Arvicanthis niloticus (African grass rat): 117698901
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Entry
117698901 CDS
T08817
Symbol
Trim66
Name
(RefSeq) tripartite motif-containing protein 66 isoform X1
KO
K12032
tripartite motif-containing protein 66
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117698901 (Trim66)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117698901 (Trim66)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
PHD
zf-B_box
zf-RING_5
Prok-RING_4
ANCHR-like_BBOX
DUF7479
Motif
Other DBs
NCBI-GeneID:
117698901
NCBI-ProteinID:
XP_034346354
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All DBs
Position
1:complement(77262389..77316842)
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AA seq
1347 aa
AA seq
DB search
MGPSLGMSFPRQPLCSTDECVEAVVRTCSKCGRDLRAEGSRLLPCQHLLCKDCFQGFMRE
LGHVTRAYGTTPGELISCPGCQRVYLTRDVTEHIFLQRVSSVKPTMARNCSECKEKRAAH
ILCTYCNRWLCSSCTEEHRHVPAPGGPLFARAQKGSSGVNSGSGDFALYCPLHTHEVLKL
FCETCDVLTCHSCLMVEHKEHRCRHVEEVLQNQRMLLESVTTQVAHKKSGLQTSAKQIED
RIFEVKHQHRKVENQIKMAKMVLMNELNKQANGLIEELEGITNERKRKLEQQLQSIMVLN
RQFEHVQNFINWAVCSKTSVPFLFSKELIVFQMQRLLETSCNTDPGSPWSIRFTWEPNFW
TKQLASLGCITTEGGQLTRADAAAASYGSLQGQSSFYQSHQAPMAQQEALSHPSHKFQSP
ALCSSSVCCSHCSPVSPSLKGQIPPPSIHPAHSFCQPSEMVPHQLGPLQCSTLLPREKEL
ACSPHPPKLLQPWLEPQPPAEQESPSQRPGQQLVSQPVCIVPPQDVQPGAHAQPTIQTPS
IQVQLGHHQKLKLSHFQQQPQQQPPPPPPPPPPPPQHAPPPLPPSQHLASSQHESPPGPA
CSQNVDIMHHKFELEEMQKDLELLLQAQQPSLQLSQTKSPQHLQQTIVGQINYIVRQPAP
VQSQSQEDTLQVTEEPPASEGPKPALPVEKNTAAPLPQTSGEETPHNVPPVDSTSQHSSP
NVLRKHATSVSIMGFSNTVEMELSSTRLARAIEPQIHRVSSLAAPTHTIPSLLSGPPQTV
SNLMSVSNHVMPSLTASHLQPVPNLVRGTFQSTPNPRGDSSQAITSLASTHSQAGPSLMS
GHTQATPSLATCPLQGMPPVSDVHVETRSISSPGSGPTAERLGPRDGTESSLGNALCKME
SEDCTRFTDSVGQCPTASSLDAPKDLAIPSELEEPINLSVKKPFLAPAINTSTALQQYRS
PKEYENFEQGALELDTKENSDIRAISSEPKIPYVRLERLKICAASSGEMPVFKLKPQKNS
EDGSFLLVIECGTESSSMSIKVSQNSLPDATQGPGLGGRKVTVTSLPGQRPLEVDSTSEE
HRLIPRTPGAKKITPAPIENEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEW
VCTLCRSLTQPEMEYDCENARYSHSGVRALPGLSTYDQKKCEKLVLSLCCNSLSLPFHEP
VSPLARHYYQIIKRPMDLSIIRRKLQKKDPAHYTTPEEVVSDVRLMFWNCAKFNYPDSEV
AEAGRCLEVFFEGWLKEIYPDRCFAQPQQEDSDSEDVSGESGCSTPQGFPWPPYMQEGIQ
PKRRRRHMENEKTKRVSFRLANSISQV
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgggcccaagcctgggtatgagttttccaaggcagccactctgctctacagatgaatgt
gtggaggccgtggtacggacctgctctaagtgtggacgagacctacgagctgagggttct
cggcttttaccgtgccaacatctgctctgtaaggattgcttccagggcttcatgcgggag
ctagggcatgttaccagggcttatgggacaaccccaggtgagctcatctcctgtcctgga
tgtcagcgtgtctatcttaccagagatgtaactgaacatatttttcttcagcgtgtttct
tctgtgaaacccacaatggccaggaactgctcggagtgcaaggagaagcgggcggcacac
atcctctgcacgtactgcaaccgctggctgtgcagctcctgcacagaggagcaccggcat
gtcccagccccggggggcccactctttgcacgggcacagaagggatcctcaggggtgaat
agtggctctggggacttcgccttgtattgccctctgcacacacacgaggtgctcaagctc
ttctgcgagacttgcgacgtgctcacctgccacagctgcctaatggtggaacacaaagag
cacagatgcagacacgttgaagaagttctacaaaaccagaggatgcttctggaaagtgtg
actactcaggtggcacataagaaatccggcctacagacatctgcgaagcaaattgaggac
aggatttttgaagtgaagcatcagcacaggaaggtggaaaaccagatcaaaatggccaag
atggtcctcatgaatgagctgaacaagcaagccaatggcctcatagaggagctcgagggc
attactaatgagagaaagcggaagctggagcagcagctacagagcatcatggttctcaac
cgtcagtttgagcacgtgcagaatttcatcaattgggccgtctgcagcaaaaccagtgtc
