Arvicanthis niloticus (African grass rat): 117698566
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Entry
117698566 CDS
T08817
Symbol
Rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04140
Autophagy - animal
anu04211
Longevity regulating pathway
anu05010
Alzheimer disease
anu05014
Amyotrophic lateral sclerosis
anu05016
Huntington disease
anu05017
Spinocerebellar ataxia
anu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117698566 (Rb1cc1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
117698566 (Rb1cc1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
117698566 (Rb1cc1)
05014 Amyotrophic lateral sclerosis
117698566 (Rb1cc1)
05016 Huntington disease
117698566 (Rb1cc1)
05017 Spinocerebellar ataxia
117698566 (Rb1cc1)
05022 Pathways of neurodegeneration - multiple diseases
117698566 (Rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
anu01009
]
117698566 (Rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117698566 (Rb1cc1)
03029 Mitochondrial biogenesis [BR:
anu03029
]
117698566 (Rb1cc1)
Protein phosphatases and associated proteins [BR:
anu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117698566 (Rb1cc1)
Membrane trafficking [BR:
anu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
117698566 (Rb1cc1)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117698566 (Rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
117698566
NCBI-ProteinID:
XP_034345973
LinkDB
All DBs
Position
Unknown
AA seq
1588 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRAPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSDYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRMDSLNQHEGSEKAEMKRSTEL
VLSPDMPRTTNTSLLTSFHKSMEHVAPDSTDAERGRELRESCQSTVQQEEASLDAKDSDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPKIIQPFMLECHQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVRIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFKGLDSWPSSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKVSTSQASPQSAASPRIESATG
ITTTTSPKTPPPLTVQDTLCPAVCPLEELSPDSIDAHTFDFETISHPNTDQTVHQASIDL
DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTS
TRGNEGFGDRAALHVQLEKYRVAAQDSHISLQTIKDDLCHFRTFVQKEQYDLSNYLKCTA
VEIRNIIEKVKCSLEITLKEKHQQELQSLKLEYECKLDALAKDSEENVNKILKLKEDLVS
LEEALQNKDSEFALIKHEKDAVVCRQHEKDQKLLEMENIMHTQNHEIKELKQSREMVLED
LRKVHDEKIESLRAEFKCLEQSHLKELEDTLHIRHTQEFEKVMTDHKVSLEKLKKENQKR
IDQMLDSHASAIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAEADEIKILLEESRTQ
QKETLKSLLEQETGNLRTEISKLNQKIHDNNESYQVGLSELRALMTIEKDQCISELISRH
EEESNILKAELDSVTSLHHQAFEIEKKLKEQIVELQTKLNSELSALEKQKDEKITQQEEK
YEALIQTLEKDKERLVMNYEQDKEQLIQKLHFEKDEAVQTALNEFKLERELVEKELLEKV
KHLENQIAKSPAFESAREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSL
IAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKQ
LEEEVSKLRTSSFLPSAPVVAAPELYGACAPELPGEPERSALETADEGRVDSAMETSMMS
VQENMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSLSSVSSRHSEKIAIRDFQVGDL
VLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVMEKEYCQ
AKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtgtttctggttaacactggaaccactctgacatttgacactgagcta
actgtgcaaactgtggctgatcttaagcatgccattcaaagcaaatacaagattgctatt
cagcaccaggtgctagtggtcaatggaggcgaatgcatggccgcagatcgaagagtgtgt
acttacagcgccgggacggacacgaatccaatttttctttttaataaagaaatgatctta
tgtgaccgtgcacctgctattcctaaaactaccttttcaacagaaaatgacatggaaata
aaagtcgaagagtctcttatgatgcctgcagtttttcacactgttgcttcaaggacacag
cttgcagtggagatgtatgaagttgccaagaagctgtgctctttctgtgaaggtcttgtt
catgatgaacatcttcagcaccaaggctgggctgcaatcatggccaatctggaggactgc
tcaaattcataccaaaaacttcttttcaagtttgaaagtatttattctgattatctgcaa
tctatagaagacatcaagttaaaacttactcatttaggaactgcggtttcagtaatggcc
aagattccactgttggagtgcctaaccagacatagttacagggaatgtttgggaagaatg
gattctttaaatcaacatgaaggctcagagaaagctgagatgaaaagatctactgaactg
gtgctctctcctgatatgcctagaacaactaacacatccttgttaacctcatttcacaag
tcaatggagcatgtagctccagattccaccgatgctgaacgtggcagagaacttagggaa
tcttgtcaaagtactgtccagcaagaagaagcttcactagatgctaaagacagtgatctg
cctttttttaatgtttctttgttagactggataaatgttcaagatagacctaatgatgtg
