Arvicanthis niloticus (African grass rat): 117698910
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Entry
117698910 CDS
T08817
Symbol
Dmxl2
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117698910 (Dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117698910 (Dmxl2)
Membrane trafficking [BR:
anu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117698910 (Dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
117698910 (Dmxl2)
RAVE complex
117698910 (Dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
117698910
NCBI-ProteinID:
XP_034346377
LinkDB
All DBs
Position
Unknown
AA seq
3052 aa
AA seq
DB search
MHLHQVLTGAVNPGDNCYSVGSVGDVPFTAYGSGCDIVILASDFECVQIIPGAKHGNIQV
SCVECSNQHGRVAASYGNAVCIFEPLGINSHKRNSQLKCQWLKTGQFFLSSVTYNLAWDP
QDNRLLTATDSIQLWAPPGSDILEEEEEVDNKVPPVLNDWKCIWQCKTSVSVHLMEWSPD
GEYFATAGKDDCLLKVWYPMTGWKSSIIPQDPHEVKRRRACTQFSFVYLAHPRAVTGFSW
RKTSKYMPRGSVCNVLLTSCHDGVCRLWAETLLPEDCLLGEQICETTTSSVASNLSPTGK
HKDRIQHALETIHHLKNLRKGQRRSSVLVTHAELMPDKTATHEVHRHISHHANALCHFHI
AASINPSTDIPNVLVGTAFNIDDINGGFVVHWLNNKEFHFTLSTEIFMHQLRKLSEKQLD
HESDDADREDEERSQEERERGLRMKLDHELSLDRESEAGTGSSEHEDGEREGSPRTHPRP
SISMPLPTVLLDRKIEMLLTEWNKNPDMLFTIHPVDGTFLVWHVKYLDEYNPGIFRQVQV
SFSSRIPVAFPSGDANSLSKNIMMYACVNATKDSYTTPSQQEMMSVDNPHGSQPHSTSHS
IDMNILAPTVMMVSKHIDGSLNQWAVTFADKSAFTTVLTVSHKFRYCGHRFHLNDLACHS
VLPLLLTSSHHNALLTPESDCQWDSDSKLNRLIDPVKHTKGSSKQPLRNAATRTFHDPNA
IYSELILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPSYCLGTYCNSASA
CFVASDGKNLRLYQAVVDARKLLDELSDPEASKLIGEVFNIVSQQSTARPGCIVELDAIT
DQCGSNTQLLHVFQEDFIIGYKPHKEDMEKKEKETEIFFQPSQGYRPPPFSEKFFLVVIE
KDGNNNSILHMWHLHLKSVQACLAKAAEGISSDSLLSVPGQKNLDSSPETSSSVSSMPHS
SSIANLQTASKLILSSRLVYSQPLDLPEAVEVIRATPSAGHLSSSSIYPVCLAPYLVVTT
CSDNKVRFWKCCMETNSLGNTSDENETYHWRRWPLMNDEGEDNSSTVSIVGRPVAVSCSY
TGRLAVAYKQPVHHNGFISKEFSMHVCIFECESTGGSEWVLEQTIHLDDLVKVGSVLDSR
VSVDSNLFVYSKSDAFLSKDKYLIPNIKHLVHLDWVSKEDGSHILTVGVGANIFMYGRLS
GIVSDQTNSKDGVAVITLPLGGSIKQGVKSRWVLLRSIDLVSSVDGTPSLPVSLSWVRDG
ILVVGMDCEMHVYAQWKHSVKFGDIEADSPVEETIMQDHSAFKSSVLARKSIVEGAAIPD
DVFCSPTVVQDGGLFEAAHALSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCIAGEV
AIVRDPDTGEGTKRHLSRTISVSGSTAKDTVTIGKDGTRDYTEIDSIPPLPLHALLAADQ
DTSYRISEDNTKKPQSYEDKIESQPEDQYSELFQVQEITTDDIDLEPEKRENKSKVINLS
QYGPAYFGQEHARVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSTELDENRDKNYSGR
DTLDECGLRYLLAMRLHTCLLTSLPPLYRVQLLHQGVSTCHFAWAFHSEAEEELINMIPA
IQRGDPQWSELRAMGIGWWVRNVNTLRRCIEKVAKAAFQRNNDALDAALFYLSMKKKAVV
WGLFRSQHDEKMTTFFSHNFNEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIE
VCLEKMEDIQLAMVIARLFESEFETSSTYISILNQKILGCQKDGTGFNCKRLHADPFLRS
LAYWVMKDYTRALDTLLEQTPKEDDEQPVIIKSCNPVVFSFYNYLRTHPLLIRRNLASPE
GTLATLGLKTEKNIADKINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKISSLTA
