Arvicanthis niloticus (African grass rat): 117697919
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Entry
117697919 CDS
T08817
Symbol
Smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04120
Ubiquitin mediated proteolysis
anu04137
Mitophagy - animal
anu04144
Endocytosis
anu04340
Hedgehog signaling pathway
anu04350
TGF-beta signaling pathway
anu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117697919 (Smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117697919 (Smurf1)
04350 TGF-beta signaling pathway
117697919 (Smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117697919 (Smurf1)
04137 Mitophagy - animal
117697919 (Smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
117697919 (Smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117697919 (Smurf1)
04121 Ubiquitin system [BR:
anu04121
]
117697919 (Smurf1)
03029 Mitochondrial biogenesis [BR:
anu03029
]
117697919 (Smurf1)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117697919 (Smurf1)
Membrane trafficking [BR:
anu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117697919 (Smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
117697919 (Smurf1)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
HECT type E3
117697919 (Smurf1)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117697919 (Smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
117697919
NCBI-ProteinID:
XP_034345134
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDTDAVRGQIVVSLQTRDRIGGGGSVVDCRGLLENEGTVYEDSGPGRPLSCLMEEPA
PYTDGTGAAAGGGNCRFVESPSQDQRLLVQRLRNPEVRGSLQTPQNRPHGHQSPELPEGY
EQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVD
HNNRTTQFTDPRLHHIMNHQCQLKEPSQPLQLPSEGSVEDEELPAQRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEDRRARLLQFVTGSTR
VPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccccgggacccgtaggaacggctccagcatcaagatccgtctgacagtattg
tgtgccaagaaccttgcaaagaaagacttcttcagactccctgaccccttcgccaagatt
gttgtggacggctcggggcagtgccactcaaccgacactgtgaaaaacaccctggaccca
aagtggaaccagcattatgacttgtatgttgggaaaactgactctataaccatcagtgtg
tggaaccacaagaagatccacaagaaacagggcgctggcttcctgggctgcgtgaggctg
ctctccaatgccatcagcagattgaaagatactggctaccagcgtttggatctatgcaaa
ctaaatccctcagatactgatgcagttcgtggccaaatagtggtcagtttacagacccga
gacagaataggcggtggagggtcagtggtggactgcagaggactgctggaaaacgaagga
acggtgtatgaagactcaggccccggaaggccgctcagctgcctcatggaggaacctgcc
ccatatacagatggtactggtgcagctgcaggaggtgggaactgcaggtttgtggagtct
ccaagccaagatcagagactcctggtacagcgactccgaaatcctgaggttcgagggtcc
ctacagacgccccagaaccgaccacatggccaccagtcaccggagctgcctgaaggatac
gagcaaaggacaacagtgcagggacaagtttactttttgcacactcagactggagtcagc
acatggcatgaccccaggatccccagagaccttaacagtgtgaactgcgatgaacttggg
ccgctgcctccaggctgggaagtcagaagcacagtgtcgggaagaatctattttgtagat
cacaataataggaccacccagtttacagatccgcggcttcaccacatcatgaatcaccag
tgccaactcaaggagcccagccagccgctgcagttgcccagtgagggctccgtggaggac
gaggagcttcctgcccagagatatgagagagacttagtccagaagcttaaagttcttagg
catgagctctctcttcagcagccccaagctggccactgtcgcatagaagtttccagagaa
gaaatatttgaggagtcttatcgccagatcatgaagatgcggccaaaagacctgaagaag
cgcctgatggtgaagttccgaggggaggaaggtttggactacggtggagtggctcgggag
tggctgtatttgttgtgccatgaaatgttgaatccatattatggactcttccagtattcc
acggacaatatttacacactgcaaatcaaccctgattcttctatcaaccctgaccatctg
tcttacttccactttgtgggtcgcatcatgggtctggctgtgttccacggacactacata
aatgggggcttcacggttccattctacaagcagctcctgggaaaacccatccagctgtcg
gacctggagtcagtggacccagaactgcacaagagcttggtgtggattctagagaacgac
atcacgccagtgctggatcataccttctgtgtggagcacaatgcttttgggcggattctt
cagcatgaactgaaacccaatggcagaaatgtgcccgtcactgaggagaacaagaaggaa
tatgtccggttgtatgtgaactggaggtttatgagaggaattgaagcccagttcttagcg
cttcagaaagggtttaacgaactcattccccaacacttactgaagccctttgaccagaag
gaactagagttgataataggtggactggataagatagacctgaatgactggaagtccaac
acacggctgaagcactgtgtggcagacagcaacatcgtcaggtggttctggcaggcggtg
gagacctttgatgaggacagaagagccagacttctgcagtttgtgacaggatccacaaga
gttcctctccaaggcttcaaggctctgcaaggctctacaggcgcggcagggccccgactg
ttcaccattcacctgatagacgccaacacagacaacctccccaaggcccatacctgcttt
aatcggatcgacatcccgccctatgagtcctatgagaagctctatgagaagctactgaca
gccgtggaggagacctgtggctttgccgtggagtga
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integrated database retrieval system
