Arvicanthis niloticus (African grass rat): 117697974
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Entry
117697974 CDS
T08817
Symbol
Pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03030
DNA replication
anu03410
Base excision repair
anu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117697974 (Pole)
03410 Base excision repair
117697974 (Pole)
03420 Nucleotide excision repair
117697974 (Pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anu03032
]
117697974 (Pole)
03400 DNA repair and recombination proteins [BR:
anu03400
]
117697974 (Pole)
Enzymes [BR:
anu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117697974 (Pole)
DNA replication proteins [BR:
anu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
117697974 (Pole)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
117697974 (Pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
117697974
NCBI-ProteinID:
XP_034345239
LinkDB
All DBs
Position
Unknown
AA seq
2278 aa
AA seq
DB search
MVLRNSGRRYPEPGADGEGSRDDGPSSSVSALKRLERSQWTDKMDLRFGFERLKEPGERI
GWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALPYKPYFYIAARKGCDREVSSFL
SKKFQGKIAKLENVPKEDLDLPNHLVGLKRSYIKLSFHTVEDLVKVRKEISPAVKKNREQ
DHASDEYTTMLSSILQGGSVITDEEETSKKMADQLDNIVDMREYDVPYHIRLSIDLRIHV
ALWYNVRFRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHIQETKPTIMV
TYNGDFFDWPFVEARAAIHGLSMYQEIGFQKDSQGEYKAPQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQELNKLTDDGHVLDAETYV
GGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPVEQATNFQEVC
EQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPG
ANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPSLFPEGPARAFHELSREEQAKYEK
RRLADYCRKAYKKIHMTKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAVEVGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTNVKKPKLTISYPGAMLNIM
VKEGFTNHQYQELTEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYSSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDIYKQKKISELFVLEGKRQVVMAQA
SENSLSLCTPDMEDIGLTKPYHSTVPVATKRKRVWESQKESQDVSLTVPWQEVLGQPPSL
GTTQEEWLVWLQFHKKKWQLQAQQRLARRKKQRLESTEDMPRLGAIREGPTSGLGSFLRR
TARSIMDLPWQIIQISETRQAGLFRLWALIGNDLHCIKLSIPRVFYVNQRVAKAEDGPSY
RKVNRALPRSNIVYNLYEYSVPEDMYQEHINEINTELSAPDIEGVYETQVPLLFRALVQL
GCVCVVNKQLARHLSGWEAEIFALEHLEMRSLAQFNYLEPGSIRHIYLYHHTQGHKALFG
VFIPSQRRASVFVLDTVRSNQMPGLSALYSAEHTLLLDKVGPNLLSPPKHTFEVRAETNL
KTICRAIQRFLLAYKEERRGPTLIAVQSSWELCRLTSEIPVLEEFPLVPVRVADKISYAV
LDWQRHGARRMIRHYLNLDICLSQAFEMSRYFHIPVGNLPEDISTFGSDLFFARHLQRHN
HLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINNSGCYSTVCVELDIQNLAVNTILQ
SHHVNDMEGAGSMGISFDVIQQASLEDMVTGNQAASALASYDETALCSSTFRILKSMVVG
WVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEFKRLGS
SVIYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLWMDPSN
YGGIKGKVPSSIHCGQQDSQAREETEDEEDKEKDEEEEDMGESEVEDLLENNWNILQFLP
QAASCQSYFLMIVSAYIVAVYQSMKDELRHSAPGSTPVKRKGPSQLSQEAEGAARGLPGM
ITFSQDYVANELTQSFFTITQKIQKKVTGSRNNTEPSEMFPVLPGSHLLLNNPALEFIKY
VCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCHSYVLPEVICHSCNFCRDL
DLCKDSSFSQDGTILPQWLCSNCQAPYDSNAIESALVEALQRKLMAFTLQDLVCLKCHGM
KETHMPVYCSCAGDFVLTIHTKVFMEQIRIFQNIAKYYSMSYLQETIEWLLQTSSVSN
NT seq
6837 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgaggaacagtggacggaggtaccccgagccgggcgcggacggcgaaggcagc
cgggatgatggtccctcttcctcagtctcagcactcaagcgtctggaacggagccagtgg
acagataagatggacttacggtttggttttgaaaggctgaaagagcctggagaaaggatt
ggctggcttatcaacatgcaccctactgagattttagatgaagacaaacgcttagtcagt