KKDQLDFVSERMENGPSESKPVSSSDGGSGADWSAVTSSQFDWSQPVVTVDEEPLRLDWG
DDHEEDDGGGLVMKATDAKKAGQDQSAADPSALLTPQEEECAEGDSEVDVIAEQLKFRAC
LKILMTELRTLATGYEVDGGKLRFQLYNWLEKEIAALHEICNHESVIKEYSSKAYSKVES
ELLDQEEMVDKPDIGSYERHQIERRRLQAKREHAERRKLWLQKNQDLLRVFLSYCSLHGA
QGGGLASVRMELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASIASTKTVIANPVLYLN
NHIHDILYTIVQMKTPPHPGVEDVKVHTLHSLAASLSASIYQALCDSHSYSSQSEGNQFT
GMAYQGLLLSDRRRLRTESIEEHATPNSAPAQWPGVSSLINLLSSAQDEDQPKLNVLLCE
AVVAVYLSLLIHALATNSSNELFRLAAHPLTNRMWAAVFGGGVKLVVKPRRQSESMAAPP
AASEDIDKHRRRFNMRMLVPGRPVKDATPPPVPAERPSYKEKFIPPELSMWDYFVAKPFL
PLSDSGVIYDSDESVHSDDEEDDAFFSDTQIQEHQDPNSYSWALLHLTMVKLALHNIKNF
FPIAGLEFSELPVTSPLGIAVIKNLENWEQILQEKMDHFEGPPPNYVNTYPTDLSVGAGP
AILRNKAMLEPENTPFKSRDSSALPVKRLWHFLVKQEVLQETFIRYIFTKKRKQSESVEE
HVEQVKHNSVAEDCHIKVEADLGYPGGKAKVIHKESDMIMAFSINKANCNEIVLASTHDV
QELDVTSLLACQSYIWIGEEYDRESKSSDDIDYRGSTTTLYQPGAASHSSSQAHPPPSLP
WLGSGQTSTGATVLMKRNLHNVKRMTSHPVHQYYLTGAQDGSVRMFEWTRPQQLVCFRQA
GNARVTRLYFNSQGNKCGVADGEGFLSIWQVNQTASNPKPYMSWQCHSKATSDFAFITSS
SLVATSGQSNDNRNVCLWDTLISPGNSLIHGFTCHDHGATVLQYAPKQQLLISGGRKGYI
CIFDIRQRQLMHTFQAHDSAIKALALDPCEEYFTTGSAEGNIKVWRLTGHGLIHSFKNEH
AKQSIFRNIGAGVMQIDVSQDNRLFSCGADGTLKTRVLPSAFNIPNRILDIL
NT seq
9159 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcatcaggtcctcaccggggctgtcaaccctggagacaactgctattcggtg
ggcagcgtcggggacgtccccttcacggcatatggatcaggctgtgacattgttattctg
gcgagtgactttgaatgtgtgcagatcatccctggtgctaagcatggaaacatccaagtc
agttgtgtggaatgctccaaccaacatggaagagttgcagcttcatatgggaatgctgtg
tgtatttttgagcccctgggtataaattctcataagagaaacagtcaactcaagtgtcag
tggcttaaaactgggcagttttttttgagttccgtgacatacaacttagcatgggaccct
caagataacagattgctgacagcaactgattcgattcagctgtgggctcctccaggcagt
gatattctagaagaggaggaagaagtcgataataaagtccctcctgttttaaatgattgg
aagtgcatctggcagtgcaaaacctcagtgtctgtacatctgatggaatggtctcctgat
ggtgaatattttgctactgctggaaaggatgattgtcttctgaaagtgtggtaccctatg
actggctggaagtcttcaatcatacctcaagatcctcatgaagtgaaaaggagacgggct
tgcactcagttctcctttgtttacttggcacaccctcgagccgtgacaggtttctcatgg
cggaaaactagcaagtatatgcccaggggctctgtctgtaatgtcttactgacttcatgt
catgatggtgtgtgtcggctctgggcagaaacattgttacctgaagactgccttttgggt
gagcagatttgtgagaccactacctccagtgttgccagcaacctttctcctactggaaaa
cacaaagacagaatccagcatgctcttgagacaatacaccatttgaagaatttaaggaaa
ggacaaaggagatcttctgttcttgtaactcatgctgaactgatgcctgacaagaccgca
acccacgaggttcacagacacatttctcaccatgccaatgcactgtgccactttcatatc
gcagcaagcatcaatccttccacagatattccaaatgttctggttggcacggcatttaat
attgatgatatcaatggaggatttgtagttcattggttaaacaacaaggaatttcatttt
acattatcaactgaaatatttatgcaccaattacgaaaactttctgaaaaacaattagat
catgaaagtgatgatgcagatagagaagatgaggaacgctcacaggaggagagagagagg
ggtttacgaatgaaactggaccatgaattatctctggatagagaatctgaggcaggtaca
