Arvicanthis niloticus (African grass rat): 117698589
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Entry
117698589 CDS
T08817
Symbol
Chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117698589 (Chd7)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117698589 (Chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
CHDCT2
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
117698589
NCBI-ProteinID:
XP_034346021
LinkDB
All DBs
Position
Unknown
AA seq
2984 aa
AA seq
DB search
MADPGMMSLFGEDGNLFSEGLEGLGECGYPENPVNPMGQQMPIDQGFPSLQPSLHHPSPN
QNQTKLTHFDHYNQYEQKMHLMDQPNRMMGSAPGNGLASPHSQYHTPPVPQVPHGGSGGG
QMGVYPGMQNERHGQSFVDGGSMWGPRAVQVPDQIRAPYQQQQPQPAPSGPPAQGHPQHM
QQMGSYMARGDFSMQQHGQPQQRMSQFPQGQEGLSQGSPFIATSGPGHLSHMPQQSPSMA
PSLRHPVQQQFHHHPAALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRNQTVPSPTVNN
SGQYSRYPYSNLNQGLVNSTGMNQNLGLTNSTPMNQSVPRYPNAVGFPSNSGQGLMHQQP
IHSSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGMPMEVGS
YPNMPHPQPSHQPPGAMGIGQRNIGPRNMQQPRSFMGMSSAPRELTGHMRPNGCPGVGLA
DPQAIQERLIPGPQHPGQQPSFQQLPTCPPLQPHPGLHQSSPPHPHHQPWAQLHPSPQNT
PQKVPVHQHSPSEPFLEKPVPDMTQVSGQNAQLVKSDDYLPSIEQQPQQKKKKKKNNHIA
AGDPSKGFGKDDFPGGVDNQELSRNSLDASQEEKKKKKRPKVKKDPKELKEPKEKKEPKT
PKAPKIPKEPKEKKAKTVTPKPKSSKKSSNKKPDSEASALKKKVNKGKTEGSENSDLDKT
PPPSPAPEEDEDPGIQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGRDSPSNTSQSE
QQESVDAEGPVVEKIMSSRLVKKQKESGEEVEVEEFYVKYKNFSYLHCQWASVEDLEKDK
RIQQKIKRFKSKQGQSKFLSEIEDDLFNPDYVEVDRIMDFARSTDDRGEPVTHYLVKWCS
LPYEDSTWELRQDIDQAKIEEFEKLMSREPETERVERPPADDWKKSESSREYKNNNKLRE
YQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPN
WEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTD
CPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHF
LEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVEL
TNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFK
ETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRR
YPYERIDGRVRGNLRQAAIDRFSKADSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP
QNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATN
GVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIESEGKGSTFA
KASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAVKE
DELMEFSDLESDSEEKPCAKPRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDILSHGRY
KRQLTEQDVETICRAILVYCLNHYRGDENIKSFIWDLITPTADGQTRALLNHSGLSAPVP
RGRKGKKVKAQSTQPVLQDADWLASCNPDALFQEDSYKKHLKHHCNKVLLRVRMLYYLRQ
EVIGDQAEKILEGADSSEADMWIPEPFHAEVPADWWDREADKSLLIGVFKHGYEKYNSMR
ADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTRAPFKDEIDE
FANSPPEDKEDSMEVQSTGKHSESNAELGQLYWPNTSTLTTRLRRLITAYQRSYKRQQMR
QEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTFGVIFDPVKQ
QFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPEDEPPDLASLIEPITEER
ASRTLYRIELLRKIREQVLHHPQLSDRLKLCQPSLDLPEWWECGRHDRDLLVGAAKHGVS
RTDYHILNDPELSFLDAHKSFAQNRGASTVSSLNTLAMGFGQTPPVISSAHAHEEKVMEQ
AEGKAEECEHSLAKERSDGKEEEEEASGAKDVKQECEAEASSVKGELKGVEGSGDPGSKS
VSEKGSEEDEEEKLEDDDKSEESSQPEGAVSRGKTFDEESNASMSTARDETRDGFYMEDG
DPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFDFQGLVPGYPPS
TVDSPLQKRSFAELSMVSQANISTSEDITTSPQLSKDDALNLSVPRQRRRRRRKVEIEAE
RAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNFSSLTSKFILPNVST
PVSDAFKTQMELLQAGLSRTPTRHMLNGSLVDGEPPMKRRRGRRKNVEGLDLLFMSHRRT
PLSAEDAEVTKAFEEDIETPPIRNIPSPGQLDPDTRIPVINLEDGTRLVGEDAPKNKDLV
DWLKLHPAYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTLTGEERVPVVNK
RNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGPVVRGE
GASRRGRRPKSEIARAAAAAAAVASTSGINPLLVNSLFAGMDLTSLQNLQNLQSLQLAGL
MGFPPGLATAATAGGDAKSPAAVLPLMLPGMAGLPNVFGLGGLLNNPLSAATGNATTASS
QGEPEDGTKAEEKGNDNEDENRDSEKSTDAAVSAADSANGSVGAATAPAALPSNPLAFNP
FLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGASEEKAADKAEGGPCKDGET
LEGSDAEENLDKTVESSILEDEVAQGEELDSLEGGDEIENNGND
NT seq
8955 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtctttttggcgaggatgggaatctgttcagcgaaggc
cttgaaggccttggggaatgtggctaccctgaaaacccagtgaatcccatgggtcagcaa
atgcccatagaccaaggttttccctccttacagccatccctccaccatccttcccctaat
cagaatcaaaccaagttgacccatttcgatcactataatcagtacgaacaaaagatgcat
ctgatggatcagcctaaccggatgatgggcagcgcccccgggaacggattggcatctccg
cactcacagtatcacacccctcccgttccccaggtgccacacggaggcagtggtggcggt
cagatgggggtgtatcccggcatgcagaacgaaaggcacgggcaatcttttgtggatggc
ggctccatgtggggcccccgggccgttcaggtaccagaccagatacgagccccctaccag
caacagcagccacagccagctccgtcggggccaccggcacagggccacccccagcacatg
cagcagatgggcagctatatggcacgtggggacttctccatgcagcagcatgggcagcca
caacagaggatgagccagtttccccaaggccaggagggcctcagtcagggaagccctttc
atcgccacctcaggacctggccacctgtcccacatgccccagcagagccccagcatggcc
ccttccctgcgtcacccggtacagcagcagtttcaccaccaccccgctgctctccacgga
gaatccgttgcccacagtcccagattctcccccaatcccccccaacaaggggctgtcagg
ccacaaacccttaactttagttctcggaaccagacggtcccctcccctactgtaaacaac
tcagggcagtattctcgatatccttacagtaacctaaatcagggattagttaacagtaca
gggatgaatcaaaatctaggccttacaaacagtactccaatgaatcagtccgtaccaaga
taccccaatgctgtaggattcccgtcaaacagtggtcagggactcatgcaccagcagccc
atccactccagtggctcacttaaccaaatgaacacacaaactatgcacccttcacagcct
cagggaacttatgcctctccacctcccatgtcacccatgaaagcaatgagtaatccagca
ggcacgcctccgccgcaagtcaggcctggaagcgctgggatgccaatggaagttggcagt
tatccaaatatgccccaccctcagccatctcaccagccccctggtgccatgggaatcgga
cagaggaatataggccccagaaacatgcagcagcctcgttcattcatgggcatgtcctcg
