacag
acaccaaatcctactgcaagcgaatttatacctaaaggaggatcaacctccaggctgagt
aacgtgtcccagtcaaatatgtctgccttctctcaagttttctctcacccatccatggga
agtcctgctgctgctggattagcaccaggaatgtcactatctgctggatcttcccctctc
cattcccccaaaattactccacacacctctcctgctcctagaagaagaagccacactcca
aacccagcaagtttcatggtgccgcctagtgcctccactcctgccaataatcctgttcct
cagactccgtcctctggtcaggtgatccagaaggagactgtcggggggacgacttacttc
tatacagatacgactccagcacctttgactggaatggtgtttccaaactatcatatttat
cctccaaccgcacctcatgttgcttacatgcaaccaaaagcaaatgcaccttccttcttt
atggccgacgagctccgacaggagctgatcaacagacatttaataacaatggctcagatt
gatcaagcagatatgccagcagtccccacagaagttgacagctaccatagcctgttccct
ctagaaccactgccaccccccaaccggatacagaaatcaagtaattttggatatatcaca
tcttgctacaaagctgtaaatagcaaagatgatctgccatattgccttcggaggatacat
ggttttcgtcttgttaacacaaagtgcatggtgttggttgatatgtggaaaaaaattcaa
cactcaaatattgtaactctgcgtgaagtgtttaccactaaagcatttgccgagccttct
ctcgtgttcgcctatgacttccatgctggaggagaaactatgatgagcagacactttaat
gacccgaattccgatgcctacttcacaaagagaaagtggggccagcatgacggaccactg
cccaggcagcatgctggattgttaccagagtctctcatctgggcatatattgtccagctg
agttctgctctgcgtaccattcatacagcaggtttagcatgtagagtaatggacccaacg
aagattctgataactagcaaaacaaggttacgagtaaattgtgtgggagtttttgatgtt
ttaacatttgataacagtcaaaataataatcctttggcattaatggctcagtaccagcaa
gcagatctgatatcattaggaaaagttgtgttggctttggcttgcaactctttggcagga
attcagcgagaaaatgtacagaaagccatggaattggtgacaatcaactactcctctgac
ctgaagaacctcatcttgtacttgttgactgaccaaaacagaatgcggagtgtgaatgac
atcatgcccatgattggtgctcggttttacactcagttggatgctgctcagatgagaaat
gatgttatcgaggaagaccttgctaaggaggtacaaaatggaagactgtttaggcttcta
gcaaaattgggaacaatcaacgagaggccggagtttcagaaggatccaacctggtcagag
actggagaccgatatctgttgaaactctttagggatcatctttttcatcaggtgacagaa
gcaggtgctccctggatcgacctcagtcacatcatttcttgtcttaacaagctagatgct
ggtgtgccagaaaaaataagcctgatttccagggacgagaagagcgtgctggtggtgacg
tacagtgacctgaaacgctgttttgaaaatacctttcaagaactgattgcggctgcaaat
ggtaacgatcggaacagtaactga
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