gcagtggattactacttcattcaagatgatggaagcagatttaaggtggccttgccctat
aagccatatttctacattgcagccagaaagggttgtgatcgagaagtttcatcatttcta
tccaagaagtttcagggtaaaattgcaaagttagagaatgttcccaaagaagatctggac
ttgccaaatcacttggtgggcttgaagcggagttacatcaagctgtccttccacactgtg
gaggaccttgtcaaagtaagaaaggagatctctcctgctgtgaagaagaaccgagaacag
gaccatgctagtgatgagtatacaacaatgctctccagtattctgcaaggaggcagtgta
attactgatgaggaggaaacctctaagaagatggctgaccaactggacaacatcgtggac
atgcgggagtatgatgttccctaccacattcgcctctccattgacctccgaatccatgtg
gccctctggtacaatgttagatttcgaggaaatgcttttcctgtggaaattacccgacga
gatgatcttgttgaacgacctgaccctgtggttttggcatttgacattgagacaaccaaa
ctgcctctcaaattccctgatgctgagacagaccagattatgatgatttcttatatgatt
gatggccagggctacctcatcactaacagggagattgtttcagaagatattgaagatttt
gagttcacccccaagccagaatatgaagggcctttttgtgtcttcaatgaacctgatgag
gtccatctgatccagagatggtttgagcatatccaggagaccaaacctaccattatggtc
acctacaatggggatttttttgactggccatttgtggaggctagggcagcaattcatggc
ctaagcatgtaccaggagataggcttccagaaggatagccagggggaatataaggcacca
caatgcattcacatggactgcctgaggtgggtgaagagggacagttaccttcctgtgggc
agtcataatctcaaggcagctgctaaggccaaacttggctatgaccctgtagagttggac
cctgaggacatgtgtcgtatggccactgaacaaccccagactctggctacttactcagtg
tcagatgctgttgctacctactacctgtacatgaaatatgtccatcccttcatattcgcc
ctgtgcaccattattcctatggaacctgatgaggtgctgcggaagggctctggaacattg
tgtgaagccttgctgatggtgcaagctttccatgccaacattgtcttccctaataagcaa
gagcaggagttgaacaagctcacagatgacggccacgtgctagatgccgagacctacgtg
gggggccacgtggaggccctagagtctggtgtcttccgaagtgacatcccctgccggttt
aggatgaatcctgcagcctttgattttctgctgcaacgagttgagaagactatgcgccac
gccattgaagaagaagagaaggtgcctgtggaacaagccaccaactttcaagaggtgtgt
gagcagattaagaccaagctcacctctctaaaagatgttcctaacagaattgaatgtcct
ctaatctaccatctagatgtgggggccatgtatcctaacataatccttaccaaccgcttg
cagccttctgccatagtggatgaggccacctgtgctgcctgtgacttcaataagcctgga
gcaaattgtcagaggaagatggcctggcaatggaggggagaattcatgccagcaagtcgc
agcgaataccatcgaatccagcatcagctggagtcggagaagttcccctctttgttccca
gaggggccagcacgggcctttcacgagctgtcccgtgaagaacaggctaaatatgagaag
cggaggttggcagattattgccggaaagcctataagaagatccatatgaccaaggtagaa
gagcgtctaactaccatctgccagagggaaaactcattttatgtggacacagtgcgggcc
ttcagagacaggcgctatgaattcaaaggactgcacaaggtgtggaagaagaagctctca
gcagctgtagaggtgggcgatgcatcagaggtgaagcgctgcaagaacatggagatcctg
tatgattcactgcagctggctcacaagtgcatcctgaactccttctacggctatgtcatg
cgcaaaggagctcgctggtattccatggagatggctggtatcgtctgctttacaggagcc
aacatcatcacccaagcaagagagctgattgagcagatcgggaggcctttagaactggac
acagacggaatatggtgcgtcctacccaatagttttcctgaaaattttgtcatcaagaca
accaatgtgaagaaacccaaactgaccatctcctatcctggtgccatgttgaacatcatg
gtcaaggaaggctttaccaaccaccaataccaagagctaacagagccttcgtctctcacc
tatgtcacccgctcggagaacagcatcttttttgaagtcgatggaccataccttgctatg
atccttccagcctccaaggaagaaggcaagaaactaaaaaagagatatgctgtattcaat
gaagatggttccttagctgaactgaaaggttttgaggtgaaacgccgaggggagttgcag
ctgattaaaatcttccagtcctcagtttttgaggccttcctcaagggcagcacactggag
gaggtgtatagctctgtggccaaagtggctgactactggctagatgtgctctatagcaag
gctgctaatatgcctgattctgaattgtttgagctgatttctgagaaccgctccatgtct
cggaagctagaagattatggggagcagaagtctacgtccatcagcacagcaaagcgcctg
gctgagttcctgggagaccagatggtcaaagatgctggactgagctgccgctatatcatc
tcccgaaagccagaggggtctcctgtcactgagagggccattccacttgccattttccaa
gcagagcctacagtgaggaaacattttctccggaaatggctaaagagttcatcacttcaa
gactttgatattcggacaattctggactgggactattacatagagcggctgggaagtgcc
atccagaaaatcatcaccatccccgcagctctgcagcaggtgaagaacccagttccacgt
gtcaaacatccagactggctacacaaaaaactactagagaagaatgatatctacaagcag
aagaagatcagtgagctctttgtacttgaaggaaagagacaggttgtgatggcccaggct