gcacccagggagctgaccggacacatgagaccaaatggttgccctggtgttggtcttgcg
gatccacaagcaatccaggaacgactgatacctggcccacagcaccctggtcagcagcca
tcctttcagcagttgccaacctgtcctccactgcagccccacccaggcctgcaccagtct
tcacctccacacccccatcaccagccttgggcacaacttcacccgtcaccccagaatacc
ccgcagaaagtgcctgtgcatcagcattctccatcggagccctttctagagaagccagtg
ccggatatgactcaggtcagcggacagaacgctcagctagtgaagagcgacgattacctg
ccgtcgatagagcagcagccacagcagaaaaagaagaaaaagaaaaacaaccacattgct
gcaggggatcccagtaaaggttttggtaaagatgacttccctggtggggttgataaccaa
gaactgagtaggaactcactggatgcgtcccaggaagaaaaaaagaaaaagaaaaggccg
aaggtcaaaaaagatccgaaggaattgaaggagccgaaggagaagaaagagcccaagacc
ccaaaagccccgaagatccccaaagagccaaaggaaaagaaagcaaaaactgtcacgcca
aaacccaaatccagcaaaaagtcaagtaataagaaaccggattcagaagcaagtgctttg
aagaaaaaggtcaacaaaggaaaaacagaaggttctgaaaattcagacttggacaaaaca
cccccaccatcccctgcccctgaagaggacgaagacccaggtatccagaagaggcggtcc
agcaggcaggtgaagaggaagcgatacactgaagatttggagttcaagatttctgatgag
gaggcagatgatgcagatgctgctgggagagactccccatccaacacctcacagtcagag
cagcaggaatctgttgatgcagaaggcccagtggtggagaagattatgagcagtcgctta
gtgaaaaagcagaaggaatctggcgaggaggtagaagttgaagaattttatgtgaagtac
aaaaacttctcctatctccattgtcagtgggcatcagtagaagatctggaaaaagacaag
agaattcagcaaaagataaaacggtttaagtcaaaacagggccagagcaaattcctttca
gagattgaggatgatctttttaatccagattatgtggaagttgaccggataatggacttt
gcacgtagcacagatgaccggggcgagcctgtgactcactatctggtgaagtggtgctca
ctcccttacgaagacagcacatgggagctgaggcaggacatagatcaagccaagattgaa
gagtttgaaaagctcatgtccagggagccggaaacagagcgtgtggagcgacctcctgct
gatgactggaagaagtccgagagttccagggagtataaaaacaataacaaactcagggaa
taccagttggagggagtaaactggctacttttcaattggtacaacatgcgaaactgcatt
ttagcagatgaaatgggtttgggaaaaactatccagtccattacatttctctatgagata
tatttgaaaggaatccatggcccttttttagtaattgccccattgtccacgatccccaac
tgggaaagggaattccgaacctggacggagttgaacgtggttgtgtaccatgggagccaa
gctagtcgtcggaccattcagttgtatgaaatgtacttcaaagatccccagggtcgagtg
ataaaggggtcctataagtttcacgccatcatcactacgtttgagatgattctgacagac
tgtcctgagctgcgtaatattccctggcgctgtgtggtcatcgacgaagcccacaggctg
aagaacaggaactgcaagctgctggaaggactgaagatgatggacttggaacacaaagtg
ctgctgaccgggaccccgctgcagaacactgtggaagagctcttcagcctgcttcacttc
ttggagccaagtcgcttcccttcagaaacaacctttatgcaagaatttggtgatctgaaa
acagaggagcaggtgcaaaaactacaggctattctaaagccaatgatgttgagacgcctg
aaagaggatgtagaaaagaacttggcccccaaagaagagactattattgaagttgagcta
acaaacattcagaagaaatattaccgagccatccttgagaagaattttacatttctttcc
aaaggtggtggacaagctaacgtacctaaccttttaaacactatgatggaactgagaaag
tgctgcaatcatccctacctaatcaatggtgctgaagagaaaattttggaagagtttaaa
gaaacacacaatgcagagtctccagattttcagctccaggcaatgatccaggctgctggc
aagctggtgctgattgacaagctgctgccaaagctgaaggctggtggccacagggtgctc
atcttttcccagatggtgcgctgcctagacatcctggaagactatctcattcagagacgg
