Arvicanthis niloticus (African grass rat): 117698907
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Entry
117698907 CDS
T08817
Symbol
Ncam1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
anu04514
Cell adhesion molecule (CAM) interaction
anu04517
IgSF CAM signaling
anu05020
Prion disease
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
117698907 (Ncam1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117698907 (Ncam1)
04517 IgSF CAM signaling
117698907 (Ncam1)
09160 Human Diseases
09164 Neurodegenerative disease
05020 Prion disease
117698907 (Ncam1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117698907 (Ncam1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117698907 (Ncam1)
04090 CD molecules [BR:
anu04090
]
117698907 (Ncam1)
00536 Glycosaminoglycan binding proteins [BR:
anu00536
]
117698907 (Ncam1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
anu00537
]
117698907 (Ncam1)
04091 Lectins [BR:
anu04091
]
117698907 (Ncam1)
Membrane trafficking [BR:
anu04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
117698907 (Ncam1)
Cell adhesion molecules [BR:
anu04515
]
Immunoglobulin superfamily
NCAM1/2
117698907 (Ncam1)
CD molecules [BR:
anu04090
]
Proteins
117698907 (Ncam1)
Glycosaminoglycan binding proteins [BR:
anu00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
117698907 (Ncam1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
anu00537
]
Others
117698907 (Ncam1)
Lectins [BR:
anu04091
]
I-type lectins (Siglecs)
117698907 (Ncam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_6
Ig_5
C1-set
C2-set_3
Adeno_E3_CR1
Zwei_Ig_N
V-set_CD47
Ig_PDGFR_d4
Collagen_bind_2
Motif
Other DBs
NCBI-GeneID:
117698907
NCBI-ProteinID:
XP_034346357
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MLQTKDLIWTLFFLGTAVSLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGE
KLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMF
KNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIK
KTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGF
PEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDAS
IHLKVFAKPKITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTRNISSEEKASWTRP
EKQETLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYAPKLQ
GPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPD
SENDFGNYNCTAVNRIGQESLEFILVQADTPSSPSIDRVEPYSSTAQVQFDEPEATGGVP
ILKYKAEWKSLGEEAWHFKWYDAKEANMEGIVTIMGLKPETKYTVRLAALNGKGLGEISA
ATEFKTQPVHSLPPQGEPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVKYRAKVA
SEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTSAQPTAIPANG
SPTTGLSTGAIVGILIVIFVLLLVAMDITCYFLNKCGLLMCIAVNLCGKAGPGAKGKDME
EGKAAFSKDESKEPIVEVRTEEERTPNHDGGKHTEPNETTPLTEPELPADTTATVEDMLP
SVTTVTTNSDTITETFATAQNSPTSETTTLTSSIAPPATTVPDSNSVPAGQATPSKGVTA
SSSSPASAPKVAPLVDLSDTPTSAPSASNLSSTVLANQGAVLSPSTPASAGETSKVPPTS
KASPAPTPTPAGAASPLAAVAAPATEAPQAKQEAPSTKGPDPEPTQPGTVKSPPEAATAP
ASPKSKAASVSTTNPSQGEDLKMDEGNFKTPDIDLAKDVFAALGSPAPATGASGQASELA
ASTADSAVPPAPAKTEKGPVETKSEPQESEAKPAPTEVKTVPNEATQTKENESKA
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaactaaggatctcatctggactttgtttttcctgggaactgcagtttccctg
caggtagatattgttcccagccaaggagaaatcagcgttggagagtccaagttcttcctg
tgccaagtggcaggagatgccaaagataaggacatctcctggttctcccccaatggggag
aagctgagcccaaaccagcagcggatctcagtggtgtggaatgatgacgactcctctacc