tcagaaaacagtctgagtctctgcactccagacatggaggacattggactcacaaagcca
taccactctacagtcccagttgctactaagaggaagagagtctgggagagccaaaaggag
tctcaggatgtttcactaactgtgccctggcaagaggtcttagggcagcctccctccctt
ggaaccacacaggaagagtggttggtctggctccagttccacaagaaaaagtggcagctg
caggcccaacagcgcctagcccgcaggaagaagcaacgcttagagtcaacagaagatatg
ccaaggcttggagctatccgagagggacctacctcaggactggggagctttttgcgacgg
accgcccgcagcattatggaccttccatggcagataatacagatcagtgagaccagacag
gctggtctgttccgactgtgggctctcatcggcaatgatttgcactgcatcaagctgagt
atccctcgagtattctatgtaaaccagcgggtagccaaagcagaggatgggccttcatat
cgaaaggtgaatcgggctcttcctcgatccaacattgtctacaatctttatgagtattca
gtaccagaggacatgtaccaagaacacatcaacgagatcaacactgagttgtcagcacca
gacattgaaggcgtgtatgagactcaggtcccattgttattccgggcccttgtgcagctg
ggctgtgtatgtgtggtcaacaaacagctggcaaggcacctttcaggctgggaagctgaa
atctttgccctcgagcaccttgaaatgcgttctctggcccagttcaactacttggaacca
gggagtatccgacacatctacctgtaccatcacacacagggccacaaggcactctttggg
gtctttatcccctcacagcgaagagcatctgtgtttgtgttggatactgtgcgaagcaac
caaatgccagggctcagtgccctgtactcagcagaacacaccctgctgctggacaaagtg
ggccccaacctcctgtctcccccaaaacacacctttgaagttcgtgctgaaaccaacctg
aagaccatctgtagagccatccagcgcttcctgcttgcctacaaggaagagcgccggggg
cccacactcatcgctgtccagtctagctgggagctgtgtaggctgaccagtgagattcca
gtcttagaagagttcccactggtgcccgtccgagtggctgacaagatcagctatgcagtt
ctggactggcagcgccatggagctcgccgaatgatccggcactacctcaatttagacatt
tgcctttcacaggcctttgagatgagcaggtacttccacatccccgttggaaacctgcca
gaagacatctccacctttggctctgacctcttttttgcacgccacctccagcgccataac
cacctgctttggctgtcccctacctctcggcctgacctgggtgggaaggaagctgatgat
aaccgccttgtcatggagtttgatgaccgagccactgtagagatcaataattctggctgt
tactccactgtgtgcgtggagctggacattcagaatctggcagtcaacaccatcctccag
tcccaccacgtcaatgacatggaaggggctggcagcatgggtatcagcttcgatgtgatc
caacaggcctccctagaggacatggttacaggcaatcaagctgccagtgccctagccagc
tatgatgagacagccctctgctctagtaccttcaggatcctgaagagcatggtggttggc
tgggtaaaggaaatcacacagtaccacaacatctatgctgacaaccaggtaatgcacttc
taccgctggctccagtcgccatgctctctgctccacgacccagcccttcaccgaacactg
cacaatatgatgaagaagctctttctgcagctcattgctgagttcaagcgcctggggtca
tcagtcatctatgccaacttcaatcgcatcatcctttgtacaaagaagcgccggatagag
gatgcccttgcctatgtggaatatatcaccaacagcatccattctaaagagatctttcat
tccctgacaatctctttctctcgatgctgggaattccttctctggatggacccatccaac
tatggtggaatcaaaggaaaagttccatctagtattcactgtggacagcaagactcccag
gcaagggaggaaactgaggacgaggaggacaaggaaaaggacgaggaggaagaggacatg
ggggaatctgaggttgaggacctactggagaacaactggaacattctacagttcttgcca
caggcagcctcttgccagagctacttcctcatgattgtttcagcgtacattgtagctgtg
taccaaagcatgaaagatgagctgagacacagtgcccccggcagcacccctgtgaagagg
aaggggcccagccagttatcccaggaagctgaaggggcagctagaggccttcctggaatg
atcactttctctcaagactatgtggcaaatgagctcactcagagcttcttcaccattact
cagaaaattcagaagaaagtcacaggttctaggaacaacactgagccttcagagatgttc
cctgtcctccctggttcacacttgctgctcaataatcctgctctggagttcatcaaatat
gtgtgcaaggtactgtctctggatacaaacattacaaatcaggtgaataagctaaacaga
gacctacttcgcctggtagacgttggtgaattctctgaggaggcccagttcagagacccc
tgccactcctatgtgctccctgaagtaatctgccacagctgtaatttctgccgagacctg
gacctgtgcaaagattcctctttctctcaggatggaaccatcctgcctcagtggctctgc
tccaattgtcaagccccctacgactcaaatgccattgagtcagccttggtggaagcccta
cagaggaaactgatggccttcacacttcaggacctggtatgcctcaagtgccatggtatg
aaagagacccatatgcctgtgtactgcagctgcgcaggggactttgttctcaccatccac
actaaggttttcatggaacagattagaatcttccagaacattgccaagtactacagcatg
tcatatctccaggagaccatagaatggctgctacagacaagctctgtatcaaactga
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integrated database retrieval system