tacccatacgaaaggattgacggccgggtcagaggcaacctccggcaggcagctattgac
agattctccaaagctgactctgataggtttgttttcctcctgtgcacacgggcaggaggg
ctcggcattaacctcactgctgctgacacttgcatcatctttgattcagactggaatccc
cagaatgacctccaggctcaagctagatgccacagaatagggcagagcaaatctgtgaaa
atctacaggctgattacaaggaactcctatgaaagggaaatgtttgacaaggctagtctg
aagctgggtctggataaagccgtgttgcagtctatgagtggaagagaaaatgccaccaat
ggggtacaacagctttccaagaaggaaatcgaagacctccttcgaaagggggcttatggt
gcacttatggatgaagaagatgaagggtctaagttttgtgaagaagatatcgaccagatt
ctccttcgacgaacccacactattaccattgagtctgaaggaaaaggttccacgtttgct
aaggccagttttgttgcatctggaaataggacagatatttctttggatgacccaaatttc
tggcagaagtgggctaagaaggctgaattggacatcgatgccttaaatgggaggaacaac
ctggttatcgacactccgagagtgaggaagcagacccggctatacagcgcagtgaaagag
gacgagctgatggagttctccgacctggaaagcgactcggaagaaaagccttgtgcaaag
ccacggcgcccccaggataagtctcagggctatgcccgaagcgagtgcttcagggtggag
aagaatctgctggtttacggctggggccgctggacagatatcctgtcccacggacgctac
aaacgtcagctgacggagcaagatgtagaaaccatctgcagagccatcctggtgtactgt
ctcaatcactacagaggagacgagaacatcaagagctttatctgggacctgatcacgccc
acggccgatggccagacccgagccctgctcaatcattccggtctgtcagcccctgtgcca
aggggccggaaggggaagaaggtgaaggctcagagtacgcagccggtgttgcaggatgct
gactggctggcaagctgcaacccagatgccctgttccaggaggacagctacaagaagcac
ctgaagcaccactgcaacaaggtcctgctgcgtgtccgcatgctgtactacctaagacaa
gaagtgataggagaccaggcagagaagatcctggagggcgctgactcaagtgaggcagac
atgtggatccctgagccgttccatgctgaagttcctgcagattggtgggatagggaagca
gataaatccctcttaattggagtgtttaaacatggctatgagaagtacaattccatgcga
gctgaccccgcactgtgcttcctggaacgagtcggtatgcctgatgccaaggccatcgcc
gctgagcagagagggacagacatgttagcagatggtggtgatggtggagaatttgataga
gaagatgaagatccagaatataaaccaacgagagcgccattcaaagatgaaatagacgaa
tttgcgaattctcccccagaggataaggaagactccatggaggtgcagagcacaggcaag
cacagcgagagcaatgccgagttaggtcagctctactggccgaacacgtcaaccctgact
acgcgtctgcgccggctcattactgcctatcagcgcagctataaaaggcaacaaatgagg
caagaggccctaatgaagacagaccggcgcagacggaggcctcgggaggaagtgagagcg
ctggaggcggaaagggaggctattatatctgagaaaaggcaaaagtggacaagaagagaa
gaagctgacttttaccgggtggtatccacctttggggttatttttgaccccgtgaaacag
cagtttgattggaaccaattccgagcctttgccagactagacaaaaagtctgatgagagt
ctggagaagtatttcagctgctttgtggccatgtgcaggcgggtgtgtcgaatgcctgcc
aagcccgaagatgagccacctgaccttgcctccctcatcgagcccatcacagaggagcga
gcgtccaggacactgtaccgcattgaactgcttcgcaagatccgagagcaggtccttcat
cacccacaactgagcgacaggctgaagctctgccagcccagcctagacctgcctgagtgg
tgggagtgtggacggcatgacagggacctgctggtgggtgctgctaagcatggggtcagc
aggacagactaccacattctcaatgaccctgagttgtccttcttggatgcccacaaaagc
tttgctcagaaccgtggggccagtaccgtatcttctttgaatactctggccatgggcttt
ggccagactcctccagtcatttcctctgctcatgcccatgaagaaaaggtaatggagcag