ggatcatcagaacatgaagatggagaacgagagggaagtcctagaacccatccccgacct
agcatctcaatgccgctgcctacagtgctgctggatcggaagattgaaatgctgctgaca
gagtggaataagaacccagacatgttattcacgatacaccctgtagatgggactttccta
gtgtggcatgtgaagtatctggatgaatataaccctggaatatttagacaagttcaggtt
tctttttcctctcggattcctgttgcatttccctctggggatgccaactctcttagtaaa
aacatcatgatgtatgcttgtgtaaatgccacaaaagattcatacaccaccccatcacag
caagagatgatgtctgtagataatcctcacggatcacagccacactctacatcacacagc
attgatatgaacattttagcgcctacggtaatgatggtctcaaaacacatagatgggtct
ttgaatcaatgggcagtcacatttgctgataagtcagcctttaccactgttctgactgta
tcccacaaattcagatactgcggtcaccgattccacctcaacgatttggcttgccattcc
gttttacctctgttgctgacatcttcccatcataatgctctattgactcctgaatcagac
tgtcagtgggactcggacagtaaattaaatagattaatagatcctgtaaaacacacaaaa
ggttcatcgaaacagcctcttagaaatgcagcaacccgtacatttcatgacccaaatgcc
atctacagtgaactgattctgtggcgtgtagaccccattggacctttgtcatatactgga
ggagtgtcagaattggctcgaattaactctttacatacctcagccttctccaatgtggca
tggcttccaactcttattcctagttattgtcttggcacatattgcaattctgcaagtgct
tgctttgttgcatctgatggcaaaaatctaagactctatcaagctgtggttgatgcaaga
aaattattagatgagctatcagacccagaagcctcaaaacttatcggagaagtgtttaac
attgtgagccaacagtccactgctcggccaggctgcatcgttgaactggatgcaatcact
gaccaatgtggttcaaatacacagctactgcatgtgtttcaagaagacttcattattgga
tataaaccacacaaagaagatatggagaaaaaggaaaaggaaacagaaatatttttccaa
ccatcacaaggatatcgtccaccaccattttcagaaaaattctttttagtagtcattgag
aaagacggtaataataactctattctccatatgtggcaccttcatcttaaatctgtacaa
gcatgtttagccaaagctgcagagggcatctcatccgacagtctgctttcagtcccggga
cagaagaacttggactcttctccagaaacctcctctagtgtgagctctatgccacattcc
tcatcaattgctaatcttcaaactgctagtaaacttattctgagctccagacttgtatat
agccagcccctggatctgccagaagctgttgaagtaataagagcaacaccttcagcaggt
catctgagttcctcttcaatttatccagtgtgccttgcaccttatttagtggttacaact
tgctcggacaataaagtgcgcttctggaaatgttgtatggaaactaactcactgggcaat
acaagtgatgagaatgagacctatcattggaggagatggcccttgatgaatgatgaggga
gaagataacagcagtactgtgagcatcgtgggaagacctgttgctgttagctgctcatat
acaggccgtcttgcagtggcttacaagcagcccgtccaccacaatggttttatttctaaa
gagttctctatgcatgtctgtatatttgaatgcgaatctacaggaggatcagaatgggtt
ttagaacagacgatccatctggatgatttggttaaggttggaagtgtacttgattcaagg
gtcagtgttgacagtaatctgtttgtgtatagcaaatcagatgcatttttaagtaaggat
aaataccttattccaaatatcaagcatttagtacatttggactgggtgtcgaaagaagat
ggctctcacatcctcacagtgggggttggtgctaatatcttcatgtatgggagactttca
ggaattgtaagtgatcagaccaacagtaaggatggagtagctgtcattactttaccacta
ggtggtagtatcaagcaaggagttaagtcaagatgggttcttctgagatctatagactta
gtatcctctgtggatggtaccccttcattgcctgtttctctctcttgggtaagagatgga
atattggtggtgggaatggattgtgaaatgcatgtatatgcccaatggaaacattctgtc
aaatttggagacattgaagctgatagtcctgttgaagagacgataatgcaagatcattct
gcctttaaatcctctgtgttggcaaggaaaagtattgttgaaggagcagctatccctgat
