Arvicanthis niloticus (African grass rat): 117698622
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Entry
117698622 CDS
T08817
Name
(RefSeq) oxygen-regulated protein 1-like
KO
K19538
retinitis pigmentosa 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
anu03037
]
117698622
04812 Cytoskeleton proteins [BR:
anu04812
]
117698622
Cilium and associated proteins [BR:
anu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117698622
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
117698622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
117698622
NCBI-ProteinID:
XP_034346076
LinkDB
All DBs
Position
Unknown
AA seq
2117 aa
AA seq
DB search
MSETSSTSFSMIHLPSSEGQISSHHSNVTHPVVAKRIRFYKSGDPQFGGVRVAVNPRSFK
TFDSLLDNLSMKVPLVFGVRNISTPRGRHNITRLEELEDGKSYICSHNKKVIPVDLDKAR
SRPRPWLSSCSLSTHVQLRSAAATMSTTAPGMLRVPRRLVVFRNGDPKTRRVVLLSWRIT
QSFKAFLQYLTEAMQCPVTKLYTTDGRKVPSLQAVILISGAVVAAGREPFKPGKYDTPKY
LLPAKLPGISHRVHQNRKAKIKERKMSTHTSSVVRPQTDSLASEKIYDCFSDFSVAPENY
LTLEKHDSQTLSTYPSEDGVEKSIVFNQDGTMTVVMKVRFKIKEEETIKWTTTVNRAGLS
NNDEKSKISSYPGKTNNRSSSLQLAACSMSEDITDITQQGSLTEEENTQMTEQQGLLYSS
AGWENASVETDIRGSQKKVKHFYRPPTPGPRRMRQKKSVIGTVTVVSETEVQEKQFSYSK
EREGREKSEYHMFTHSCSKMSSVSNKLVQISSNDEMESALERTKESGLLKSHAINAGAIE
MTSQKVLKMCHNNALASTVSENSVVEEGRDDSAVSSKGTIKHFRTCGNASDSFSSTTADT
TLTSGNSCPNDKIISKVPSVGSPVLTTRLVHEFAHCGLTEHPENGKQVSSSFASKKQKKS
QQRKIASKDKKKVIETKGTPNKVGKIHRAETTAWETLLQDPDCPDKGGKVCEEGLVTSPT
VIKFNDFFPKSNFKFSKNFKKNKLNTFQNPKTQKLLAKRKSRPLKIISIGGLRKQEIGQE
DKVFLHNESKCCESNLEKQSLRHVFNILEEDQKALHRPQSQVEKVTGNLKGMMKKSCVTK
VNDLHITLRNQKKQKGVKLKSGATVREQHLTTREDPLASLKKTDFPEGVPRHSVKSYVQR
WLQNINPYPDFDYSKSASLCQNRSNVINYSSNGFPENNLHTTSSKGNSLLMESNEHRTKN
ADWTGNKNQETDKSFVAKDNGEDNKHPCESQDGSLNDSYLVSLHENCMLSQTSINDPSTK
TQLSTEKSRPEVKLVYQEMNFATKGQSIEVAIQVDTMGENVSKDYLPSLLLRYLETFVPH
NQKHQNGISQVPGSLAEVVFPSAIYNSSTNLLLAWLLVLNLKRNVNSFCQSDAYKMTSRS
SETAALLEVLKHVAITEEADDLKAAVANLVESTKTCSGPSEREHDMVPANCTAASLHSVD
KCNENESTQKTVLDESYSVRGDCVSEMVSKSHKSPCEMHTVSMTHLPKEVANQSNALFTS
STMSQCSMHDASFLGETCFLADGVCSHKTCAQKKNIYEATYPSDETHIPIRECNAIDSVN
SKENKCTDDLELTEELKTDDKSPKDLSILADSTYKNDSNISSSSQNVNKLSSPGIFLSKT
YLESDKDYSPLEKLQNVPLKNIVNQKKSISSDKEESKSTSEEPRSITNSVTSSERNTISE
LESFEELESQDTGIFSVKVRDEDKATKESVQKESEARMSVELINISGRNIIEQERRNTEI
LETTGRGHVTPPSLVFCYDSNKNTEKEITVGETKMRVKTMADSMEDESYMESSLNFKKHH
RSPGALDWSDYGSDSESGYSCKTSSNDHNDDISQEREYPRGIVKRAIEKLYGKAEIIKPP
FFHGSIHKSQVCPYNPVDVQFAEKTNFYESECQSLVSSEQVSRSSFMLQEFQEERQAEID
