Arvicanthis niloticus (African grass rat): 117698086
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Entry
117698086 CDS
T08817
Symbol
Tnrc18
Name
(RefSeq) trinucleotide repeat-containing gene 18 protein isoform X1
Organism
anu
Arvicanthis niloticus (African grass rat)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_TNRC18
BAHCC1-like_Tudor
BAH
Tudor_3
DUF4537
Motif
Other DBs
NCBI-GeneID:
117698086
NCBI-ProteinID:
XP_034345384
LinkDB
All DBs
Position
Unknown
AA seq
2955 aa
AA seq
DB search
MDGRDFGPQRSVHGPPPPLLSGLAMDSHRVGAATAGRLPSSGLPGPPPPGKYMAGLNLHP
HPGEAFLGSFVSSGMGPSASSQGSPVSLPSDLSFRSPTPSNLPMVQLWAAHAHEGFSHLP
SGLYPSYLHLNHLESPSSGSPLLSQLGQPSIFDTQKDGFYLPAPGTLHAHTPSSRTPSGH
SSGGSAKSSSREGTGKDRSGRGGDPPPLFGKKDPRAREEVSGPRGVVDLTQEARAEGRQD
RGSSRLAERLSPFLAEAKAKGALQPSALSLCNGVVDAGLVAELGRGGAKEVARQEENARL
LRRAEALLPAARPCGSPLPPPPPLPPKGPPAPPSSTPAGVYTVFREPGREHRVVAPTFVP
SVEAFDERVGPIQIASQARDVRAREREPGRPGVLQGPPGSPRLERPEVLREKSSVIRSLK
RPPPSDGPPAARSSRSSPDARAYLPPKELLKPEADPRPCERAPRGPSTSAAQQAAKLFGL
EPSRPPGPEHKWKPFELGNFATTQMAVLAAQHHHASRAEEEAAVATASKKAYLDPGGAMP
RASATCGRPGADLHSAAHGPGEASAMQSLIKYSGSFAREAVAVRPGGCGKKSPFGGLGTM
KPEPTPTSAAPPRAQARLSHPGVPTAGGGRQLKRDPERPESAKAFGRENSGAQGEAEVRH
PPVGIAVAVARQKDSGSNSRLGPGLVDQERSLSLNNVKGHSRTDDDCDGARHREDRLLGT
RLDRDQEKLLRESKELADLARLHPTNCAPNGLNPNLMVTGGPTLAGSGRWSADPAAHLAT
HPWLPRSGSTSMWLAGHPYGLGPPSLHQGMAPAFPPGLGGSLPSAYQFVRDPQSGQLVVI
PSDHLPHFAELMERAAVPPLWPALYPPGRSPLHHAQQLQLFSQQHFLRQQELLYLQQQAA
QALELQRSAQLVQERLKAQEHRTEMEEKISKRSLETTGKAGLSAAGPGLLPRKSSGLATG
PTGTHGKAMSPPPSPRASPVTSLKAKVIQKVEDVSKPPAYTYPATPSSHPSSPPPASPPP
TPGLTRKEEAPENVVEKKDLELEKEAPSPFQALFTDIPPRYPFQALPPHYGRPYPFLLQP
TAAADADGLAPDVPLPADGPERLALSPEDKPICLSPSKIPEPPRDSPEEEPLADREVKAE
VEDIEEGSTELPPLESPLALPVPETMVSVSPAGGCGGSPLEAQALSAAGPGCREPSEASD
FAQVVEPQIELPSRTEPRMAALELGTQLTPEPLVETKEEPVEVPLDVPMEEPMAEAGPED
SLPQPSLTEPQPSLEHSDCDLPVPEGQCLNLEAQEAAPAPASTCYLEETHSGSLLPVLDD
PLAGMNALAAAAELPQARPLPSLGTGVPAGEKLDAAPSVVLEHSFLQGITLLSEIAELEL
DRRGQEVADPEPNLVVRPSLESLLAASSHMLKEVLESPFSDPLKNLRLPRELSSNKKYSW
MQKKEERMFAMKSSWEDMDALELDFRMRLAEVQRRYKEKQRELVKLQRRRDSGDRHEDAH
RSLARRGPGRPRKRTHTPSALSPPCKRGKSHCGSGKLSSKSLLTSEDYDLGAGIRKRHKG
PEEEQEALIGMGKARGKNQSWDDHESSSDFMSQLKIKKKKMASDQEQLASKLDRALSLTK
QDKLKSPFKFSDSPGGKPKTGGGCGRFLTQYDSLLGKDRKALAKGLGLSLKPPREGKHKR
ASKARKMEGGFKARGQPKSVHSPFASEVSSQSYNTDSDEDEDFLKNEWSAQGPSSSKLTS
SLLCGMVPKNSKPATGPKLTKRGLAGPRTLKPKVATSRKQSFCLLLREAEARSSFSDSSE
EDSFDQDDSSEEEEEELEEEEEEEEDEDEEGVGSYRLGAGEQALSPSLEESGLGLLARFA
ASALPSPVVGPPLSVVQLEAEQKARKKEERQSLMGTEFEYTDSESEVKVPKQSPAGLLRP
KKGVGEPGQSLAAPVPGTRASGPTSPDKAKLASEKGRKARKIRGPKEPGFEAGPEASDDD
