Arvicanthis niloticus (African grass rat): 117698965
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Entry
117698965 CDS
T08817
Symbol
Dscaml1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117698965 (Dscaml1)
Cell adhesion molecules [BR:
anu04515
]
Immunoglobulin superfamily
DSCAM family
117698965 (Dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
Receptor_2B4
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
SseB
Motif
Other DBs
NCBI-GeneID:
117698965
NCBI-ProteinID:
XP_034346480
EnsemblRapid:
ENSANLG00005017969
LinkDB
All DBs
Position
Unknown
AA seq
2111 aa
AA seq
DB search
MTGAGEPRREEPPPCAGLRSRESGAPSAGGWERAERGRGAAARPATGPPPRRIGPLYGMW
LVTFLLLLDSLHKARPEDVGTSLYFVNDSLQHVTFSSSVGVVVPCPAAGSPSAALRWYLA
TGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENAAGKIRSPNIRIKAV
FREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSITPENRFFITSHGGL
YISDVQKEDALSTYRCITQHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWTGHA
VELPCAASGYPIPAIRWLKDGRPLPTDSRWAKRITGLTISDLRTEDSGTYICEVTNTFGS
AEANGVLTVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPGEAIS
IRGLSNETLLISSAQKSHSGAYQCFATRKAQTAQDFAIIVLEDGTPRIVSSFSEKVVNPG
EQFSLMCAAKGAPPPTVTWALDDEPVVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGV
YRCTARNSVGSAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYKDA
LLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPF
EFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSLK
HNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVM
WKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKAMF
LTVKIPAMITSHPNTTIAIKGHAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIATK
DNGDEVVSTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARS
MNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIRM
YSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGY
QIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEIN
ATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEM
QNVTTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAVPS
SASSVVVSWLPPTKPNGVIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQYL
LWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGDPAPAVK
WTKDSEDSAIPVSLDGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLVQV
PPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFKL
DSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQG
WNNGGCPITAIVLEYRPKGTWAWQGVRANSSTEVFLTELREATWYELRMRACNSAGCGNE
TAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFVVRKKRKEKRLK
RLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATI
PVTDAEFSQAVNPQSFCTGVSLHHPALIQSTGPLIDMSDIRPGTNPVSRKNVKSAHSTRN
RYSSQWTLTKCQASTPARTLTSDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVSTE
SASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTPS
EPGICRFTASPPKPQDADRGKNVAVPIPHRANKSDYCNLPLYTKSEAFFRKADGREPCPV
VPPREASMRNLTRAYHTQARHLTLDPASKPLGLPHPGATAATATATLPQRTLAMPAPPAG
TAPPAPGPTPSEPSAPPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTPGVGRSQKQG
AGTYSKSYTLV
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagccggggagccgaggagggaggagccgccgccgtgcgctgggctgaggagc
agagagagcggggcgccgagtgcgggcggctgggagcgcgctgagcgggggagaggcgct
gccgcacggccggccacaggaccacctccccggagaatagggcctctttatggcatgtgg
