Arvicanthis niloticus (African grass rat): 117698702
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Entry
117698702 CDS
T08817
Name
(RefSeq) DNA repair and recombination protein RAD54B-like
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117698702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anu03400
]
117698702
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
117698702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Myb_DNA-bind_5
ResIII
HDA2-3
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
117698702
NCBI-ProteinID:
XP_034346200
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MVGKARSSNFTLSEKLDLLNLVKPYVKILEEHTNKNSVIVEKNRCWDVIAVNYNAIGVDR
PPRTAQGLRSLYKRLKEYAKQELLQQREAQAEFKSNISEPTKKVMEMIPQISSFCLIRDR
NHIQSANLDEAAQAGTSSLQAMVDHHPAAITVEVKQEEDIKPSPPLVSNPQLSDTLEQRE
EQELMHVVEGSMSPSLSSVDMRMTSSPSSIPRRDDIFHQESGEHFRSLLRCDPQVLQMLK
EEHQIILENQKNFGLYVQEKRDGLKRRQRLEEELLRARIEVEKLKATRLRHVHSASEEIL
ESKAQEEEASSLYKYFSVVWCKASKKKHKTWEGDAILIVKGRSFTLKDLEGKDIGRGIGY
RFKELENVEEGQTLVIGGKEIEILGTVSSEDFSSGKCFQHGSGSSAVPSAQAARKYFSNP
FKSVCPSTQAKGNRGNDWQNCKPRHDPNTPNALVMPQPDKSHQRVFNRNSFPIVDVVIDP
HLVRHLRPHQKDGIIFLYECVMGMRTIGKCGAILADEMGLGKTLQCISLIWTLQCQGPYG
GKPVIKKTLIVTPGSLVKNWRKEFQKWLGSERIKIFTVDQDHKVEEFINSTFHSVLIISY
EMLLRSLDQIKTITFGLLICDEGHRLKNSSIKTTAALSSLSCEKRVILTGTPVQNDLQEF
FALVDFVNPGILGSLSSYRKIYEEPIIVSREPSSSEEERELGERRAAELTRLTGRFILRR
TQEVINKYLPPKVENVVFCRPGALQIELYRKLLSSQSVRFCLQGLLENSAHLICIGALKK
LCNHPCLLFSSVKGKEFSSSCEENEERNLCQGLLTVFPAGYNPLQFSENESGKLQVLGKL
LAVIRELRPTEKVILVSNYRQTLNILEEVCKRHGYACARLDGQTPVSQRQQIVDSFNSTY
STDFVFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLT
TGTIEEKIYQRQISKQGLSGAVVDLTRSSEHIQFSVEELKNLFTLHENSQCVTHDLLDCE
CTGGEDHTDDALEGPVTSRQCQLGPQKSNSLRPLSMSQLKQWKHFSGDHLNLPDPFLERI
RENVSFFFQNITNQAPAI
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggtaggaaaggctaggtcttccaattttaccttatctgaaaagcttgatttgctaaac
cttgtgaagccatatgtgaaaattctcgaagagcacactaataagaattcagtaatagtg
gagaagaatagatgctgggatgtcatagcagttaactataatgcaattggagtagaccgc
cctcctcgcacagctcagggcctacgcagcctttacaaaaggctcaaagaatatgccaaa
caggagctgttgcagcaaagggaggcccaggcagagtttaaaagcaatatctcggagcca
accaagaaagttatggagatgattccccagatttccagcttttgcctgataagagacagg
aaccacatacaaagtgcaaacttggatgaggctgcccaagctgggaccagttcactgcag
gcaatggtggaccaccatcctgctgctatcactgtagaggtgaagcaagaagaggacatt
aagccatctcctcccctggtttcaaatcctcaactcagtgatactttagagcaaagagaa
gagcaggaattaatgcatgttgtggaaggatccatgtctccatctctctcttctgttgat
atgagaatgacgtcatctccatcttccatcccgaggagagatgatatttttcatcaggaa
agtggagagcactttaggtctctgctaagatgtgaccctcaggtcctgcaaatgttaaaa
gaggaacatcagataattttagaaaatcaaaagaatttcggattgtatgttcaggagaag