gaatctctggtcaggaagtgctttgattctatgagcaggcttgacccaaagattattcaa
ccgtttatgttagaatgccatcaaactattgccaaacttgataatcagaatatgaaagcc
attaaagggcttgaagatcggctgtatgccttggaccagatgattgctagctgtagccgg
ctggtaaacgaacagaaagagcttgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgtgttacctgatctgtgcctgagtcatgcaaatcagctgatg
attatgttgcaaaaccacagaaaactgttggatattaaacagaagtgtaccactgccaaa
caagagctagcaaacaatctacatgtcagactgaagtggtgttgttttgtgatgcttcat
gctgatcaagatggagaaaaactgcaagcactactccgccttgtgatagagctgttagaa
agagtcagaattgttgaggctcttagtacagttcctcagatgtattgcctagctgttgtt
gaggttgtaaggagaaaaatgttcattaaacactacagagagtgggctggtgctttagtc
aaagatggaaaacagttatatgaagctgaaaagtcaaaaagggaatcctttgggaaatta
tttaggaagtcctttttaagaaatcgtttgtttaagggactggactcctggccttcctca
ttttgtactcagaagcctcgaaaatttgactgtgaactcccagatatatcactaaaagat
ttacagtttcttcaatcattttgtccctcagaagtgcagccattcctcagggttccctta
ctttgtgactttgaacctctacaccagcatgtacttgccctacataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagatctgctgaatgaacaaaaggtt
tccacaagtcaggcatccccacagtcagctgcttctccaagaatagaaagtgcaacaggc
attacaactactacctcaccaaaaactcctcctccactaactgttcaggataccttatgt
ccggcagtgtgtcccttagaagaattatctccagatagcattgatgctcatacatttgat
tttgaaaccatctcccatccaaacacagatcagactgttcaccaagcttctatagacttg
gattcattagcagaaagccctgagtctgattttatgtctgctgtgaatgagtttgtgata
gaagaaaatttatcgtctccgaaccctataagtgatccacaaagtccagaaatgatggtg
gagtcactttactcttcagtcatcaatgcgatagacagtaggcgcatgcaggacacaagt
actcgtggaaatgagggctttggggatcgggctgctctccatgtccaactggagaaatac
agagttgctgcccaggactctcacatcagtctacaaaccatcaaggatgatctgtgccac
ttcagaacatttgtacaaaaagaacagtatgacttatcaaattatttaaaatgtacagct
gtagaaataagaaatattattgaaaaagtaaaatgttccctagaaataacactaaaggaa
aagcatcagcaagaactccagtctttaaaacttgagtatgaatgtaaacttgatgcttta
gcaaaagacagtgaagaaaatgtaaataaaattttaaaattgaaagaagatttagtatcc
ctcgaggaggctttacaaaataaagacagtgaatttgctttgattaaacatgaaaaggat
gctgttgtctgcaggcagcatgaaaaggatcagaagttgctagagatggaaaatataatg
catactcaaaatcatgaaattaaagaactgaagcagtcacgagagatggtgttagaagac
ctgagaaaggtgcatgatgaaaaaatagagtccttgagagctgaattcaagtgcttagaa
caaagtcacctgaaggaactagaggacacactgcacatcaggcacacacaggagtttgag
aaagttatgacagaccacaaagtgtctttggagaaattaaaaaaggaaaatcagaaaaga
atcgatcagatgttagactctcatgcctcagctattcaggaaaaagagcaacagttgcaa
gaactgaaactcaaggtgtctgacttgtcagacatgaggtgtaagctcgaggttgaactt
gcactgaaggaagcagaggcggatgagataaagatcttgttggaagagagcagaacacag
cagaaggaaacgttgaaatctctacttgaacaagagaccggaaatttaagaacagaaata
agtaaactaaaccaaaaaattcatgataataatgagagttatcaggtgggtttatcagag
ttaagagctttaatgacaattgagaaagaccagtgcatttcagagctaatcagtagacat
gaagaagaatctaatatacttaaggctgaattagacagtgttacatctttgcatcaccaa
gcgtttgaaatagaaaaaaaactgaaagaacaaatagttgaattgcagactaaattgaac
tcagaactgagtgctcttgaaaaacaaaaagatgaaaaaataacccaacaagaagagaag
tatgaagcacttattcagactcttgagaaagacaaggagagattggtcatgaactatgaa
caagacaaagaacagttaattcagaagcttcattttgaaaaagatgaagctgttcaaact
gcactcaatgaatttaagttggagagagaacttgttgagaaagaattattagaaaaagtt
aaacatcttgagaatcaaatagccaaaagtccagcctttgagtcagccagagaagattct
tcaagcttagttgctgaacttcaggagaaacttcaggaagaaaaagctaagtttctggaa
caacttgaagaacaagagaaaaggaagaatgaagaaatgcaaaatgtccgaacctctttg
attgctgagcagcagaccaactttaacacagtcttaacaagagagaaaatgaggaaagaa
aacataataaacgatcttagtgataagttaaaaagtacaatgcagcagcaagagcgggat
aaagatttgatagagtcactttctgaagaccgagctcgtttgcttgaagagaagaagcag
cttgaagaggaagtgagtaaactgcgcactagcagtttccttccctcagcgcctgtggtt
gcagccccagagctttatggcgcttgtgcacctgagctcccaggtgagccggagagatca
gccctggagacggcagatgaaggcagagtggattcagcaatggagacaagcatgatgtct
gtccaagaaaatatgctatctgaagagaagcagaggatcatgctcctagaacggacactg
cagttgaaagaagaagaaaacaagcggttaaatcaaagattgatgtctcagagcttgtcc
tcagtatcttcaaggcattctgaaaaaatagccattagagattttcaggtgggagatttg
gttctcatcatcctagatgagcggcatgacaattatgtgttgtttactgttagtcctact
ttgtattttctgcattcagagtctcttcctgccctggatctcaaaccaggtgagggagct
tcaggtgcatcgagaagaccctgggtccttgggaaagtaatggaaaaggaatattgtcaa
gccaaaaaggcacaaaacagatttaaagttcctttggggacaaagttttacagagtgaaa
gctgtgtcatggaataagaaagtatag
DBGET
integrated database retrieval system