ctggtaactttcctcctgctcctggactctttacacaaagcccgccccgaggatgtcggc
accagcctctactttgtaaatgactccctgcagcacgtaaccttctccagctctgtgggt
gtggtggtgccctgcccggccgctggatcccccagtgcggctcttcgatggtacctggcc
acgggcgacgatatctacgatgtgccacacatccggcacgtccatgccaacgggactctg
cagctctaccctttctccccctctgccttcaatagctttattcacgacaatgactacttc
tgcaccgcagagaacgcagccggcaaaatccggagccctaacattcgcatcaaagcagtt
ttcagggaaccctacaccgtccgggtggaggatcaaaggtccatgcgtggcaacgtggct
gtctttaagtgcctcatcccctcttcagtgcaggaatacgttagtgtcgtgtcttgggag
aaagacacagtctccatcactccagaaaacaggtttttcatcacatcacacggtgggctg
tacatctcggacgtgcagaaggaagatgctctctccacctaccgctgcatcactcagcac
aaatacagtggggagactcgtcagagcaacggggctcgtctctctgtgacagaccctgca
gagtccatccccaccatcctggatggcttccactcccaggaagtgtggacgggccacgca
gtagaactgccctgtgctgcctctggataccccatccctgccatccgctggctcaaagat
ggcagacccctccctactgacagccgctgggctaagcgcattacagggctgaccatcagt
gacctgcgcactgaggacagcggcacctacatctgtgaggtcaccaacaccttcggatca
gcagaggccaacggcgtcctcacggtcatcgaccctcttcatgtgaccctgacaccaaag
aagctgaagacgggcatcgggagcacagtcatcctgtcctgtgcccttacgggctcaccc
gagttcaccatccgctggtaccgcaacacagaactggtcctgccgggtgaggccatctcc
atccgcgggctgagcaatgaaactctgctcatctcctcggcacagaagagccactcggga
gcctaccagtgcttcgccactcgcaaggcccagacagcccaggactttgccatcattgtg
ctggaagacggcacgccccgcatcgtctcatccttcagcgagaaggtggtcaaccctggg
gagcagttctcactgatgtgtgccgccaagggcgccccgccccccacggtcacctgggcc
ctggacgacgagcccgtcgtgcgggacggaagccaccgcaccaaccagtacaccatgtcc
gacggcaccaccatcagccacatgaacgtcacgggtccccagatccgggatgggggcgtg
taccggtgcacagcgcggaactcggtgggcagtgctgaatatcaggcgcgaataaacgta
agaggaccccccagcatccgggcaatgaggaacatcacggcagtcgcagggcgggacaca
ctcatcaactgcagggtcattggctacccctactactccatcaagtggtacaaggatgcc
ctgctgctaccggataaccaccgccaggtggtgtttgagaacgggactctcaagctgacg
gatgtgcagaagggcatggatgagggagagtacctgtgcagtgttctcatccagccccag
ctttccatcagccagagcgtccacgtggctgtcaaagtgccccctctgatccagcccttc
gagttcccccctgcctccatcggccagctgctctatatcccctgtgtggtgtcgtcgggg
gacatgcccatccgcatcacctggagaaaggacggacaggtgatcatctcaggctcaggc
gtgaccattgagagcaaggaattcatgagctccctgcagatctccagcgtctccctcaag
cacaatggcaactacacctgcattgccagcaacgcagcggccaccgtgagcagggagcgc
cagctcatcgtgcgtgtgccccctcgatttgtggtgcagcccaacaaccaggatggcatc
tacggcaaagctggtgtgctcaactgctcggtagatggctacccgccacccaaggtcatg
tggaagcatgccaaagggagtgggaacccccagcaatatcacccagtgcccctcactggc
cgcatccagatcctgcccaacagctccctgctgatacgccacgtcctggaagaggacatc
ggctactacctctgccaggccagcaacggcgtgggcaccgacatcagcaaggccatgttc
ctcaccgtgaaaatcccagctatgatcacatcccaccccaacaccacaattgccatcaag
ggccacgccaaggagctgaactgcactgcacgtggcgagcggcccatcataatccgctgg
gagaagggggacacagtcattgatcccgaccgtgtcatgcgctatgccatcgctaccaag
gataatggcgatgaggtggtctccacgcttaagctcaagccagctgaccgtggggactcc
gtgttcttcagctgccatgctatcaactcatatggagaggaccggggtttgatccagctc
actgtgcaagaaccccctgaccccccagaactggagatcagggaagtgaaggccaggagc
atgaacctacgctggactcagagatttgatggaaacagcatcatcactggctttgatatt
gaatataagaataaatcagactcctgggattttaagcagtccacacgcaacatctcccca
accatcaaccaggcgaacatcgtggacttacacccagcatccgtgtacagcatccgcatg
tactccttcaacaagattggacgcagcgagccgagcaaggagcttaccatcagtacagaa
gaggctgctcccgatgggcctcccatggatgtcaccttgcagccagtgacttcacagagc
atccaggtgacctggaaggcaccaaagaaggagctgcagaatggagtcatccggggatac
cagattggctacagagagaacagccccggcagcaatgggcagtacagtattgtggaaatg