FNDTGDSFGNNSIERVTKSSECDRVFMEKEKGKLIDNGKWLLRENHLWRVSSDNPGMYSN
ADTTSVDTLISKNSIEVPYSHFRELAPGPTMAELYSSELEEMTQPLEAKCNYYFPHGSDS
ELFGEDFLDAQKKTCPTEKIPNHHKEEKGNNPSERMCTSVTQAFASAGNKVHPVCGDAIK
AQPLPGSGITHGAVQEGDSLDKLYALCGQHCPILTVIIQPGNEEDRGFAYRKDSDIENFL
GLQLWMKIYPFLLQSKKNMFRSESRKVSVGKEFTDNAIGDLCDQLYFKSMIDLVDKRANS
LGKKINLKKFQLYLKKKVSDLLSMLLLVVWDMDLVSLTPSNWTDNFKSVDENNNFINKFQ
NSRKNSIQVVRENTSCQLELFGQVYLLDICQVEKPLNIKTRSKLYIYILEDEVLFTWEEE
NQLNIINTESPNEQNDL
NT seq
6354 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagacatcttccactagtttctccatgattcatctgccttcttctgaaggtcaa
atttcttctcatcattcaaatgtcactcatcccgtagtggctaaacgtatccgtttttat
aagagcggagacccccagtttggtggtgttagggtggcggtcaaccctcgttcctttaag
acttttgactctctgctggacaacttatccatgaaggtgcccctggtctttggggtgagg
aatatcagcacgcctcgtggacggcacaacatcaccaggctggaagagctagaggatggc
aagtcttacatatgctctcacaataagaaggtgattccagttgacctggacaaggcccgc
agccgccctcgaccctggctcagcagttgttctctaagcacacatgtgcagctccgctct
gctgctgctaccatgtccaccacagctcccgggatgctccgcgtcccaaggaggctagtg
gtcttccggaatggtgacccaaagaccaggcgtgtggtccttcttagctggaggatcact
cagagcttcaaagcctttctacagtacctgacggaggccatgcagtgtcctgtgaccaag
ctgtataccacagatggaagaaaagttcctagtctccaggcagtgatactgatctccgga
gctgtggttgcagccggaagggagccatttaaaccagggaagtatgacaccccaaaatac
ttgcttcctgccaagttaccagggatctctcatcgtgtgcatcagaacagaaaagccaag
ataaaagaaagaaagatgagcacacatacttcttcagtcgtaagaccccagacggattcc
ctggcctcagagaaaatatatgattgcttttcagacttttctgtagcccctgagaattac
ttgaccttagaaaaacatgattctcagactctatcaacatatccttctgaagatggtgtt
gaaaaatcgattgtatttaatcaagatggtactatgacggtcgtgatgaaagttcgattc
aagataaaagaagaagaaactattaagtggacaaccactgtcaatagagccggtctttct
aataatgatgaaaagagtaagataagtagttaccctggaaaaacaaataatcgatcatct
agtttacagcttgcagcatgttcaatgtctgaagacatcacagacatcactcagcaggga
agtttgacagaggaagaaaatactcagatgacagagcagcagggtctgttgtatagctct
gctggttgggagaatgcctctgtggagacagacattcggggaagccagaaaaaagtgaaa
cacttttatagacccccaacccctggaccaaggagaatgagacaaaagaaatctgtgata
gggactgtcactgtagtatctgaaacagaggttcaagaaaagcagttttcctatagtaaa
gaaagagagggtagagaaaaatctgagtaccacatgtttacacattcttgcagtaaaatg
tcatcagtatctaataaacttgttcagatcagtagcaatgatgagatggagtcagcatta
gaaagaacaaaggaaagtggactgctcaagtcacatgccataaatgctggtgctatagaa
atgacaagtcagaaggtcttaaagatgtgccataataatgctttagcatcaactgtatca
gagaactcagttgtggaagaaggcagagatgacagtgcagtatcaagcaaaggcactatc
aagcacttcagaacttgtggtaatgccagtgacagcttcagttctactacagcagataca