ctcaccatctacaatgccaacatcgacgatgctggcatttacaagtgtgtggtcaccgcc
gaggatggcacccagtcggaggccactgtcaacgtgaagattttccagaagctcatgttc
aagaatgccccaactccacaggagtttaaggaaggggaagatgctgtgattgtctgtgat
gtggtcagctctctgcccccaacaatcatctggaaacacaaaggccgagatgtcatcctg
aaaaaagatgtccggttcatagtcctgtccaacaactacctgcagatccggggcatcaag
aaaacagacgagggcacttaccgctgtgagggcaggatcctggcccggggggagatcaac
ttcaaggacattcaggtcattgtgaatgtaccacccactgtccaggccagacagagtatc
gtgaatgccactgccaacctgggccagtctgtcaccttggtgtgtgatgctgatggcttc
ccagagcccaccatgagctggacaaaggatggggaacccatagagaatgaggaggaagat
gatgagaagcacatcttcagtgatgacagttctgagctgaccatcaggaatgtggacaaa
aacgacgaggccgaatacgtctgcatcgctgagaacaaggctggcgagcaggatgcctcc
atccacctcaaggtctttgcaaagcccaaaatcacctatgtagagaatcagacagccatg
gaactagaagagcaagtcactctgacctgcgaggcctctggagaccccatcccctccatc
acctggagaacgtctacccgaaacatcagcagtgaagaaaaggcatcgtggactcgacca
gagaagcaagagactctggatgggcacatggtggtacgcagccatgcccgtgtgtcctcc
ctgacactgaagagcatccagtacacagatgctggagaatatatctgcactgccagcaac
accatcggccaggactcccaatccatgtaccttgaagttcaatatgctcccaagctccag
ggccctgtggctgtgtacacttgggaagggaaccaggtgaacatcacctgtgaggtcttc
gcctacccgagtgccaccatctcctggttccgagatggtcagctgctgccaagctccaac
tacagcaacatcaagatctacaacaccccttcggctagctacctggaggtaacccctgat
tcagaaaatgactttggaaactacaactgtacagcagtgaaccgtattggacaggagtcc
ttggaattcatccttgttcaagcagacacgccatcttctccatccattgaccgggtggaa
ccatactccagcacagcacaggtgcaatttgatgagccagaggccacaggtggagtgccc
atcctaaaatacaaggctgagtggaagtcgctgggtgaagaagcatggcatttcaagtgg
tatgacgccaaagaagccaacatggaaggcattgtcaccatcatgggcctgaagcctgag
acaaagtacacggtacggctggcggccctcaacggcaaggggctgggcgaaatcagtgca
gctactgagttcaagacacagccagtccacagccttcctccacaaggggaacccagtgca
cccaagctggaagggcagatgggagaggacgggaactccatcaaggtgaacctgatcaaa
caggatgacggaggctcccccatcagacactatctggtcaagtacagagcgaaggtcgcc
tctgaatggaaaccagaaatcaggctcccatccggcagtgaccacgtcatgctcaagtcc
ctggactggaacgccgagtatgaagtatatgtggtagctgagaaccagcaaggaaaatcc
aaggcagctcattttgtgttcaggacctcagcccagcccacggccatcccagccaatggc
agccccaccacaggcctgagcacaggcgccattgtggggatcctcattgtcatcttcgtc
ctgctcctggtggccatggacataacctgctacttcctgaacaagtgtggcctcctcatg
tgcatcgctgtgaacctgtgcggcaaagctgggcccggagccaagggcaaagacatggag
gagggcaaggctgctttctcgaaagatgaatctaaggaacccattgtggaggtccgaaca
gaggaggaacggactccaaaccatgatggagggaagcacacggagcccaacgagaccacg
ccgctgacagagcccgagctgcctgccgacaccacagccactgtcgaggacatgctgcct
tctgtcaccaccgtcaccactaactctgacactatcaccgaaacctttgccactgctcag
aacagccctaccagtgagaccactacactgacctccagtattgccccaccggccacaact
gtgccagactcaaattctgtgcccgctggtcaggccaccccttccaagggtgtcactgct
tcatcctcttccccagcctcagccccaaaagttgctcctcttgttgacctgagtgatacc
ccaacctcggctccctctgctagcaatctgtcctctactgtcctggcaaaccaaggagct
gtactcagtcctagcacacctgccagtgcgggagagacctccaaggtccctccaaccagt
aaggcctccccagctcccacccctactccagccggggcagccagccccttagcagcagta
gccgcccctgccacagaagccccccaggccaagcaggaagcccccagcaccaaaggtccg
gacccagagcccacccagcctggcaccgtgaagagcccacctgaggcagccacagcccct
gctagcccgaagagcaaggctgcctccgtcagcaccacaaacccttcccagggcgaggac
ttaaaaatggacgaagggaacttcaagaccccagatattgaccttgcaaaggatgttttt
gcagccctgggttctcctgctcccgccactggggccagtggacaagcctctgagcttgct
gcttccactgcagacagcgctgtgcctcctgcaccagcaaagaccgagaagggtcccgta
gaaacaaagtctgagccccaggagtcagaagcaaagccagcgccaactgaagtcaagacg
gtccccaatgaagccacacaaacaaaagagaatgagagcaaagcatga
DBGET
integrated database retrieval system