agggatggattaaaaagaaggcagcggctggaggaggagctgctgagagcaaggattgaa
gtagagaagctgaaagcaactcgcttacggcatgttcactcggcctctgaagaaatctta
gagtccaaggcccaagaagaggaagctagcagcttgtataaatatttcagtgttgtttgg
tgtaaagcttccaagaaaaaacacaaaacatgggaaggcgatgctattcttattgtaaaa
ggaaggtccttcacattgaaagatttggaaggaaaagatattggaagaggcattggatat
agattcaaggaacttgaaaatgtagaagaagggcaaacactggtgattggcgggaaagag
atagagatcctgggcacagtctcttctgaggacttcagcagtggcaagtgttttcagcat
ggaagtggaagttctgccgtccccagtgctcaggctgccaggaagtacttttctaaccct
ttcaaaagtgtgtgtccgtcaacccaagcaaagggaaatagagggaatgactggcaaaac
tgcaaaccacgccatgacccgaacacaccaaatgccctggttatgccacaaccagacaag
agtcaccagcgggtgtttaataggaacagctttcctattgtggatgtggtgatagaccct
catcttgtacgtcacctcagaccacatcagaaagacggaatcatcttcctctatgagtgt
gtgatgggaatgagaacaattggcaaatgtggtgctattcttgctgatgaaatgggttta
ggaaaaacattgcagtgtatttcgctcatctggaccctacagtgtcagggaccctatgga
ggcaagccagtaataaagaagacacttattgttacccctggaagcttggtgaagaattgg
agaaaagaatttcaaaaatggctgggaagtgaaaggatcaagatattcactgttgatcag
gaccataaagtcgaggagtttatcaattctacatttcattctgtccttatcatcagttat
gaaatgttacttcgttccctagatcaaattaagaccataacatttggccttctgatctgt
gatgaggggcaccgtttgaagaacagtagtatcaagacaacggcagccctttctagcctc
tcttgtgagaagagagtaattctcactggtaccccagttcagaatgatttgcaagagttt
tttgcattagttgattttgttaatccaggaatattagggtctctgtcgtcttataggaaa
atatatgaagaacccatcattgtgtcaagagagccttcttcttctgaggaagaaagggag
ttaggggagagaagagcagctgagctcacacgcctcactggacgtttcatccttagaaga
actcaggaagtcatcaataaatatctcccccctaaggtagagaatgtagtcttttgccga
ccaggagcattgcagattgaactttaccgaaagctcctcagttctcagtctgtcaggttc
tgtctgcaaggactactggaaaatagcgctcacctcatctgcatcggagccctaaagaag
ctgtgcaatcacccttgcctcttgttcagctctgtgaagggtaaagaatttagctcaagt
tgtgaagaaaatgaagaaaggaatctatgccaaggcttgctgacggtgttccctgctggc
tacaaccctctgcagttctctgagaatgagtcaggaaaactgcaggtgttagggaagctc
ctggcagtgatccgtgaactccgtcccactgaaaaagtgattttggtatccaactacaga
caaaccttgaatatcttagaagaagtttgcaagcgtcacggatatgcttgtgcaagactt
gatggccagacaccagtctctcaaaggcagcaaattgttgatagtttcaatagtacatac
tctactgattttgtttttttattaagttcaaaagctggtggtgtgggacttaatcttatt
ggaggatctcacttaattctctatgatatcgattggaacccagctactgacatccaggct
atgtctagagtatggagagatggtcagaaacatcctgtgcatatttacagactcctgact
acagggacaatagaggaaaagatatatcaaaggcagatcagtaagcagggcctttctggg
gccgtcgtagacctaaccagatcatctgaacacatccagttttcagtggaagagcttaaa
aacttgttcacattacacgaaaattcacagtgtgttacccatgacctgcttgactgtgag
tgcacagggggagaagatcacaccgatgatgcgctggaaggccctgtcacctctagacag
tgtcagctcggccctcagaagtctaactccttgagacctctgtccatgtcacagctgaag
caatggaaacatttttctggagaccatttaaatcttccagacccatttcttgaaagaata
agagaaaatgtgtcgttctttttccagaatataaccaaccaagctcctgcaatctaa
DBGET
integrated database retrieval system