LWTRRRSERIFLHDASAAVQAPSNTVPATKPSRCGRGGAPSPRKDTGRAKDRKDPRKKKK
GKEAGSAATLPPPRVSTLTDSRAPHPGALATAKRSKAKARGKEAKKENRGKGGAVSKLME
CMAAEEDFEPNQDSSFSEDEHLPRGGATERPLTPAPRSCIIDKEELKDGLRVLIPMDDKL
LYAGHVQTVHSPDIYRVVVEGERGNRPHIYCLEQLLQEAIIDVRPASTRFLPQGTRIAAY
WSQQYRCLYPGTVVRGLLDLEDDGDLITVEFDDGDTGRIPLSHIRLLPPDYKIQCAEPSP
ALLVPSAKRRSRKTSKDTGEVKEGAATGPQEATGGKPRGRGRKPSTKAKADRAVVLEEGA
ATNEVPSAPLALDPVSTPISKKSTPEPVDKRARAPKARSVSAQPSPVPPTFSSCPAPESF
GELPTPATTPLVTMPVTMPATRPKPKKARAAEGSGAKGPRRPGEDDELLVKLDHEGVMSP
KSKKAKEALLLREDPGPGGWPESTGLLSLGSYSPAVGNSDPKGTWPKGLDGDLTQEPGPG
LSLEDPGNSKSPDKAQAEQDGAEESETTSSSSSSSSSSSSSSSSSSSSSSSGSETEGEED
AEKNREDSRGAGGRTCSAASSRASSPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPAAGPSTQPALPTKVSKPPSKARSSAHSP
GKKAPPTTQPPPQPPPQPQQTLQPKTQAGAGPKSRPKKREGVHLPTTKELAKRQRLPSVE
NRPKIAAFLPARQLWKWFGKPTQRRGMKGKARKLFYKAIVRGKEMIRIGDCAVFLSAGRP
NLPYIGRIQSMWESWGNNMVVRVKWFYHPEETSPGKQFHEGQHWDQKSGHSLPAALRASS
QRKDFMERALYQSSHVDENDVQTVSHKCLVVGLEQYEQMLKTKKYQDSEGLYYLAGTYEP
TTGMIFSTDGVPVLC
NT seq
8868 nt
NT seq
+upstream
nt +downstream
nt
atggatggccgagatttcggtccccagcggtccgtccacggccccccgccgccgctgctg
tccggcctggccatggacagccaccgcgtgggcgcggccaccgccggacgcttgccctct
tcgggcttgccaggtcccccgccgcctgggaaatacatggccggtctcaacctacacccg
cacccgggcgaggccttcttgggcagctttgtgtccagcgggatggggccctcggcctcg
tctcaggggagcccggtatccttgccctctgacctctccttccgctcccccacccccagc
aacctgcccatggtgcagctgtgggctgcccacgcccatgaaggcttctcgcacctgccc
agtggcctgtacccatcctacctccacctgaaccacctggagtcccccagcagcgggagc
cccctcctcagccagctgggtcagcccagcatcttcgatacccagaaagatggtttctac
ctgcccgcaccggggaccctgcatgctcacacgccctcgtccagaactcccagtggccac
tcctcaggcggttcagccaaaagctcttcccgggaaggtacagggaaggatcgctcaggc
cgtggtggagaccctcctccgttgtttggcaagaaagaccctcgggcacgtgaggaggtg
tccgggccccgaggtgtggtggacttgacccaggaagcccgagctgagggccgccaggac
cgaggatcctcacgcctggctgaacgcctgtctccctttttggcagaggccaaagccaag
ggtgcactgcagccatcggccttgagcttgtgcaatggtgtggtggatgcggggctggtg
gctgagttgggccgcggaggtgccaaggaggtagccaggcaggaggagaatgctcggctg
ctgcggagagctgaggccctgctgcccgctgcaaggccctgtgggtccccactaccaccg
ccaccaccactgccccccaagggtccccctgcacccccttcctcgacaccagccggtgtc
tacaccgtgttccgtgaaccaggccgtgagcaccgcgtggtggcacccacctttgtgcct
tctgtggaggcctttgatgagcgtgtgggacccatccagatagcatcccaggctcgcgat
gtccgggccagggaacgtgagccaggccgtcctggggtcctgcaaggtccacctggatct
ccacgactggagcgaccagaggtcctgcgggagaaaagttcggtcatccgctccctcaag
cgtccgcctccgtcggatggacctccagcagctcgctcctcccgctcctccccggatgcc
cgagcctacctgccccctaaggaactactcaagcccgaggctgatccgaggccttgcgag
cgcgcaccccgaggcccaagcacttctgctgcccagcaggctgctaagctcttcggcctg
gaaccgtcccgaccacctgggccggaacacaagtggaaaccctttgagctgggcaacttc