cctttccttttcagcaaagagctgattgtgtttcagatgcagcggttgctggagacgagt
tgtaacacagatcctggctctccttggagtatcagattcacctgggagcccaacttctgg
accaagcagctggcttcccttggctgcataaccactgaaggtggacagctgacccgggca
gatgctgcggctgcctcttatgggagtttacaggggcagtcatccttttatcagagccac
caggctcccatggctcagcaggaggcactcagccacccctcacacaagttccagtctcca
gcactgtgctcctcctctgtctgctgctcccactgctccccagtctcgccttccctcaaa
ggccagatccccccacccagcatccacccagctcacagtttctgccagccttctgaaatg
gtaccccaccagctggggccgctgcagtgttccaccctgctgcccagggagaaagagctg
gcctgtagtcctcatccaccaaaactgctgcagccctggttggaaccacaacctcccgca
gaacaggagagtccatcccagcggccaggacagcagctggtttcccagcctgtgtgcatc
gtccctccgcaagatgtgcagccaggagctcatgcccagcccaccatacagacaccttcc
atccaagttcagctgggccaccatcagaagctaaagctcagccactttcagcagcagcca
cagcagcagccaccacccccaccacccccacctcctccacccccccagcatgcacctcca
cccttgcctccatcccagcacctggcttccagtcagcacgagagccctcctgggcctgcc
tgttcccagaatgtggacattatgcaccacaagtttgagctggaggagatgcagaaggac
ttggaacttctcctgcaggcccagcagcctagcctgcagttgagtcagaccaagtctcct
cagcatcttcaacaaaccattgtggggcagatcaactacatcgtgaggcagccagcacct
gtgcagtcccagagccaggaggataccctgcaggttacagaggagccaccagcgtctgag
ggcccaaagccagctctacctgttgagaagaatactgctgctcccttgccccagacatct
ggggaagaaactcctcacaatgtccctccagtggacagcacctcccagcactcttctcca
aacgtgttgagaaagcacgccacctcagtgagcatcatgggcttttccaacactgtggag
atggagttgtcgtctaccaggctggcgagggccatcgagccacagatccacagggtgagc
agcctggctgctcccacacacacgattccgagcttgctgagtggcccaccacaaactgtg
tccaacctgatgagtgtttcgaaccatgtgatgccaagcctgacagccagtcacctgcag
cctgtgccaaaccttgtgcgtggcacattccagtccacgcccaacccgaggggtgattcc
tcccaggccatcacaagcctggcgagcactcactcacaagctgggcccagtctaatgtct
gggcacacccaggctacaccgagtctggctacttgtcctctgcagggcatgcctccggtt
tctgacgttcatgtggagactagatccatatccagtcctgggtctggcccaactgcagag
aggctgggccccagggatgggactgagtcctccctggggaatgccttgtgtaagatggaa
agtgaggattgtacccgtttcacagactcagtaggacaatgccccacagcctccagtctg
gatgctccaaaggatttggctattccctcagaactggaggaaccaattaatctctctgtg
aaaaaacctttcctggcaccagcaatcaacacatctactgctctgcaacagtaccggagt
ccaaaagaatatgagaattttgaacaaggagccttagaactggatacaaaggagaattcg
gacatcagagctatcagtagtgagcccaagatcccctacgtgcgactggagcggctcaag
atctgtgctgcctcatcaggagagatgcctgtgtttaagctgaagcctcagaaaaatagt
gaggatgggagcttcctcctggtgatcgagtgtggcactgagtcctccagcatgtccatt
aaggtcagccagaacagcctgcctgatgccacccagggcccaggtcttgggggaagaaag
gtcactgtcacatctctgcctgggcagcggccactagaggtggacagcacatctgaggaa
cacagactcattccccgaactccaggagccaagaagatcaccccagcccccatagagaat
gaggacttctgtgccgtgtgcatcaatggcggggagcttctgtgctgtgaccgctgcccc
aaagtgtatcacctttcctgccacgtgccagccttgctcagcttcccagggggagaatgg
gtgtgcactctgtgccggagcctgacacagccggagatggagtacgactgtgagaatgcg
cgctacagtcactctggagtgcgggcacttcctggcttaagcacgtatgaccagaagaag
tgtgagaagctggtcctgtcactgtgctgcaacagcctcagcctgcccttccacgaacca
gtcagtcccctggccaggcattattaccagatcatcaagaggcccatggacctgtcaatc
atccggaggaaactgcaaaagaaggacccagctcactacaccactccagaggaagtggtg
tcagatgtgcgcctcatgttctggaactgtgctaagttcaattatcctgactcggaggtt
gcagaggctggtcgctgtctggaagtgttctttgagggctggctaaaggagatctaccca
gacagatgctttgcccagccccaacaagaggattcagactctgaggacgtatctggcgag
agtggctgctctacccctcagggcttcccgtggcctccctacatgcaggaaggcatccag
cccaagaggcgacggcggcatatggagaatgagaagacaaagagagtgtcgtttcgtctg
gccaacagcatctcgcaggtgtga
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