actcttacctcaggtaacagctgtccaaatgacaaaattatttctaaggttccttctgta
ggatctcctgtgctcaccacaagacttgttcatgaatttgctcattgtggtttaacagaa
catccagaaaatggaaagcaggtttcatcctcttttgccagcaaaaagcagaagaaatct
cagcagcgaaaaatagcttccaaggataaaaaaaaagtcattgaaaccaaaggaacccct
aataaagttggaaaaatacacagagcagaaacaactgcatgggaaacattattgcaagat
ccagactgtcctgataaggggggaaaagtttgtgaggagggccttgttacaagtcctaca
gtaattaaattcaatgatttctttcccaaaagtaatttcaaattttccaagaatttcaag
aaaaataaattaaatacttttcaaaatcccaagactcaaaaacttttagccaaaagaaaa
tcaagaccactaaagattataagcatagggggactcagaaaacaagaaattggtcaagaa
gataaagtatttcttcataatgaatctaaatgctgtgaaagtaatttggaaaaacaaagt
ctacgtcacgtatttaatatccttgaggaagaccagaaagctttgcatagaccacaatcc
caagtggagaaagtaactggaaacttgaaaggaatgatgaaaaagagttgtgtcacgaaa
gttaatgatttgcacataactttgagaaaccagaaaaaacaaaagggagttaaattaaag
tcaggtgctacagtaagggaacagcaccttacaacccgggaagatccattagcttctttg
aaaaaaactgattttcctgagggtgttccccgtcattcagttaagagctatgtacagcga
tggttgcagaacataaacccatatccagattttgattacagcaagtcagcttcactatgc
caaaatagaagcaatgtgataaattatagcagtaatggtttcccagaaaataatcttcat
acaacttcttcaaaaggaaatagtttgttaatggagagtaatgagcacagaactaaaaat
gccgattggacaggcaataagaaccaagagacagataaatcttttgttgctaaagataat
ggtgaagataataaacatccctgtgagagccaggatgggtctctgaatgattcttacttg
gtttctttgcatgaaaattgtatgttgtcacagaccagtattaacgatcctagtactaaa
actcagttatctaccgaaaagtcaaggccagaagtgaagcttgtttaccaagaaatgaac
tttgctacaaaaggtcaaagtattgaggttgccattcaggtagatactatgggagagaat
gtttcaaaagactacttaccatccctgttgcttcgataccttgaaacttttgttcctcat
aatcagaaacaccagaatggaatttctcaagtaccaggttcattagcagaggttgtcttc
ccttctgcaatatataattcatctacaaatctccttctggcttggcttttggtactaaat
ctaaagagaaatgtgaatagcttctgtcaaagtgatgcttataagatgaccagcagatct
tcggaaacagctgcactgttggaagttctgaagcatgttgccatcacagaggaagctgat
gacttgaaggctgctgttgccaacttagtggaatcaaccaaaacttgcagtggacccagt
gagagagaacatgatatggtaccagcaaattgtacagcagccagccttcacagtgtggac
aagtgtaatgaaaatgagagtactcagaagactgtcttggatgaaagctactctgtcagg
ggggactgtgtttcagaaatggttagcaagtcacataaatctccatgtgagatgcacact
gtgagcatgactcatcttccaaaagaggtagctaaccagagtaatgcccttttcactagt
tctactatgagtcagtgctccatgcatgatgcttctttcctaggagagacctgcttcctg
gcagatggtgtgtgctcccataagacttgtgctcagaagaagaacatctatgaggcaact
tacccaagtgatgagactcacattcccatcagagagtgcaatgcaattgactctgtgaat
tcaaaagaaaacaaatgcactgatgatctggaattaactgaagaactcaaaactgatgac
aaaagtccaaaagatctaagtattttggcagattctacttataaaaatgactctaacata