gccactacgcaaatggctgtcctggcagcccagcaccaccatgccagccgagccgaagag
gaagcagctgttgccacagcatccaaaaaggcctacctggaccccgggggcgcaatgccc
cgtgcctcggccacctgcggcaggcccggtgctgacctccactccgcagctcacggtccc
ggagaggcctccgctatgcagagcctcatcaaatacagtggcagctttgctcgggaggcg
gtggcagtgcgccccggtggctgcgggaagaagagcccctttggaggcctgggtactatg
aaacctgaacctacacccacatctgcggctccccctagagcccaggcccgactctcacac
cccggggtccctacagccggtgggggccggcagctgaaacgggacccggagagacctgag
agtgccaaggcctttgggcgagagaactctggtgcccagggggaagccgaagtaagacac
ccgcccgttggcattgccgtggctgtggcccggcagaaggacagtgggagcaatagccgg
ctggggcctgggctggtagaccaggaacgttctttgtcactgaacaatgtcaaagggcat
agccggactgacgatgactgtgatggagccaggcaccgggaggatcggctgctagggaca
cggctggaccgggaccaggagaagttgctccgagaaagtaaggagctggctgatttggcc
cgtctacaccccaccaactgtgctcccaacggtctgaaccccaacctcatggtgactggt
ggcccaacgctggcaggctcaggacgctggtctgctgatcccgcagctcacttggccaca
cacccctggctgcctcgctcgggtagcacatctatgtggcttgccggacacccttacggc
ctgggacccccctctctgcaccagggcatggcccccgcgttcccacctggcttagggggg
tccttgccatcagcttaccagttcgtcagggacccccagtctggccagctggtggttatc
cctagtgatcacctgcctcattttgctgaactgatggagcgggcagcagtgcctcccctc
tggccggccctgtacccgccaggccgcagccccctgcaccacgcccagcagctgcagctc
ttttctcagcagcactttttaagacagcaagagctgctctacctgcaacagcaggcagcc
caggccctggagctgcagcggagcgcacagctggtgcaggagcggctgaaagcacaagag
catcggaccgagatggaggagaagataagtaagaggagcctggagaccacgggcaaggcc
ggcctgagtgctgcaggccctgggcttctgcctcgcaagtcttccggcctggctaccggc
ccgacaggcacccacggcaaggccatgagcccacccccctctccccgagcctcccctgtg
acctctctgaaggccaaggtcatccagaaggtggaggatgtgtctaagcctccagcctat
acctaccccgccacacctagctcgcaccccagcagcccaccgcctgcctccccacctcct
acccctgggctcacccgcaaagaagaggctcctgagaatgtggtggagaagaaagacctg
gagttggagaaggaagcgcccagcccgttccaggccctgttcacagatatccctcccagg
tatccattccaagccctgcccccacactacgggcgaccctaccccttcctgctgcaaccc
accgcggctgctgatgccgatggccttgccccagatgtaccactcccggctgatgggccc
gagcgcctggcactgtctcctgaagacaagcccatctgcctgtcaccctctaagatccca
gagccacctcgggacagcccagaggaggagccgctggccgaccgggaggtgaaggctgaa
gttgaggatatcgaagagggctccacagagctgcctccccttgagtcaccattggccctg
cccgtcccagagaccatggtgtctgtgagccctgctggtggctgcggcggtagtcctcta
gaggcacaggcattgagcgcagcaggtccaggctgccgggagccctctgaagcgtcagac
tttgcacaggttgttgaaccacagatagaactaccgagtaggacagagccccgcatggct
gccctggagctggggacacagctgacacctgagccgctggtggagactaaggaagagcca
gtggaagtgcccctggatgtgccaatggaggagcccatggcagaggcagggcctgaggac
agtctgcctcagccatccttgactgagcctcagcccagccttgaacactcagactgtgat
ttgcctgtcccagagggccagtgtctcaacctggaggcccaggaggctgcacctgctcct
gccagtacctgctatctagaagagacccactctggatcactcctgcctgtcctggatgac
