Arvicanthis niloticus (African grass rat): 117698259
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Entry
117698259 CDS
T08817
Symbol
Pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03430
Mismatch repair
anu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117698259 (Pms2)
03460 Fanconi anemia pathway
117698259 (Pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anu03400
]
117698259 (Pms2)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
117698259 (Pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Kazal_C6
Motif
Other DBs
NCBI-GeneID:
117698259
NCBI-ProteinID:
XP_034345651
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MEQTEGASTERAKAIKPIDGKSVHQICSGQVVLSLSTAVKELIENSIDAGATSIDLRLKD
YGVDLIEVSDNGCGVEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDV
TISTCHASASIGTRLVFDHDGKITQKTPYPRPKGTTVSVQHLFYTLPVRHKEFQRNIKKE
YAKMVQVLQAYCIISAGVRVSCTNQLGQGKRQPVVCTSGSSAVKENIGSVFGQKQLQSLI
PFAQLPPSDAVCEEYGLSASRAPQNPFHISGFISQCTHGAGRSATDRQFFFINQRPCDPA
KVSKLVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQDEKLLLAVLKTSLI
GMFDGDANKLNVNQQPLLDVEGNLVKLHTTEIEKPVSGKQGNSPLLKITANEKRVVSISR
LREAFSLHPTTEIKARGPETPELKQSFPSQKRGVSSSYPSDVVSYRGLHGSQDKLVSPTN
SPVDCMDREKREKDPGISSTSAGSEEGFSTPEVASSFSSDYNVSSPEDRPSQENIDCGEM
DYHLSGTGHHLKPEDSGYKCRPLPPPTHLSPSNAKRFKPEERPSNTDIPQKLLDPQNTSA
AEVDVAVKINKKVVLLDFSMNSLAKRMKQLQHLKLQNKSEQNYRKFRAKICPGENQAAED
ELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQR
LITPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQD
IDELIFMLSDSPGVLCRPSRVRQMFASRACRKSVMIGTALNMSEMKKLITHMGEMDHPWN
CPHGRPTMRHIANLDIISQN
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaactgaaggcgcgagtacagaacgtgctaaagccatcaagcctattgatggg
aagtcagtccatcaaatttgttctgggcaggtggtactcagtttaagcaccgcagtgaag
gagttgatagaaaatagtatagatgctggtgctactagtattgatctaaggcttaaagac
tatggggtggacctcattgaagtttcagacaatggatgtggggtagaagaagaaaacttt
gaaggtctagctctgaaacatcacacatctaagattcaagagtttgctgaccttacacag
gttgaaacttttggctttcggggggaagctctgagctctctgtgtgcactgagtgatgtc
actatatctacctgccatgcatctgcaagcattgggactcgactggtatttgaccatgat
gggaaaatcactcagaaaactccctacccccgacctaaaggaaccacagtcagtgtgcaa
cacctattttatacactaccagtgcgtcacaaagagtttcaaaggaacattaaaaaggag
tatgccaaaatggtccaggtcttgcaggcatactgtatcatttcagcaggcgtccgtgta
agttgcactaatcaactaggacaggggaagcggcaacccgtggtgtgcacaagcggaagc
tctgccgtgaaggaaaatattgggtctgtgtttggccagaagcagttgcaaagcctcatt
ccctttgctcagctgccccctagtgacgctgtctgtgaggagtacggcctgagcgcttcc
agggctccacagaatcctttccacatttcgggcttcatctcacagtgcacacacggggcc
gggaggagtgcaacagacagacagtttttcttcatcaatcaacggccttgtgacccagca
aaggtctctaaacttgtaaatgaggtttatcacatgtataatcggcatcagtatccattt
gttgttcttaatgtttctgttgattcagaatgtgtcgatattaacgtaactccagataaa
aggcaaattttactacaggatgaaaagcttttgctggcagttttaaagacgtccttgata
ggaatgttcgacggtgatgcaaacaagcttaatgtcaaccagcagcccctgctggatgtc
gaaggtaacttagtaaagctgcataccacagaaatagaaaaacctgtgtcaggaaagcaa
ggtaactctcctttgttgaagatcacagcaaacgaaaaaagagtggtatccatctccagg
ctgagagaggccttttctcttcatcctaccacagagatcaaggctaggggcccagagact
cctgaactgaaacagagttttccaagtcagaaaaggggtgtgtcatcttcttatccttca
gacgtcgtctcttatagaggcctgcatggctcgcaggacaaattggtgagtcccacgaac
agccctgttgactgtatggacagagaaaaaagagaaaaagacccagggatcagcagcacc
tcagctggctctgaggaagggttcagcaccccagaagtggccagtagctttagcagtgac
tataacgtgagctccccagaagacagaccttctcaggaaaacatagactgtggtgaaatg
gactaccatctttcagggacaggacaccatttaaagccggaagatagcggatataaatgt
agacctttacctccaccaactcatctctcaccctcaaatgctaaacgtttcaagccagaa
gaaaggccttcaaatactgacattcctcaaaaactgcttgatcctcagaacacctcagca
gctgaggttgatgtagccgtaaaaattaataagaaagtggtgctccttgacttctctatg
aactctttagctaaacggatgaagcagttacagcacctaaaactgcagaacaaaagtgaa
cagaattacaggaaatttagggccaagatttgccctggagaaaatcaagcagcagaagat
gaactcagaaaagagattagtaagtcgatgtttgcggagatggagatcctgggtcagttt
aacctgggttttatagtcaccaaactgaaagaggacctcttcctggtggaccagcacgct
gcggacgaaaagtacaactttgagatgctgcagcagcacactgtgctccaggcgcagagg
ctcatcacaccccagactctgaacttaactgctgtcaatgaagctgtgctgatagaaaat
ctggaaatattcagaaagaacggctttgactttgtcattgatgaggatgctccagtcact
gaaagggctaaattgatttccttaccaactagtaaaaactggacctttggacctcaagat
atagatgaactgatctttatgctaagtgacagccctggtgtcctgtgtcggccctcaaga
gtcagacagatgtttgcttccagagcctgtcggaagtctgtgatgattggaactgctctc
aatatgagcgagatgaagaagctcatcacgcacatgggtgagatggaccacccctggaac
tgtccccatggaaggccaaccatgaggcacattgcaaatctggacatcatctctcaaaac
tga
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