tcaagctcatctcaaaatgtcaataaattaagttccccaggtattttcctaagtaaaact
tatctagaatctgataaggactatagtcctctagaaaaattgcaaaatgtcccacttaag
aatattgtgaatcaaaaaaaatctatttcttctgataaggaagaatcaaagagtacttct
gaagaaccaaggtcaataaccaatagtgtgacatcaagtgaaagaaataccatttcagag
ttagaatcttttgaagaattagaaagccaagacacaggcatcttcagtgtgaaggtaagg
gatgaagacaaagctaccaaggaatcagtgcaaaaagaatcagaggctaggatgagtgtg
gaattgataaacatatcagggagaaatattatagaacaggaaagaagaaatactgagatt
ctggagacaactggtagggggcatgtgacaccgccatctttagttttttgctatgattct
aataaaaacactgaaaaagagatcactgtaggagaaactaagatgagagttaagacaatg
gctgacagcatggaagatgaaagttacatggaatcctcacttaattttaaaaaacatcac
agaagtccaggggccttagactggtcagattatggatcagacagtgagagtggatattct
tgtaaaacatccagcaatgatcacaatgatgacatcagccaagagagagagtatcctaga
ggaattgttaagagggcaatagaaaagctttatggcaaagcagagattatcaaaccacca
ttttttcatgggtctatacacaaatctcaagtttgtccttataatcctgtggatgttcag
tttgctgagaaaaccaatttttatgagtctgaatgtcagtctttggtctcttctgaacag
gtatctagaagttcattcatgctacaggaattccaggaggaaagacaagctgagattgat
tttaatgacactggagacagttttgggaacaatagcatagaaagggttacaaaatcaagt
gagtgtgacagggtttttatggaaaaagagaagggaaaactgattgacaatggcaaatgg
ctcctgagagaaaatcatttgtggagggtatcatcggacaatcctggcatgtacagcaat
gcagacaccacatcagtagatactctaatcagtaagaacagcattgaggtgccatattca
catttcagagagttggctcctggcccaacaatggctgaactgtactcctcagaactagag
gaaatgactcaaccccttgaagcgaaatgcaattattatttccctcatggtagtgactct
gaactttttggcgaagattttctagatgcgcagaaaaaaacttgtcccacagagaaaata
cccaatcaccacaaagaggagaagggtaataatccatctgaaagaatgtgtacatctgtt
actcaagcttttgcttctgctggtaataaagtccaccctgtctgcggtgatgctattaaa
gctcagccattacctggaagtggtataactcatggtgcagttcaggaaggtgactctttg
gataagctctatgctctttgtgggcaacattgtccaatactaactgttattattcaacct
ggaaatgaggaagaccgaggatttgcttatcgcaaagattctgatattgaaaattttttg
ggtcttcagttatggatgaaaatatacccatttctgctacagtcaaagaaaaacatgttc
agaagtgagagcaggaaagtgagtgtgggcaaagaatttactgataatgccattggtgat
ctgtgtgatcaactttatttcaaaagcatgattgacttggtagataaaagagctaactct
ttggggaagaaaattaatttgaagaaattccaattatatttaaagaaaaaggtatcagat
cttttgtccatgttattgctagtggtgtgggatatggatttggtttcactaacccctagc
aattggacagataacttcaaaagtgttgatgagaataacaacttcattaacaaattccag
aactcaagaaaaaattccatccaagtagtaagagaaaacaccagttgccagctggaactg
tttggtcaagtttacttgttagatatttgccaagttgagaaacccttaaatatcaaaacc
agaagtaaactatatatatatattttagaggatgaagttcttttcacctgggaagaagaa
aatcaattaaatataataaatactgaaagccctaatgagcagaatgatttataa
DBGET
integrated database retrieval system