ccactggctggcatgaatgcactggcagctgcagcagagctgccccaggccaggcctctg
ccctccctgggtactggagtcccagcgggggagaagctggatgcagcccccagcgtagtc
ctggaacacagcttcctgcagggcatcaccctcctgagtgagatagctgagctggagctg
gaccgcaggggccaggaggttgcagatccagagccaaacctagtcgtgaggccctccctg
gaaagcctgctggcggccagcagccacatgttgaaggaggtgctggagagccctttctcg
gacccactcaagaacttgcggcttccacgagaactgagctccaacaagaagtatagctgg
atgcagaagaaagaggagcggatgttcgctatgaagtcttcctgggaggacatggatgcg
ctcgagttggacttccggatgcgactggcagaagtccaacgacggtacaaagagaaacag
cgggagctggtcaagctccagagacgccgggactcgggggacaggcacgaagatgcccat
agaagcctggcacgcagaggccctggcaggccgaggaaacggacccacaccccgagcgcc
ctgtcgcccccctgcaagagagggaagagccactgcggtagcggaaagctaagcagcaag
tccttgctgacatcagaggactatgatctgggagcagggataaggaagagacacaagggg
cctgaggaggagcaagaggccctcatcggcatggggaaagcccggggcaagaaccagagc
tgggacgatcacgaatcctcgtccgattttatgagtcagctaaagattaagaagaaaaag
atggcgagtgaccaggagcagttggcaagcaagctagacagagccctttccctcacaaag
caagacaagctgaagtcaccattcaagttttccgacagccctggggggaaaccgaaaacc
ggtgggggctgtggcaggttcttgacacagtatgacagcctgctgggcaaggacaggaaa
gcgctggccaaaggactcggcttgtctctgaaacctcccagagaaggtaaacacaaaaga
gcttccaaagccaggaagatggaggggggcttcaaggccagaggccagcccaagtctgtc
cattctccatttgcctcggaagtaagcagtcagtcttacaatacggactcagatgaggat
gaagacttcctgaagaatgagtggtctgcccagggcccctccagctccaaactgacctcg
tccctcctgtgtggcatggtgcccaagaacagcaagccagccacaggccctaagctgacc
aagaggggcctggcaggcccccggactttgaaacccaaggtggccaccagcaggaagcag
tcgttctgtttgctgctccgagaggccgaggcccgctcctccttcagcgactcttccgag
gaggactcctttgatcaagatgacagctcagaagaggaggaggaagagctagaggaggag
gaggaggaggaggaagacgaggacgaggaaggcgttggtagctataggctgggtgccggg
gaacaggccctgtcgccaagcctggaggagagtgggctgggcctgctggctcgctttgcg
gccagtgctctccccagccctgtcgttgggccacccctgtctgtggtgcagctggaagct
gagcagaaggcccggaagaaggaagaacggcagagcttgatgggcacagagttcgagtat
acagactcagagagtgaagtgaaggttcccaagcagtcacctgctgggctgctgcggccc
aagaaaggggtcggggagccaggccagtctctggctgcacctgtacctggcacccgggcc
tctggtcccaccagcccagacaaggccaagctggcctcagagaaaggacgcaaagcccgg
aagatacgtggccccaaggaacctggctttgaggcgggaccagaggccagtgacgatgac
ctgtggacacgacgcaggagtgagcgaatcttcttacacgatgcctccgccgcagtccag
gcacccagcaacacggtgccagcaaccaagcctagccgctgtggcaggggtggtgcccca
agtccacggaaggacaccggccgagccaaggacaggaaggaccccaggaagaagaagaaa
gggaaagaggctgggtcagcagccacgctgccaccaccccgtgtttccaccctgactgac
tccagggcaccccacccaggggccctggcaactgccaaacgtagcaaggccaaggccaga
gggaaggaagcaaagaaggagaaccgaggaaaagggggagccgtgagtaagttgatggag
tgcatggcggcagaggaagactttgaacccaaccaggattcaagcttctccgaggacgag
cacttaccccgtggtggggccacagagagacctttgaccccagctccccgctcctgcatc