aaagcgacgggggacagtgaagtctacaccctggataacctcaagaagttcgctcagtat
ggcgtggtggtccaagccttcaaccgggctggcacagggccctcatccagtgagatcaat
gccaccaccttggaggatgtgcccagccaacccccagagaatgtccgagctctgtccatc
acttctgacgtggctgtcatctcctggtcagagcccccacgaagcaccctcaacggtgtc
ctcaaaggctaccgagtcatcttctggtcactctatgttgatggagagtggggtgagatg
cagaatgtcaccaccacaagggagcgagtggagcttcggggtatggagaagttcaccaac
tacagcgtccaggtgctcgcctacacacaggctggggatggtgtgcgcagcagtgtgctc
tatatccagaccaaggaagatgttccaggcccccctgctggcatcaaagctgtcccttca
tcggctagtagtgtggtcgtgtcctggctgcccccaaccaagcccaatggggtgattcga
aaatataccatcttctgttccagccctgggtctggccagccggctcccagcgagtatgag
accagtcctgaacagctcttctacaggatcgcccacctgaaccggggacagcagtacttg
ctatgggtggctgcggtcacctctgcaggcagggggaacagcagcgagaaggtcaccatt
gagcctgctggcaaggccccagcaaagatcatctcattcggaggcactgtaaccacaccc
tggatgaaagatgtccggctgccttgcaattcagtgggggatcctgccccggctgtgaag
tggaccaaggacagtgaagactcagcaatccccgtgtccttggatggacaccggctcatc
cacacaaatggtacactgctgcttcgtgctgtgaaagcggaagactccggctattacacc
tgcacggccaccaacaccggtggctttgacaccatcatcgtcaaccttctggtacaagtt
cccccggaccagccccgcctcactgtctccaaaacctctgcctcttctatcaccctgacc
tggattccaggggacaatgggggcagctccatcagaggcttcgtgctgcagtactccgtg
gataacagcgaggagtggaaggatgtgttcatcagctccagcgagcgctccttcaagcta
gacagcctcaagtgtggcacgtggtacaaggtgaagctggcagccaagaacagtgtgggc
tctgggcgcatcagcgagatcatcgaggccaagacccatgggcgggaaccttccttcagc
aaagatcaacacctcttcacccacatcaactccacacatgctcggcttaacctgcagggc
tggaacaatgggggctgccccatcacagccattgtcctggagtaccggcccaaggggacc
tgggcctggcagggcgtccgagccaacagctccaccgaggtgtttctgacagaacttcga
gaggctacgtggtatgagctccgcatgagggcttgcaacagtgccggctgtggcaacgag
accgcccagtttgccaccctggactacgatggcagcaccatcccacccatcaagtctgct
caaggagaaggcgatgatgtgaagaagctgttcaccatcggctgtccagtcatcctggcc
acccttggggtagctctgctctttgttgtacgaaagaagaggaaggagaaacggctgaag
aggctccgagatgcaaagagtttggccgaaatgctgataagcaagaacaacagaagcttt
gacactcccgtgaaagggccaccccagggcccacggctccacatcgacatcccgagggtc
cagctgctcattgaagacaaggaaggcatcaagcagctgggagatgacaaggccaccatc
cctgtgactgatgctgagttcagccaagctgtcaacccgcagagcttctgtactggtgtt
tctttgcatcatccagccctcatccagagcacaggacccctcatcgacatgtcagacatc
cgaccaggaaccaatccagtgtccaggaagaatgtgaaatcagcccacagcacccgaaac
cggtactcaagccagtggaccttgaccaagtgccaggcttccacccctgcccggaccctc
acctccgattggcgcactgtgggttctcagcatggtgtcactgtcactgagagtgacagc
tacagtgccagtctatcccaagacacagacaaagggaggaacagtatggtgtccacggag
agtgcttcctccacctatgaggaattggcccgggcctacgagcacgccaagctggaggaa
cagctgcagcatgccaagtttgagatcacagaatgcttcatctcggacagctcctcggac
cagatgaccacaggcaccaacgagaacgccgacagcatgacgtctatgagtacaccctca
gagcccggcatctgccgcttcactgcctctccacccaagccgcaggatgctgacaggggc
aagaacgtggctgtgcccatccctcaccgagccaacaagagtgactactgcaacctacca
ttgtataccaagtcagaggccttcttccgaaaggcagatgggcgggaaccctgtcctgtg
gtcccaccccgagaggcctccatgagaaacctgactcgagcctaccatacccaggcccgg
cacctcactctggaccctgccagcaagcccttgggcctcccccatccaggggccactgct
gccaccgccacggccaccttacctcagaggactctggctatgccggcccccccagctggc
acagcacccccagcacctggccctactcccagtgagccctctgctccccctagtgctgcc
cctccggcccccagcactgaacctccacgggccggaggcccacacaccaaaatggggggc
tccagggactcactactagaaatgagcaccccaggggtagggcgttctcagaaacagggg
gctggaacctattccaaatcctataccctggtatag
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integrated database retrieval system
