Arvicanthis niloticus (African grass rat): 117697865
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Entry
117697865 CDS
T08817
Symbol
Wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04136
Autophagy - other
anu04140
Autophagy - animal
anu05010
Alzheimer disease
anu05014
Amyotrophic lateral sclerosis
anu05016
Huntington disease
anu05017
Spinocerebellar ataxia
anu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117697865 (Wipi2)
04136 Autophagy - other
117697865 (Wipi2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
117697865 (Wipi2)
05014 Amyotrophic lateral sclerosis
117697865 (Wipi2)
05016 Huntington disease
117697865 (Wipi2)
05017 Spinocerebellar ataxia
117697865 (Wipi2)
05022 Pathways of neurodegeneration - multiple diseases
117697865 (Wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117697865 (Wipi2)
03029 Mitochondrial biogenesis [BR:
anu03029
]
117697865 (Wipi2)
Membrane trafficking [BR:
anu04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
117697865 (Wipi2)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117697865 (Wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
DUF7165
Beta-prop_TEP1_2nd
Beta-prop_RSE1_2nd
Beta-prop_Vps41
BCAS3_WD40
VID27
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
117697865
NCBI-ProteinID:
XP_034345026
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MNLASQSGEAGAGQLLFANFNQDNTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
DGMFLSASSNTETVHIFKLEAVREKPPEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICSLTTIQKIPRLLVGASDGYLYMYNLDPQEGGECALMRQHRLDGS
METTSEIVDSASHECPLATQTYGTAAAKGAYVPSSPTRLGKGQDANLEAYTDDLGAVGGT
CLEDEASALRLDEDSEHPPMILRTD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgagccagagcggagaggccggcgccggccagctgctgttcgccaacttc
aaccaggataacacgtccctagctgttggtagtaagtccgggtataagtttttctccctt
tcttctgtggataagctggaacagatctatgaatgcactgacactgaagatgtctgcatt
gtggagagattgttctcaagcagcttggtggccattgtcagcctcaaagctcccaggaag
ctgaaggtttgccactttaagaagggaaccgagatatgcaactatagctactccaacaca
atactggctgtgaagctgaacaggcagaggctcatcgtgtgtctggaagagtcgctctat
atacacaacatccgggacatgaaggtacttcataccattcgagagacacccccaaaccct
gcaggcttatgtgcactgtcaataaacaatgacaactgctacttggcgtatccagggagt
gcgaccattggagaggtgcaggtcttcgataccattaacttgagagctgcaaacatgatc
ccagctcatgacagtcccttagcagccctggcttttgatgcaagtgggaccaagcttgcc
actgcttctgagaagggaactgtgattcgggtgttttccattccagaaggacagaagctg
tttgagttcaggagaggagtgaagaggtgtgtgagcatctgctccctggccttcagcatg
gacggcatgttcctgtccgcatccagcaacactgaaacagtgcacatcttcaaactcgag
gctgtgagggagaaacctccagaagagcccaccacctggactggctactttgggaaggtt
ctcatggcatctaccagctacctgccctcacaagtgacagaaatgttcaaccagggcaga
gcttttgctaccgtccgcctgccattctgtggtcacaaaaacatctgctcactaaccaca
attcagaagatcccacggttgctggtaggagcatcagatggctatctgtacatgtacaac
ctggacccccaggaaggcggcgagtgtgccctgatgcgtcagcacaggcttgatggcagc
atggagacgaccagtgagattgtggactctgcgtctcatgagtgccccttagcaacgcag
acatacggcacagcagctgccaaaggtgcctatgtgccctcgtcccccacaagacttggt
aaaggacaggacgccaacctagaagcctacacagatgacctgggtgctgtgggtggcaca
tgcctagaggatgaagccagcgctctgcgcttggatgaagacagcgaacatcctcccatg
attctccggactgactga
DBGET
integrated database retrieval system