gctgaaggcaaggcagaggaatgtgaacactcactggccaaagagaggtcggatgggaaa
gaggaggaagaggaagccagcggggccaaggatgtcaagcaggagtgtgaggccgaggcc
agctctgtgaagggtgaactcaaaggggtggagggcagtggagaccctgggtccaagtct
gtctcagagaaaggctcagaagaggatgaagaagagaagcttgaggacgacgataagtcg
gaggagtcgtcgcagccagaaggagctgtctctagagggaagactttcgacgaagaaagc
aatgcgtctatgagcactgctagggatgaaacccgagatggattctacatggaggatgga
gacccttcggtggctcagctccttcacgagaggacgtttgccttctccttttggcccaag
gacagagtaatgataaaccgattagacaacatctgtgaagctgtactgaaaggcaaatgg
ccagtaaatcggcgccagatgtttgatttccagggcctcgtccctggttacccaccctcc
actgtggacagtcccttgcagaagaggagctttgctgagctctccatggtcagccaggcc
aacatcagcacaagcgaggacatcaccacctctcctcagttgtctaaggatgatgccctc
aacctgtctgtccctcgccaacggcggcggagaaggaggaaagttgaaatcgaggctgaa
agagctgccaagaggcgaaatcttatggagatggttgcccagcttcgagagtctcaggtg
gtctcagaaaatggacaagaaaaagttgtggacttatcaaaggcctcaagagaggcaaca
agttctacctcaaatttttcatctcttacttcaaagtttatcttgcctaatgtctccaca
ccagtgtctgatgcctttaagactcagatggagctgctccaagcaggcctttcacgcaca
cctacaaggcatatgctcaatggctccctggtggatggagagccccccatgaagaggagg
cgaggcaggaggaaaaacgtggagggcctcgacctgcttttcatgagccacagacggacg
ccgttaagtgcagaggatgctgaggtgaccaaagcttttgaagaagatatagagacccca
ccaataagaaacattccttctcctggacagctggaccctgacacccggatccctgtgata
aaccttgaagatgggactaggctggtgggagaagacgctcctaaaaacaaggacttggtt
gactggctgaagctgcaccccgcttacactgtcgatatgccgagttacgtaccaaagaat
gcagacgtgctgttttcctcgtttcagaaaccgaaacagaagcgacatagatgtcgaaat
cctaataaattggatataaacactttaacaggagaagaaagagttcccgttgttaacaaa
cggaatgggaagaagatgggtggagccatggcccctccaatgaaggacctgcctaggtgg
ctggaggagaaccctgagtttgcagttgctccagattggactgacatagtcaagcagtct
ggttttgttcccgagtcaatgtttgaccggctcctcactggacccgtggtgcggggagaa
ggagccagcaggagaggacggaggcccaagagcgagatcgcccgagcagccgcagcggct
gctgcagtcgcctctacttcagggatcaaccctctgttggtgaacagcctgttcgctggg
atggacctgacaagccttcagaatctccagaacctccagtccctccagctggcagggctc
atgggcttccctccaggactggccacagctgccaccgccggaggcgatgctaagagcccc
gccgcagtgctgcccctgatgctgccagggatggcgggcctgcccaacgtgttcggcctg
ggcgggctgctgaacaaccctctctcagctgctactggaaacgccactactgcttcgagt
caaggagagccagaggacggcactaaagcggaagagaaaggaaacgacaacgaagatgag
aaccgagactctgagaaaagcacagacgccgccgtttcggctgctgactctgcaaacgga
tctgttggtgctgctactgccccggctgcattgccctccaacccgctggccttcaaccct
ttcctcctgtccaccatggccccaggcctcttctacccatccatgtttctacctccagga
ctggggggattgacactgcctggcttcccagcactggcgggactccaaaacgctgtgggt
gccagcgaagaaaaggctgctgacaaggccgagggaggcccctgtaaagacggagagacc
ctggaaggcagcgatgccgaggagaacctggacaagactgtagagtcctccatcttggaa
gacgaggttgcacagggtgaagagctggactccctcgaaggcggggatgagatagaaaac
aacggaaatgactag
DBGET
integrated database retrieval system