gatgttttctgttcaccaactgtggttcaagatggtggcttatttgaggctgcacatgcg
ctttctcctactctgccacagtatcatccaactcagctattagaattgatggacttaggg
aaagttagaagagctaaggccattctttcccatttagtaaagtgcattgcaggtgaagtt
gcaatagttcgggatcctgatactggagaaggaactaagcggcatctctctcgaaccatt
agtgtgagtggcagtacagcgaaggatacagttaccattggaaaggatggtactcgagat
tataccgagatagactctattcctccactaccactacacgcattacttgctgcagaccag
gacacatcctacagaatttcagaagacaatacaaaaaagccacagagctatgaggacaaa
attgaaagccaaccagaggatcaatattcagaactgttccaagtccaggagataacaaca
gatgatattgatttagagccagaaaagagagagaacaaatcaaaagtaataaacctgtca
cagtatggaccagcttattttggccaggaacatgctagagtactttcaagtcatctaatg
cactcaagtctaccaggccttacccgcttggagcagatgttccttgtagcactggctgat
actgtggcaaccaccagtactgagcttgatgaaaacagggataagaactactcaggaaga
gacaccttagatgagtgtggtttgagatacttgttagcaatgcgcttgcacacatgcctg
ttaacatcactgcctcctttataccgagtccagctccttcaccaaggagtgtctacctgc
cactttgcctgggcttttcattctgaagctgaggaagaactgatcaatatgattccagca
attcaaagaggggaccctcagtggtctgaattaagagctatgggaataggctggtgggtg
aggaacgttaacacacttcgaagatgcattgaaaaggttgccaaagctgcttttcaaagg
aacaatgatgccttagatgctgctttattctacctttccatgaagaagaaagcggtagtg
tggggtctgttcaggtcacaacatgatgaaaaaatgacgacatttttcagccacaacttt
aatgaagatagatggcggaaagctgctttgaaaaatgccttttctttacttggaaaacag
cgctttgaacaatctgctgcttttttcttgttagctggttcattgaaagatgcaatcgag
gtatgtcttgaaaaaatggaagatattcaactagccatggttattgcccgtttatttgaa
tctgaatttgagacttcatctacttacatatccatcttgaatcagaaaattttgggttgt
caaaaagatggcacaggattcaattgcaagagattacatgctgacccttttctgcgtagt
ctcgcctattgggtgatgaaagattatacccgagccttggataccttactggaacagacg
ccaaaggaagatgacgagcaaccagttatcatcaaatcttgtaaccctgtggtgttcagt
ttttacaactaccttcgaacacatcctttacttattcgaagaaaccttgcttcccctgaa
ggaactttggcaactttaggtctcaaaactgagaaaaacattgctgataaaattaacctc
atagaaagaaaattattttttaccaccgctaatgctcattttaaagttggatgccctgtt
ttagcccttgaagtactttctaaaattcctaaagtcaccaaaatatcctccttaactgca
aaaaaagatcagcttgactttgtttctgaaaggatggagaacgggccatcagaatcaaaa
ccagtgagcagtagtgatggcggttctggggctgactggtcagccgtgacttcctcccaa
tttgactggagtcagccagttgtcacagttgatgaggaacctctgaggctcgattggggt
gatgatcatgaagaggacgatggcggtgggttagtaatgaaggctacagatgccaagaag
gctggacaggaccagagcgccgcagaccctagtgcattattgactcctcaggaagaggag
tgtgctgaaggtgacagtgaggtcgatgtgattgctgaacaactgaagttccgagcatgc
ttgaagatccttatgactgagttaagaactttggctacaggttatgaagtagatggaggg
aaactgagatttcagctctataactggcttgaaaaggaaattgctgccttgcatgagata
tgcaaccatgaatcagttatcaaagaatattctagcaaagcatattctaaagtagagagt
gaacttctggatcaggaagaaatggtggacaagccagatattggttcctatgaacgccac
caaatagaaagacgaaggttacaggctaaacgggaacatgcagaaagacgaaagctgtgg
ttgcagaaaaaccaggatctcctaagagtgtttctcagttattgtagccttcatggagcc
cagggcggtggtctggcctcagtaagaatggaactcaaatttttgctgcaagagtcacag
caggaaactacagtaaagcagctccagtctccactgccactacctaccacattgcctctg
