Arvicanthis niloticus (African grass rat): 117698307
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Entry
117698307 CDS
T08817
Symbol
Lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04514
Cell adhesion molecule (CAM) interaction
anu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117698307 (Lrrc4b)
04517 IgSF CAM signaling
117698307 (Lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117698307 (Lrrc4b)
Cell adhesion molecules [BR:
anu04515
]
Immunoglobulin superfamily
NGL family
117698307 (Lrrc4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
ig
LRR_9
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
LRR_EndoS
DUF7617
Ig_MYOM1
Motif
Other DBs
NCBI-GeneID:
117698307
NCBI-ProteinID:
XP_034345736
LinkDB
All DBs
Position
1:18116637..18151088
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AA seq
709 aa
AA seq
DB search
MAQAHIRGSPCPLLPPGRMSWPHGALLLLWLFSPPLRAGGGGVAVTSAAGGGSPPATSCP
AACSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENSIQVIRTDTFKHLRHLEILQLS
KNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAF
NRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSG
NRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFT
PLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSH
FTCYAPVIVEPPTDLNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHD
GTLNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAAGGPGGGGPGGGGGAGGA
GGYTYFTTVTVETLETQPGEEAQQPRGTEKEPPGPTTDGAWGGGRPDAAAPASASTTAPA
PRSSRPTEKAFTVPITDVTENALKDLDDVMKTTKIIIGCFVAITFMAAVMLVAFYKLRKQ
HQLHKHHGPTRTVEIINVEDELPAASAVSVAAAAAVAGGAGVGGDSHLALPALERDHLNH
HHYVAAAFKAHYGGNPGGGCGAKGPGLNSIHEPLLFKSGSKENVQETQI
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggcccacatccgcggctccccgtgccccttgctgccgcctggtaggatgtcc
tggccccacggggctctcctgctcctgtggctcttctccccacccctgagggccggtggg
ggcggtgtggccgtgacctcagccgccggaggaggctctccgccagccacctcctgccca
gcagcctgttcctgcagcaaccaggccagccgggtgatctgcacgcggagggagctggcc
gaagtgccagccagcatccctgtcaacacccgctacctgaacctgcaagagaacagcatc
caggtgatccgcaccgacacattcaagcacctcaggcacctggagatcctgcagctgagc
aagaacctggtgcgcaagatcgaggtgggagcgttcaatgggctacccagtctcaacaca
ctagagctcttcgacaaccggctgaccacagtgcccacacaggcctttgagtacttgtcc
aagctccgggagctgtggctgcgcaacaaccccatcgaaagcatcccatcctatgccttc
aaccgagtgccctcattgcgccgcctggacctgggcgagctgaagcggctggagtacata
tcggaggcggccttcgaggggctggtgaacctgcgctacctcaacctgggcatgtgcaac
ctaaaggacatccccaatctcacagcacttgtgcgcctggaggagctggagctgtcgggg
aaccggctggacctaattcgccccggctccttccagggcctcaccagcctgcgcaagctg
tggctgatgcatgcccaagtggccaccatcgagcgaaacgccttcgacgacctcaagtcg
ctggaggagctgaacctgtcccacaacaacctgatgtcgctgccgcacgaccttttcacg
ccccttcaccgcctggagcgtgtccacctgaaccacaacccctggcactgcaactgtgac
gtgctatggctcagctggtggctgaaggagacagtgcccagcaataccacatgctgcgca
cgctgccacgcgcccgccggcctcaagggccgctacatcggtgaactggaccagtcccac
ttcacctgctatgccccggtcatcgtggagccacccacagacctcaatgtcaccgagggc
atggcggccgagctcaagtgccgcacaggcacatccatgacgtcggtcaactggctgaca
cctaatggcacgctcatgacgcacggttcttatcgtgtgcgcatttcagtgctgcacgac
ggcacactcaacttcaccaatgtcaccgtgcaggacacgggccagtacacatgcatggtg
acaaattcagctggcaacactactgcctcggccacgcttaacgtgtcggccgtggacccc
gtggctgcgggagggcctggtggcgggggcccagggggtgggggcggtgcagggggcgcg
ggcggctacacctacttcaccacggttaccgtggagacgctggagacgcagccgggggag
gaggcccagcagccccgaggtactgagaaggagcccccggggcccacgactgatggcgcg
tggggcggtggccggcctgatgctgcagccccggcctcggcgtccaccacggcaccggct
ccgcgctcctcgcggcccacggaaaaagctttcacggtgcccatcacggacgtgacagag
aatgcgcttaaggacctagacgatgtcatgaagaccaccaaaatcatcatcggctgcttc
gtggccatcacattcatggccgccgtgatgctggtggccttctacaagctgcgcaagcag
caccagctgcacaagcaccacgggcccacgcgcactgtggaaatcatcaacgtagaggac
gagctgcccgccgcctctgctgtgtcggtggctgcagccgccgcggtggctggaggcgcg
ggcgtgggtggggacagccacctggcccttccggcgctggagcgagaccacctcaaccat
caccactacgtggcggccgccttcaaggcgcactatggcggcaacccaggaggcgggtgc
ggggccaagggccctggcctcaactccatccatgaacctctgctcttcaagagcggctcc
aaggagaacgtgcaagagacacaaatctaa
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