attgataaggaggagctgaaggatggcctgcgtgtgctcatccccatggacgacaagctg
ctttacgcgggccacgtgcagaccgtgcattcacccgacatataccgtgtggtggtggaa
ggtgagcgtgggaaccgtccccacatctactgcctggagcagctactgcaggaggcgatt
atagatgtgaggccggcctctacacgcttcctgccccaggggaccaggatcgccgcctac
tggagccaacaataccgctgcctgtatccaggcacggtggtccgagggctgctggacctg
gaagatgacggagacttgatcaccgtggagtttgatgacggagacacaggcaggatccct
ctctcacacatccgcctcctgccgcctgactataaaatccaatgtgctgagccatcccca
gcactcttagtgcccagtgcaaaacgtcgtagcaggaagaccagcaaagacacaggggaa
gtcaaagaaggggctgccacgggacctcaggaggctacagggggcaagcctcgagggcga
ggacggaaaccaagcaccaaagccaaggctgacagagctgttgtcctggaggaaggggct
gccaccaatgaggttcccagtgctcccttggccctggaccccgtcagcactccaatttct
aagaagagtaccccagaaccagtggacaagcgggccagagcccccaaagcacgctcagtc
tctgcacagcccagccccgtaccacccaccttctctagctgcccagctcctgaatccttt
ggagagcttccaacccccgctacaaccccacttgtcaccatgcctgtcaccatgcctgcc
actcgccccaaacccaagaaggctcgggccgccgaggggtcaggtgccaaaggtccccgg
aggccaggggaagatgatgaactgcttgtcaaactggaccacgagggggtcatgtctccc
aaaagcaagaaggccaaagaggccctccttctgcgggaagatccagggcccgggggttgg
ccagagtccacagggttgctcagcctgggcagctactccccagcagttggcaacagtgat
cccaagggcacctggcccaagggtctagatggagaccttactcaggagcccgggccaggg
ctttctttagaagatcctggcaactccaaaagcccagacaaagcccaggctgaacaagat
ggggcagaggagtcagagaccacttccagcagcagcagcagcagcagtagcagcagcagc
agcagtagcagcagcagcagcagtagcagcagtggttcggagacagaaggcgaggaggat
gctgagaagaacagggaggacagccggggtgcagggggccggacctgcagtgctgctagc
tccagggcctcttctcctgcctcctcctcctcttcttcctcctcttcatcctcctcttcc
tcctcttcctcttcttcttcctcttcctcctcctcttcctcttcctcatcttcttcctct
tcttcttcctcttcttcctcttcctcctcctcttcctcttccacgacagacgaggactct
tcttgcagctctgatgacgaagcagcccctgcacccgcagctggtccctccacacagcca
gcactccccaccaaggtatccaagccacctagcaaggcacgctcctcggctcactcccca
ggcaagaaggcaccccccaccacccagccaccgccccagcccccaccccagccccagcag
actcttcagcccaagacccaggctggggctgggcccaagagccgacccaagaagagagaa
ggcgtacacctgcctaccaccaaggagctggccaagcggcagcgtctgccatctgtggag
aacagacccaagattgctgccttcctacctgcccggcagctttggaagtggtttggcaaa
cccacccagcgacgaggcatgaagggcaaggcccgcaagctgttctacaaggccatcgtc
agaggcaaggagatgatccgaatcggcgactgtgcggtgttcctgtcagctggccgcccc
aacctgccctatattggccggatccagagcatgtgggaatcatggggcaacaatatggtt
gttcgtgttaagtggttctaccatccagaggagaccagcccgggcaagcagttccatgag
ggccagcactgggaccagaagtcggggcatagcctccctgcagccctgcgggcctccagc
cagaggaaggacttcatggagcgtgccctgtaccagtcctcccatgtggatgagaacgat
gttcagacagtgtcccacaagtgcctggtggtgggcctggagcagtatgaacagatgcta
aagaccaagaaataccaggacagcgaggggctctactacctcgcaggcacctacgagccc
accacaggcatgatcttttccacagacggcgtgcctgtgctctgctga
DBGET
integrated database retrieval system