ctttcagcaagtattgcatcgacaaaaacagtcatagctaatcctgtattgtatttaaat
aatcacatccatgatatactttatactattgtgcagatgaaaacaccacctcatcccggt
gttgaagatgtgaaggtgcacacacttcattcactagcagcgtcactttctgcatcaatt
taccaagcattatgtgacagccatagctacagcagtcagtcagaaggaaatcagtttaca
gggatggcttatcaagggcttcttctaagtgatcgacgccgactcaggacagaaagcatc
gaagagcatgcaaccccaaattcagctcctgcccagtggcctggtgtgagctcactcatt
aatctcttgagttctgcccaagatgaagaccagccaaaactgaatgttctgttgtgtgaa
gccgttgttgctgtttacttaagcttattgatacatgctcttgccacaaattcctccaat
gagttgttccggcttgcagcccacccattgactaatcgaatgtgggctgctgttttcgga
gggggtgtgaaacttgttgtgaagcctcggagacaatcagaaagtatggcagcacctcct
gcagcttctgaagacatcgacaaacaccgaaggagatttaacatgagaatgctggtacct
ggaaggcctgtaaaagatgccaccccacccccagtgcctgcagaaagaccgtcttacaag
gaaaaatttattcctccggaacttagtatgtgggactacttcgttgcaaagccatttctt
cctttgtctgatagtggtgtcatatatgattctgatgaaagtgttcacagtgacgatgaa
gaagacgatgcctttttttcagatacacagatacaggagcatcaggatcctaattcttat
agctgggctcttctgcatttgacaatggttaagctggcacttcacaatatcaagaatttt
tttcctattgctgggctggaattctctgagctccctgtgacatcaccgctaggaattgct
gtcattaaaaacttggagaactgggaacagattctgcaggagaaaatggatcactttgaa
ggtccgccccctaactatgtcaacacatacccaactgacctctcagtgggagctgggcca
gctattctccgaaataaagcaatgttagagcctgaaaatactccattcaaatctcgggat
tcgtctgcacttccagtcaaacgactctggcatttccttgtcaaacaggaagttcttcaa
gagacatttattagatacattttcactaagaagagaaagcagagtgagtctgtagaagaa
catgtggagcaggtcaaacacaactccgtagcagaagattgccacatcaaggtcgaagct
gacctgggctacccaggagggaaggcaaaggtcattcataaggagtctgacatgatcatg
gcattttctattaataaggcaaactgtaatgaaattgttttggcttcaacacatgatgtt
caagaactcgatgtcacttctctactggcttgtcaatcatatatatggattggagaagaa
tacgacagagagtcaaaaagttcagatgatattgattaccgtggctccaccacaaccctg
tatcagcctggtgcagcctcccattcttcaagccaggcgcacccgcctccatctttgcca
tggcttggcagtgggcagacaagcactggagctactgtgctcatgaaaaggaacctacat
aatgttaagagaatgacatcacaccctgtccatcaatactatctcacaggtgcccaggat
ggcagtgtgcggatgtttgaatggacacggcctcagcaactcgtctgtttccgtcaagct
ggcaatgcaagagttactagattgtattttaactcacaaggcaacaagtgtggtgttgca
gacggagagggttttctgagtatctggcaagttaaccaaactgcatcaaatcccaaacct
tacatgagttggcagtgccacagtaaggccacaagtgactttgcgtttatcacctcttca
agtctagttgcaacatctggacagtccaatgacaataggaacgtctgcctctgggacaca
ttaatatcacctggaaacagcctcattcatggttttacttgccatgaccacggtgccaca
gtacttcagtatgcccccaaacaacaacttttaatctctggaggtaggaaaggttacatc
tgcatttttgacatcagacagagacagctaatgcacaccttccaggcccatgactcggct
attaaggctttggctctggatccctgtgaggagtacttcactacaggctcagcagaaggc
aatattaaagtatggagattgacgggtcatggcctgattcactcgtttaagaacgagcat
gctaagcagtccatattccggaacataggagctggagtcatgcagattgatgtcagccag
gacaaccggctgttctcctgtggtgcagacggcacactgaaaaccagggttctgcccagt
gcttttaacatccctaatagaattcttgacattctgtag
DBGET
integrated database retrieval system
